RNA–Protein interactions for RNA: ENST00000527962.5

CTTN-212, Transcript of cortactin, humanhuman

TSL 2

Gene CTTN, Length 587 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-212ENST00000527962 PRSS50Q9UI38 385 aa13.93□□□□□ -0.18
CTTN-212ENST00000527962 PTGDR2Q9Y5Y4 395 aa13.93□□□□□ -0.18
CTTN-212ENST00000527962 SPIN1Q9Y657 262 aaPredicted RBP13.93□□□□□ -0.18
CTTN-212ENST00000527962 PCNX3Q9H6A9 2034 aa13.93□□□□□ -0.18
CTTN-212ENST00000527962 A0A1W2PNR3 127 aa13.92□□□□□ -0.18
CTTN-212ENST00000527962 CCT8L1PA6NM43 557 aa13.92□□□□□ -0.18
CTTN-212ENST00000527962 LSM1O15116 133 aaKnown RBP13.92□□□□□ -0.18
CTTN-212ENST00000527962 SCAMP2O15127 329 aaKnown RBP13.92□□□□□ -0.18
CTTN-212ENST00000527962 NDUFS7O75251 213 aa13.92□□□□□ -0.18
CTTN-212ENST00000527962 LYPLA1O75608 230 aaPredicted RBP13.92□□□□□ -0.18
CTTN-212ENST00000527962 PGM3O95394 542 aa13.92□□□□□ -0.18
CTTN-212ENST00000527962 AK1P00568 194 aa13.92□□□□□ -0.18
CTTN-212ENST00000527962 DHRS4L1P0CG22 281 aa13.92□□□□□ -0.18
CTTN-212ENST00000527962 EFNA1P20827 205 aaPredicted RBP13.92□□□□□ -0.18
CTTN-212ENST00000527962 FKBP2P26885 142 aaKnown RBP13.92□□□□□ -0.18
CTTN-212ENST00000527962 TOMM34Q15785 309 aaPredicted RBP13.92□□□□□ -0.18
CTTN-212ENST00000527962 TMEM249Q2WGJ8 235 aa13.92□□□□□ -0.18
CTTN-212ENST00000527962 TIGD2Q4W5G0 525 aa13.92□□□□□ -0.18
CTTN-212ENST00000527962 C6orf52Q5T4I8 152 aa13.92□□□□□ -0.18
CTTN-212ENST00000527962 FBXW9Q5XUX1 488 aa13.92□□□□□ -0.18
CTTN-212ENST00000527962 KANK2Q63ZY3 851 aa13.92□□□□□ -0.18
CTTN-212ENST00000527962 OR7E24Q6IFN5 339 aa13.92□□□□□ -0.18
CTTN-212ENST00000527962 OR10H5Q8NGA6 315 aa13.92□□□□□ -0.18
CTTN-212ENST00000527962 OR2T11Q8NH01 316 aa13.92□□□□□ -0.18
CTTN-212ENST00000527962 SLC25A43Q8WUT9 341 aaPredicted RBP13.92□□□□□ -0.18
CTTN-212ENST00000527962 ST8SIA1Q92185 356 aa13.92□□□□□ -0.18
CTTN-212ENST00000527962 APH1AQ96BI3 265 aa13.92□□□□□ -0.18
CTTN-212ENST00000527962 KLHDC3Q9BQ90 382 aa13.92□□□□□ -0.18
CTTN-212ENST00000527962 CACNG6Q9BXT2 260 aa13.92□□□□□ -0.18
CTTN-212ENST00000527962 SIRT3Q9NTG7 399 aaPredicted RBP13.92□□□□□ -0.18
CTTN-212ENST00000527962 TMEM160Q9NX00 188 aa13.92□□□□□ -0.18
CTTN-212ENST00000527962 DNAJC15Q9Y5T4 150 aa13.92□□□□□ -0.18
CTTN-212ENST00000527962 NBEAL1Q6ZS30 2694 aa13.92□□□□□ -0.18
CTTN-212ENST00000527962 IGHV4-30-2A0A087WSY4 118 aa13.91□□□□□ -0.18
CTTN-212ENST00000527962 GOLGA8QA0A0J9YX86 632 aa13.91□□□□□ -0.18
CTTN-212ENST00000527962 GOLGA8OA6NCC3 632 aa13.91□□□□□ -0.18
CTTN-212ENST00000527962 C9JVG2 144 aa13.91□□□□□ -0.18
CTTN-212ENST00000527962 GOLGA8NF8WBI6 632 aa13.91□□□□□ -0.18
CTTN-212ENST00000527962 SULT2B1O00204 365 aa13.91□□□□□ -0.18
CTTN-212ENST00000527962 ETV2O00321 342 aaPredicted RBP13.91□□□□□ -0.18
CTTN-212ENST00000527962 GPR171O14626 319 aa13.91□□□□□ -0.18
CTTN-212ENST00000527962 SMAD9O15198 467 aaKnown RBP13.91□□□□□ -0.18
CTTN-212ENST00000527962 CFLARO15519 480 aa13.91□□□□□ -0.18
CTTN-212ENST00000527962 PHF1O43189 567 aaPredicted RBP13.91□□□□□ -0.18
CTTN-212ENST00000527962 OIP5O43482 229 aa13.91□□□□□ -0.18
CTTN-212ENST00000527962 TRIM13O60858 407 aa13.91□□□□□ -0.18
CTTN-212ENST00000527962 FGF4P08620 206 aa13.91□□□□□ -0.18
CTTN-212ENST00000527962 CSF3P09919 207 aa13.91□□□□□ -0.18
CTTN-212ENST00000527962 PGCP20142 388 aa13.91□□□□□ -0.18
CTTN-212ENST00000527962 COX5AP20674 150 aa13.91□□□□□ -0.18
CTTN-212ENST00000527962 IGHV1-2P23083 117 aa13.91□□□□□ -0.18
CTTN-212ENST00000527962 FABP6P51161 128 aa13.91□□□□□ -0.18
CTTN-212ENST00000527962 CHRNB3Q05901 458 aa13.91□□□□□ -0.18
CTTN-212ENST00000527962 LOXL1Q08397 574 aaPredicted RBP13.91□□□□□ -0.18
CTTN-212ENST00000527962 PDK3Q15120 406 aa13.91□□□□□ -0.18
CTTN-212ENST00000527962 SEZ6L2Q6UXD5 910 aa13.91□□□□□ -0.18
CTTN-212ENST00000527962 TMPPEQ6ZT21 453 aa13.91□□□□□ -0.18
CTTN-212ENST00000527962 MUC15Q8N387 334 aa13.91□□□□□ -0.18
CTTN-212ENST00000527962 PSMA8Q8TAA3 256 aa13.91□□□□□ -0.18
CTTN-212ENST00000527962 SFXN5Q8TD22 340 aa13.91□□□□□ -0.18
CTTN-212ENST00000527962 ZNF775Q96BV0 537 aaPredicted RBP13.91□□□□□ -0.18
CTTN-212ENST00000527962 NMUR2Q9GZQ4 415 aa13.91□□□□□ -0.18
CTTN-212ENST00000527962 LAT2Q9GZY6 243 aa13.91□□□□□ -0.18
CTTN-212ENST00000527962 ASB6Q9NWX5 421 aa13.91□□□□□ -0.18
CTTN-212ENST00000527962 ING1Q9UK53 422 aaPredicted RBP13.91□□□□□ -0.18
CTTN-212ENST00000527962 NOSIPQ9Y314 301 aaKnown RBP13.91□□□□□ -0.18
CTTN-212ENST00000527962 NPIPA5A0A0B4J1W7 369 aa13.9□□□□□ -0.18
CTTN-212ENST00000527962 SERINC4A6NH21 518 aa13.9□□□□□ -0.18
CTTN-212ENST00000527962 ELOA3DA6NLF2 546 aaPredicted RBP13.9□□□□□ -0.18
CTTN-212ENST00000527962 NPIPA7E9PJI5 369 aa13.9□□□□□ -0.18
CTTN-212ENST00000527962 ANKRD28O15084 1053 aa13.9□□□□□ -0.18
CTTN-212ENST00000527962 GPRIN2O60269 458 aa13.9□□□□□ -0.18
CTTN-212ENST00000527962 RAD51DO75771 328 aa13.9□□□□□ -0.18
CTTN-212ENST00000527962 CYP7B1O75881 506 aa13.9□□□□□ -0.18
CTTN-212ENST00000527962 F12P00748 615 aaPredicted RBP13.9□□□□□ -0.18
CTTN-212ENST00000527962 NPIPA8P0DM63 369 aa13.9□□□□□ -0.18
CTTN-212ENST00000527962 LAMP1P11279 417 aa13.9□□□□□ -0.18
CTTN-212ENST00000527962 DIO1P49895 249 aa13.9□□□□□ -0.18
CTTN-212ENST00000527962 RNF144AP50876 292 aaPredicted RBP13.9□□□□□ -0.18
CTTN-212ENST00000527962 CASP9P55211 416 aa13.9□□□□□ -0.18
CTTN-212ENST00000527962 VLDLRP98155 873 aa13.9□□□□□ -0.18
CTTN-212ENST00000527962 CHRNEQ04844 493 aa13.9□□□□□ -0.18
CTTN-212ENST00000527962 MERTKQ12866 999 aa13.9□□□□□ -0.18
CTTN-212ENST00000527962 ELOA3BQ3SY89 546 aa13.9□□□□□ -0.18
CTTN-212ENST00000527962 ATP6AP1LQ52LC2 224 aa13.9□□□□□ -0.18
CTTN-212ENST00000527962 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.9□□□□□ -0.18
CTTN-212ENST00000527962 CYB5R2Q6BCY4 276 aa13.9□□□□□ -0.18
CTTN-212ENST00000527962 ZNF544Q6NX49 715 aa13.9□□□□□ -0.18
CTTN-212ENST00000527962 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.9□□□□□ -0.18
CTTN-212ENST00000527962 MTDHQ86UE4 582 aaKnown RBP13.9□□□□□ -0.18
CTTN-212ENST00000527962 C10orf107Q8IVU9 208 aa13.9□□□□□ -0.18
CTTN-212ENST00000527962 ZNF433Q8N7K0 673 aaPredicted RBP13.9□□□□□ -0.18
CTTN-212ENST00000527962 ELOA3Q8NG57 546 aa13.9□□□□□ -0.18
CTTN-212ENST00000527962 OR7A2PQ8NGA2 310 aa13.9□□□□□ -0.18
CTTN-212ENST00000527962 TWIST2Q8WVJ9 160 aa13.9□□□□□ -0.18
CTTN-212ENST00000527962 FAM168AQ92567 244 aa13.9□□□□□ -0.18
CTTN-212ENST00000527962 ZNF300Q96RE9 604 aaPredicted RBP13.9□□□□□ -0.18
CTTN-212ENST00000527962 THUMPD3Q9BV44 507 aaKnown RBP13.9□□□□□ -0.18
CTTN-212ENST00000527962 SHARPINQ9H0F6 387 aa13.9□□□□□ -0.18
CTTN-212ENST00000527962 TUBB1Q9H4B7 451 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms