RNA–Protein interactions for RNA: ENST00000526669.6

CD44-224, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5 BASIC

Gene CD44, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-224ENST00000526669 GANABQ14697 944 aaKnown RBP12.43□□□□□ -0.42
CD44-224ENST00000526669 SLC10A1Q14973 349 aa12.43□□□□□ -0.42
CD44-224ENST00000526669 OR1Q1Q15612 314 aa12.43□□□□□ -0.42
CD44-224ENST00000526669 PLEKHM3Q6ZWE6 761 aa12.43□□□□□ -0.42
CD44-224ENST00000526669 RANBP3LQ86VV4 465 aaPredicted RBP12.43□□□□□ -0.42
CD44-224ENST00000526669 TSPYL5Q86VY4 417 aaPredicted RBP12.43□□□□□ -0.42
CD44-224ENST00000526669 SIAH3Q8IW03 269 aa12.43□□□□□ -0.42
CD44-224ENST00000526669 RNF217Q8TC41 542 aa12.43□□□□□ -0.42
CD44-224ENST00000526669 POC1BQ8TC44 478 aa12.43□□□□□ -0.42
CD44-224ENST00000526669 RSRC1Q96IZ7 334 aaKnown RBP12.43□□□□□ -0.42
CD44-224ENST00000526669 ZNF559Q9BR84 538 aa12.43□□□□□ -0.42
CD44-224ENST00000526669 LDAHQ9H6V9 325 aa12.43□□□□□ -0.42
CD44-224ENST00000526669 ZDHHC11Q9H8X9 412 aa12.43□□□□□ -0.42
CD44-224ENST00000526669 HHATLQ9HCP6 504 aa12.43□□□□□ -0.42
CD44-224ENST00000526669 TNFRSF10DQ9UBN6 386 aa12.43□□□□□ -0.42
CD44-224ENST00000526669 RPS6KB2Q9UBS0 482 aa12.43□□□□□ -0.42
CD44-224ENST00000526669 TESQ9UGI8 421 aaKnown RBP12.43□□□□□ -0.42
CD44-224ENST00000526669 KALRNO60229 2985 aa12.42□□□□□ -0.42
CD44-224ENST00000526669 CHD6Q8TD26 2715 aa12.42□□□□□ -0.42
CD44-224ENST00000526669 INTS1Q8N201 2190 aaKnown RBP12.42□□□□□ -0.42
CD44-224ENST00000526669 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.42□□□□□ -0.42
CD44-224ENST00000526669 OR2M5A3KFT3 312 aa12.42□□□□□ -0.42
CD44-224ENST00000526669 AQP12BA6NM10 295 aa12.42□□□□□ -0.42
CD44-224ENST00000526669 RRP9O43818 475 aaKnown RBP12.42□□□□□ -0.42
CD44-224ENST00000526669 OPN1LWP04000 364 aa12.42□□□□□ -0.42
CD44-224ENST00000526669 SEMG1P04279 462 aa12.42□□□□□ -0.42
CD44-224ENST00000526669 IFNW1P05000 195 aa12.42□□□□□ -0.42
CD44-224ENST00000526669 HPNP05981 417 aa12.42□□□□□ -0.42
CD44-224ENST00000526669 UQCRBP14927 111 aa12.42□□□□□ -0.42
CD44-224ENST00000526669 PRKCAP17252 672 aa12.42□□□□□ -0.42
CD44-224ENST00000526669 CCNA2P20248 432 aa12.42□□□□□ -0.42
CD44-224ENST00000526669 COPZ1P61923 177 aa12.42□□□□□ -0.42
CD44-224ENST00000526669 VLDLRP98155 873 aa12.42□□□□□ -0.42
CD44-224ENST00000526669 MERTKQ12866 999 aa12.42□□□□□ -0.42
CD44-224ENST00000526669 KPNB1Q14974 876 aaKnown RBP12.42□□□□□ -0.42
CD44-224ENST00000526669 ENTPD8Q5MY95 495 aa12.42□□□□□ -0.42
CD44-224ENST00000526669 TRILQ7L0X0 811 aa12.42□□□□□ -0.42
CD44-224ENST00000526669 AQP12AQ8IXF9 295 aa12.42□□□□□ -0.42
CD44-224ENST00000526669 ADGRG5Q8IZF4 528 aa12.42□□□□□ -0.42
CD44-224ENST00000526669 ATP6V1C2Q8NEY4 427 aa12.42□□□□□ -0.42
CD44-224ENST00000526669 SMPDL3BQ92485 455 aa12.42□□□□□ -0.42
CD44-224ENST00000526669 NR4A3Q92570 626 aa12.42□□□□□ -0.42
CD44-224ENST00000526669 DNAJA3Q96EY1 480 aa12.42□□□□□ -0.42
CD44-224ENST00000526669 SFXN2Q96NB2 322 aa12.42□□□□□ -0.42
CD44-224ENST00000526669 TMEM185BQ9H7F4 350 aa12.42□□□□□ -0.42
CD44-224ENST00000526669 ACER3Q9NUN7 267 aa12.42□□□□□ -0.42
CD44-224ENST00000526669 QPCTLQ9NXS2 382 aa12.42□□□□□ -0.42
CD44-224ENST00000526669 RHCGQ9UBD6 479 aa12.42□□□□□ -0.42
CD44-224ENST00000526669 ANAPC2Q9UJX6 822 aa12.42□□□□□ -0.42
CD44-224ENST00000526669 AURKCQ9UQB9 309 aa12.42□□□□□ -0.42
CD44-224ENST00000526669 DIDO1Q9BTC0 2240 aaKnown RBP12.42□□□□□ -0.42
CD44-224ENST00000526669 A0A087WZY1 265 aa12.41□□□□□ -0.42
CD44-224ENST00000526669 TRGV5A0A0B4J1U4 118 aa12.41□□□□□ -0.42
CD44-224ENST00000526669 A0A1B0GWA3 101 aa12.41□□□□□ -0.42
CD44-224ENST00000526669 TCRBV3S1A0A5B6 114 aa12.41□□□□□ -0.42
CD44-224ENST00000526669 DHRS12A0PJE2 317 aa12.41□□□□□ -0.42
CD44-224ENST00000526669 H3BML4 177 aa12.41□□□□□ -0.42
CD44-224ENST00000526669 NTN1O95631 604 aa12.41□□□□□ -0.42
CD44-224ENST00000526669 PEPDP12955 493 aa12.41□□□□□ -0.42
CD44-224ENST00000526669 IL11P20809 199 aa12.41□□□□□ -0.42
CD44-224ENST00000526669 STARP49675 285 aa12.41□□□□□ -0.42
CD44-224ENST00000526669 B3GALT5-AS1P59052 145 aa12.41□□□□□ -0.42
CD44-224ENST00000526669 TAS2R41P59536 307 aa12.41□□□□□ -0.42
CD44-224ENST00000526669 KCNC4Q03721 635 aa12.41□□□□□ -0.42
CD44-224ENST00000526669 DCST1Q5T197 706 aa12.41□□□□□ -0.42
CD44-224ENST00000526669 WBP2NLQ6ICG8 309 aa12.41□□□□□ -0.42
CD44-224ENST00000526669 TSEN54Q7Z6J9 526 aaKnown RBP12.41□□□□□ -0.42
CD44-224ENST00000526669 ZDHHC21Q8IVQ6 265 aa12.41□□□□□ -0.42
CD44-224ENST00000526669 CPT1CQ8TCG5 803 aa12.41□□□□□ -0.42
CD44-224ENST00000526669 CANT1Q8WVQ1 401 aa12.41□□□□□ -0.42
CD44-224ENST00000526669 FAR1Q8WVX9 515 aa12.41□□□□□ -0.42
CD44-224ENST00000526669 TMEM234Q8WY98 164 aa12.41□□□□□ -0.42
CD44-224ENST00000526669 ST8SIA1Q92185 356 aa12.41□□□□□ -0.42
CD44-224ENST00000526669 SLC35B4Q969S0 331 aa12.41□□□□□ -0.42
CD44-224ENST00000526669 C3orf49Q96BT1 292 aa12.41□□□□□ -0.42
CD44-224ENST00000526669 DTNBP1Q96EV8 351 aa12.41□□□□□ -0.42
CD44-224ENST00000526669 C7orf34Q96L11 122 aa12.41□□□□□ -0.42
CD44-224ENST00000526669 TRIM2Q9C040 744 aa12.41□□□□□ -0.42
CD44-224ENST00000526669 EVA1AQ9H8M9 152 aa12.41□□□□□ -0.42
CD44-224ENST00000526669 TMEM27Q9HBJ8 222 aa12.41□□□□□ -0.42
CD44-224ENST00000526669 SPRR3Q9UBC9 169 aa12.41□□□□□ -0.42
CD44-224ENST00000526669 SMG1Q96Q15 3661 aaKnown RBP12.4□□□□□ -0.42
CD44-224ENST00000526669 TMED7-TICAM2A0A0A6YYA0 188 aa12.4□□□□□ -0.42
CD44-224ENST00000526669 FAAHO00519 579 aa12.4□□□□□ -0.42
CD44-224ENST00000526669 SEMA7AO75326 666 aa12.4□□□□□ -0.42
CD44-224ENST00000526669 FABP3P05413 133 aa12.4□□□□□ -0.42
CD44-224ENST00000526669 FUT4P22083 530 aa12.4□□□□□ -0.42
CD44-224ENST00000526669 TACR3P29371 465 aa12.4□□□□□ -0.42
CD44-224ENST00000526669 TDGF1P3P51864 188 aa12.4□□□□□ -0.42
CD44-224ENST00000526669 CHRNB3Q05901 458 aa12.4□□□□□ -0.42
CD44-224ENST00000526669 PIN1Q13526 163 aaPredicted RBP12.4□□□□□ -0.42
CD44-224ENST00000526669 C3AR1Q16581 482 aa12.4□□□□□ -0.42
CD44-224ENST00000526669 FAM98BQ52LJ0 330 aaKnown RBP12.4□□□□□ -0.42
CD44-224ENST00000526669 SOWAHCQ53LP3 525 aaPredicted RBP12.4□□□□□ -0.42
CD44-224ENST00000526669 ZNF324BQ6AW86 544 aaPredicted RBP12.4□□□□□ -0.42
CD44-224ENST00000526669 GRINAQ7Z429 371 aa12.4□□□□□ -0.42
CD44-224ENST00000526669 GTPBP8Q8N3Z3 284 aaPredicted RBP12.4□□□□□ -0.42
CD44-224ENST00000526669 LSM14AQ8ND56 463 aaKnown RBP12.4□□□□□ -0.42
CD44-224ENST00000526669 NEIL3Q8TAT5 605 aa12.4□□□□□ -0.42
CD44-224ENST00000526669 ADAMTS16Q8TE57 1224 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms