RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 ALDH6A1Q02252 535 aaKnown RBP17.21■□□□□ 0.35
SMPD1-203ENST00000527275 FCRLBQ6BAA4 426 aa17.21■□□□□ 0.35
SMPD1-203ENST00000527275 PTCHD4Q6ZW05 846 aa17.21■□□□□ 0.35
SMPD1-203ENST00000527275 AHSA2Q719I0 299 aa17.21■□□□□ 0.35
SMPD1-203ENST00000527275 RRM2BQ7LG56 351 aa17.21■□□□□ 0.35
SMPD1-203ENST00000527275 PRICKLE2Q7Z3G6 844 aa17.21■□□□□ 0.35
SMPD1-203ENST00000527275 GDF7Q7Z4P5 450 aa17.21■□□□□ 0.35
SMPD1-203ENST00000527275 RANBP3LQ86VV4 465 aaPredicted RBP17.21■□□□□ 0.35
SMPD1-203ENST00000527275 NKAIN4Q8IVV8 208 aa17.21■□□□□ 0.35
SMPD1-203ENST00000527275 OR4C3Q8NH37 302 aa17.21■□□□□ 0.35
SMPD1-203ENST00000527275 ZNF420Q8TAQ5 688 aaPredicted RBP17.21■□□□□ 0.35
SMPD1-203ENST00000527275 MUL1Q969V5 352 aa17.21■□□□□ 0.35
SMPD1-203ENST00000527275 OMA1Q96E52 524 aa17.21■□□□□ 0.35
SMPD1-203ENST00000527275 ARMC7Q9H6L4 198 aa17.21■□□□□ 0.35
SMPD1-203ENST00000527275 NPFFR2Q9Y5X5 522 aa17.21■□□□□ 0.35
SMPD1-203ENST00000527275 MAN1A2O60476 641 aa17.21■□□□□ 0.34
SMPD1-203ENST00000527275 THY1P04216 161 aa17.21■□□□□ 0.34
SMPD1-203ENST00000527275 SERPINA7P05543 415 aa17.21■□□□□ 0.34
SMPD1-203ENST00000527275 GUSBP08236 651 aa17.21■□□□□ 0.34
SMPD1-203ENST00000527275 RNF144AP50876 292 aaPredicted RBP17.21■□□□□ 0.34
SMPD1-203ENST00000527275 SLX4IPQ5VYV7 408 aa17.21■□□□□ 0.34
SMPD1-203ENST00000527275 PRSS48Q7RTY5 328 aa17.21■□□□□ 0.34
SMPD1-203ENST00000527275 SLC34A3Q8N130 599 aa17.21■□□□□ 0.34
SMPD1-203ENST00000527275 ZNF248Q8NDW4 579 aa17.21■□□□□ 0.34
SMPD1-203ENST00000527275 GNPDA2Q8TDQ7 276 aa17.21■□□□□ 0.34
SMPD1-203ENST00000527275 SLC24A3Q9HC58 644 aa17.21■□□□□ 0.34
SMPD1-203ENST00000527275 ZBTB20Q9HC78 741 aaPredicted RBP17.21■□□□□ 0.34
SMPD1-203ENST00000527275 AMBNQ9NP70 447 aa17.21■□□□□ 0.34
SMPD1-203ENST00000527275 PSORS1C1Q9UIG5 152 aa17.21■□□□□ 0.34
SMPD1-203ENST00000527275 MRTO4Q9UKD2 239 aaKnown RBP17.21■□□□□ 0.34
SMPD1-203ENST00000527275 ENO4A6NNW6 628 aa17.2■□□□□ 0.34
SMPD1-203ENST00000527275 KLK10O43240 276 aa17.2■□□□□ 0.34
SMPD1-203ENST00000527275 MT-ND2P03891 347 aa17.2■□□□□ 0.34
SMPD1-203ENST00000527275 ADRB1P08588 477 aa17.2■□□□□ 0.34
SMPD1-203ENST00000527275 GKN3PP0CG01 181 aa17.2■□□□□ 0.34
SMPD1-203ENST00000527275 GSTM3P21266 225 aa17.2■□□□□ 0.34
SMPD1-203ENST00000527275 PSMD4P55036 377 aaKnown RBP17.2■□□□□ 0.34
SMPD1-203ENST00000527275 FAR1Q8WVX9 515 aa17.2■□□□□ 0.34
SMPD1-203ENST00000527275 ACOT11Q8WXI4 607 aaPredicted RBP17.2■□□□□ 0.34
SMPD1-203ENST00000527275 C12orf43Q96C57 262 aaKnown RBP17.2■□□□□ 0.34
SMPD1-203ENST00000527275 MPP4Q96JB8 637 aa17.2■□□□□ 0.34
SMPD1-203ENST00000527275 FLRT3Q9NZU0 649 aa17.2■□□□□ 0.34
SMPD1-203ENST00000527275 CLCA1A8K7I4 914 aa17.19■□□□□ 0.34
SMPD1-203ENST00000527275 ZNF99A8MXY4 864 aaPredicted RBP17.19■□□□□ 0.34
SMPD1-203ENST00000527275 AHCYL1O43865 530 aa17.19■□□□□ 0.34
SMPD1-203ENST00000527275 TSPAN2O60636 221 aa17.19■□□□□ 0.34
SMPD1-203ENST00000527275 ITGA10O75578 1167 aa17.19■□□□□ 0.34
SMPD1-203ENST00000527275 INMTO95050 263 aa17.19■□□□□ 0.34
SMPD1-203ENST00000527275 NADKO95544 446 aaPredicted RBP17.19■□□□□ 0.34
SMPD1-203ENST00000527275 NTN1O95631 604 aa17.19■□□□□ 0.34
SMPD1-203ENST00000527275 PRG2P13727 222 aa17.19■□□□□ 0.34
SMPD1-203ENST00000527275 PCSK6P29122 969 aa17.19■□□□□ 0.34
SMPD1-203ENST00000527275 IL12BP29460 328 aa17.19■□□□□ 0.34
SMPD1-203ENST00000527275 MAP2K4P45985 399 aa17.19■□□□□ 0.34
SMPD1-203ENST00000527275 ST13P50502 369 aaKnown RBP17.19■□□□□ 0.34
SMPD1-203ENST00000527275 LSAMPQ13449 338 aa17.19■□□□□ 0.34
SMPD1-203ENST00000527275 SVOPQ8N4V2 548 aa17.19■□□□□ 0.34
SMPD1-203ENST00000527275 GGHQ92820 318 aa17.19■□□□□ 0.34
SMPD1-203ENST00000527275 RASL10BQ96S79 203 aa17.19■□□□□ 0.34
SMPD1-203ENST00000527275 COPS4Q9BT78 406 aa17.19■□□□□ 0.34
SMPD1-203ENST00000527275 CACNA1AO00555 2505 aa17.19■□□□□ 0.34
SMPD1-203ENST00000527275 NPIPB9F8W1W9 429 aa17.19■□□□□ 0.34
SMPD1-203ENST00000527275 TRMUO75648 421 aaKnown RBP17.19■□□□□ 0.34
SMPD1-203ENST00000527275 NUDT6P53370 316 aa17.19■□□□□ 0.34
SMPD1-203ENST00000527275 PDZK1Q5T2W1 519 aa17.19■□□□□ 0.34
SMPD1-203ENST00000527275 C12orf73Q69YU5 71 aa17.19■□□□□ 0.34
SMPD1-203ENST00000527275 RPS19BP1Q86WX3 136 aaKnown RBP17.19■□□□□ 0.34
SMPD1-203ENST00000527275 MEX3DQ86XN8 651 aaKnown RBP17.19■□□□□ 0.34
SMPD1-203ENST00000527275 SIRT6Q8N6T7 355 aa17.19■□□□□ 0.34
SMPD1-203ENST00000527275 ZNF614Q8N883 585 aa17.19■□□□□ 0.34
SMPD1-203ENST00000527275 TOR1AIP2Q8NFQ8 470 aa17.19■□□□□ 0.34
SMPD1-203ENST00000527275 PIGXQ8TBF5 258 aa17.19■□□□□ 0.34
SMPD1-203ENST00000527275 BRIX1Q8TDN6 353 aaKnown RBP17.19■□□□□ 0.34
SMPD1-203ENST00000527275 PSMF1Q92530 271 aa17.19■□□□□ 0.34
SMPD1-203ENST00000527275 MYDGFQ969H8 173 aa17.19■□□□□ 0.34
SMPD1-203ENST00000527275 THOC3Q96J01 351 aaKnown RBP17.19■□□□□ 0.34
SMPD1-203ENST00000527275 FER1L6-AS2Q96M78 137 aa17.19■□□□□ 0.34
SMPD1-203ENST00000527275 DOK1Q99704 481 aa17.19■□□□□ 0.34
SMPD1-203ENST00000527275 POLR2J2Q9GZM3 115 aaKnown RBP17.19■□□□□ 0.34
SMPD1-203ENST00000527275 NAA50Q9GZZ1 169 aaKnown RBP17.19■□□□□ 0.34
SMPD1-203ENST00000527275 CDCP1Q9H5V8 836 aa17.19■□□□□ 0.34
SMPD1-203ENST00000527275 SLC7A7Q9UM01 511 aa17.19■□□□□ 0.34
SMPD1-203ENST00000527275 URB1O60287 2271 aaKnown RBP17.19■□□□□ 0.34
SMPD1-203ENST00000527275 EFSO43281 561 aa17.18■□□□□ 0.34
SMPD1-203ENST00000527275 ATP12AP54707 1039 aa17.18■□□□□ 0.34
SMPD1-203ENST00000527275 PSPHP78330 225 aa17.18■□□□□ 0.34
SMPD1-203ENST00000527275 CASP12Q6UXS9 341 aa17.18■□□□□ 0.34
SMPD1-203ENST00000527275 ERI1Q8IV48 349 aaKnown RBP17.18■□□□□ 0.34
SMPD1-203ENST00000527275 CLEC1AQ8NC01 280 aa17.18■□□□□ 0.34
SMPD1-203ENST00000527275 OR5M3Q8NGP4 307 aa17.18■□□□□ 0.34
SMPD1-203ENST00000527275 THAP4Q8WY91 577 aa17.18■□□□□ 0.34
SMPD1-203ENST00000527275 RORBQ92753 470 aa17.18■□□□□ 0.34
SMPD1-203ENST00000527275 SIGLEC11Q96RL6 698 aa17.18■□□□□ 0.34
SMPD1-203ENST00000527275 ATP13A2Q9NQ11 1180 aa17.18■□□□□ 0.34
SMPD1-203ENST00000527275 CLN6Q9NWW5 311 aa17.18■□□□□ 0.34
SMPD1-203ENST00000527275 SH3D21A4FU49 640 aa17.18■□□□□ 0.34
SMPD1-203ENST00000527275 TRAPPC13A5PLN9 417 aa17.18■□□□□ 0.34
SMPD1-203ENST00000527275 ICOSLGO75144 302 aa17.18■□□□□ 0.34
SMPD1-203ENST00000527275 BCAS1O75363 584 aaPredicted RBP17.18■□□□□ 0.34
SMPD1-203ENST00000527275 HTR2AP28223 471 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms