RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 HOXD1Q9GZZ0 328 aa13.66□□□□□ -0.22
MRPS28-209ENST00000522987 SLCO5A1Q9H2Y9 848 aa13.66□□□□□ -0.22
MRPS28-209ENST00000522987 NGBQ9NPG2 151 aa13.66□□□□□ -0.22
MRPS28-209ENST00000522987 YAE1D1Q9NRH1 226 aa13.66□□□□□ -0.22
MRPS28-209ENST00000522987 NPAP1Q9NZP6 1156 aa13.66□□□□□ -0.22
MRPS28-209ENST00000522987 KLHL9Q9P2J3 617 aa13.66□□□□□ -0.22
MRPS28-209ENST00000522987 KCNE5Q9UJ90 142 aa13.66□□□□□ -0.22
MRPS28-209ENST00000522987 MKLN1Q9UL63 735 aa13.66□□□□□ -0.22
MRPS28-209ENST00000522987 FBN1P35555 2871 aaKnown RBP13.65□□□□□ -0.22
MRPS28-209ENST00000522987 SERINC4A6NH21 518 aa13.65□□□□□ -0.22
MRPS28-209ENST00000522987 ESPNB1AK53 854 aa13.65□□□□□ -0.22
MRPS28-209ENST00000522987 FCMRO60667 390 aa13.65□□□□□ -0.22
MRPS28-209ENST00000522987 BCAS1O75363 584 aaPredicted RBP13.65□□□□□ -0.22
MRPS28-209ENST00000522987 FESP07332 822 aa13.65□□□□□ -0.22
MRPS28-209ENST00000522987 UBTFL6P0CB48 400 aaPredicted RBP13.65□□□□□ -0.22
MRPS28-209ENST00000522987 TFPIP10646 304 aa13.65□□□□□ -0.22
MRPS28-209ENST00000522987 G6PDP11413 515 aa13.65□□□□□ -0.22
MRPS28-209ENST00000522987 CREB1P16220 341 aa13.65□□□□□ -0.22
MRPS28-209ENST00000522987 DDX5P17844 614 aaKnown RBP13.65□□□□□ -0.22
MRPS28-209ENST00000522987 MATN1P21941 496 aa13.65□□□□□ -0.22
MRPS28-209ENST00000522987 IGHV1-2P23083 117 aa13.65□□□□□ -0.22
MRPS28-209ENST00000522987 IDUAP35475 653 aa13.65□□□□□ -0.22
MRPS28-209ENST00000522987 RPL3P39023 403 aaKnown RBP13.65□□□□□ -0.22
MRPS28-209ENST00000522987 OR3A2P47893 321 aa13.65□□□□□ -0.22
MRPS28-209ENST00000522987 CDH11P55287 796 aa13.65□□□□□ -0.22
MRPS28-209ENST00000522987 SUMO3P55854 103 aaPredicted RBP13.65□□□□□ -0.22
MRPS28-209ENST00000522987 SPOCK1Q08629 439 aa13.65□□□□□ -0.22
MRPS28-209ENST00000522987 MERTKQ12866 999 aa13.65□□□□□ -0.22
MRPS28-209ENST00000522987 PPA1Q15181 289 aa13.65□□□□□ -0.22
MRPS28-209ENST00000522987 OR4F3Q6IEY1 312 aa13.65□□□□□ -0.22
MRPS28-209ENST00000522987 CXXC5Q7LFL8 322 aaKnown RBP13.65□□□□□ -0.22
MRPS28-209ENST00000522987 ZNF100Q8IYN0 542 aa13.65□□□□□ -0.22
MRPS28-209ENST00000522987 SFXN5Q8TD22 340 aa13.65□□□□□ -0.22
MRPS28-209ENST00000522987 TCP10LQ8TDR4 215 aa13.65□□□□□ -0.22
MRPS28-209ENST00000522987 SLC35G5Q96KT7 338 aa13.65□□□□□ -0.22
MRPS28-209ENST00000522987 EML4Q9HC35 981 aaKnown RBP13.65□□□□□ -0.22
MRPS28-209ENST00000522987 ATAD3AQ9NVI7 634 aa13.65□□□□□ -0.22
MRPS28-209ENST00000522987 ACTL7BQ9Y614 415 aa13.65□□□□□ -0.22
MRPS28-209ENST00000522987 RNF103-CHMP3A0A140T963 221 aa13.64□□□□□ -0.23
MRPS28-209ENST00000522987 ABCD4O14678 606 aa13.64□□□□□ -0.23
MRPS28-209ENST00000522987 SSX4O60224 188 aa13.64□□□□□ -0.23
MRPS28-209ENST00000522987 LYPLA1O75608 230 aaPredicted RBP13.64□□□□□ -0.23
MRPS28-209ENST00000522987 RAD51DO75771 328 aa13.64□□□□□ -0.23
MRPS28-209ENST00000522987 CD8AP01732 235 aa13.64□□□□□ -0.23
MRPS28-209ENST00000522987 TP53P04637 393 aaPredicted RBP13.64□□□□□ -0.23
MRPS28-209ENST00000522987 KRT16P08779 473 aa13.64□□□□□ -0.23
MRPS28-209ENST00000522987 CCNA2P20248 432 aa13.64□□□□□ -0.23
MRPS28-209ENST00000522987 RYKP34925 604 aa13.64□□□□□ -0.23
MRPS28-209ENST00000522987 SESN3P58005 492 aa13.64□□□□□ -0.23
MRPS28-209ENST00000522987 RAC3P60763 192 aa13.64□□□□□ -0.23
MRPS28-209ENST00000522987 SKP2Q13309 424 aa13.64□□□□□ -0.23
MRPS28-209ENST00000522987 CBFBQ13951 182 aa13.64□□□□□ -0.23
MRPS28-209ENST00000522987 P2RY6Q15077 328 aa13.64□□□□□ -0.23
MRPS28-209ENST00000522987 Q6ZT83 130 aa13.64□□□□□ -0.23
MRPS28-209ENST00000522987 C6orf120Q7Z4R8 191 aa13.64□□□□□ -0.23
MRPS28-209ENST00000522987 ANKRD46Q86W74 232 aa13.64□□□□□ -0.23
MRPS28-209ENST00000522987 UBE2J2Q8N2K1 259 aa13.64□□□□□ -0.23
MRPS28-209ENST00000522987 PIAS4Q8N2W9 510 aaPredicted RBP13.64□□□□□ -0.23
MRPS28-209ENST00000522987 SLC43A2Q8N370 569 aa13.64□□□□□ -0.23
MRPS28-209ENST00000522987 OR52N5Q8NH56 324 aa13.64□□□□□ -0.23
MRPS28-209ENST00000522987 PSMA8Q8TAA3 256 aa13.64□□□□□ -0.23
MRPS28-209ENST00000522987 ZNF75CPQ92670 426 aaPredicted RBP13.64□□□□□ -0.23
MRPS28-209ENST00000522987 RAB8BQ92930 207 aa13.64□□□□□ -0.23
MRPS28-209ENST00000522987 ZBTB9Q96C00 473 aa13.64□□□□□ -0.23
MRPS28-209ENST00000522987 COQ8BQ96D53 544 aa13.64□□□□□ -0.23
MRPS28-209ENST00000522987 HS6ST2Q96MM7 605 aa13.64□□□□□ -0.23
MRPS28-209ENST00000522987 C1QTNF6Q9BXI9 259 aa13.64□□□□□ -0.23
MRPS28-209ENST00000522987 TRIM2Q9C040 744 aa13.64□□□□□ -0.23
MRPS28-209ENST00000522987 ALG2Q9H553 416 aa13.64□□□□□ -0.23
MRPS28-209ENST00000522987 CISD1Q9NZ45 108 aaKnown RBP13.64□□□□□ -0.23
MRPS28-209ENST00000522987 COL6A5A8TX70 2615 aa13.64□□□□□ -0.23
MRPS28-209ENST00000522987 ANK3Q12955 4377 aaKnown RBP13.64□□□□□ -0.23
MRPS28-209ENST00000522987 WDR91A4D1P6 747 aa13.63□□□□□ -0.23
MRPS28-209ENST00000522987 SHISA9B4DS77 424 aa13.63□□□□□ -0.23
MRPS28-209ENST00000522987 SULT2B1O00204 365 aa13.63□□□□□ -0.23
MRPS28-209ENST00000522987 EIF4E2O60573 245 aaKnown RBP13.63□□□□□ -0.23
MRPS28-209ENST00000522987 CYTIPO60759 359 aa13.63□□□□□ -0.23
MRPS28-209ENST00000522987 CPSF4O95639 269 aaKnown RBP13.63□□□□□ -0.23
MRPS28-209ENST00000522987 CSTAP01040 98 aa13.63□□□□□ -0.23
MRPS28-209ENST00000522987 DIO1P49895 249 aa13.63□□□□□ -0.23
MRPS28-209ENST00000522987 ZNF83P51522 516 aa13.63□□□□□ -0.23
MRPS28-209ENST00000522987 FOXG1P55316 489 aaPredicted RBP13.63□□□□□ -0.23
MRPS28-209ENST00000522987 CHRNEQ04844 493 aa13.63□□□□□ -0.23
MRPS28-209ENST00000522987 PDCD2Q16342 344 aaPredicted RBP13.63□□□□□ -0.23
MRPS28-209ENST00000522987 MAPK14Q16539 360 aa13.63□□□□□ -0.23
MRPS28-209ENST00000522987 C9orf135Q5VTT2 229 aa13.63□□□□□ -0.23
MRPS28-209ENST00000522987 C3orf33Q6P1S2 294 aa13.63□□□□□ -0.23
MRPS28-209ENST00000522987 TNFAIP8L2Q6P589 184 aaPredicted RBP13.63□□□□□ -0.23
MRPS28-209ENST00000522987 C16orf62Q7Z3J2 963 aa13.63□□□□□ -0.23
MRPS28-209ENST00000522987 RIMKLAQ8IXN7 391 aa13.63□□□□□ -0.23
MRPS28-209ENST00000522987 OR4A15Q8NGL6 344 aa13.63□□□□□ -0.23
MRPS28-209ENST00000522987 PKNOX2Q96KN3 472 aa13.63□□□□□ -0.23
MRPS28-209ENST00000522987 PRPF18Q99633 342 aaKnown RBP13.63□□□□□ -0.23
MRPS28-209ENST00000522987 TRAF4Q9BUZ4 470 aaPredicted RBP13.63□□□□□ -0.23
MRPS28-209ENST00000522987 OR51I1Q9H343 314 aa13.63□□□□□ -0.23
MRPS28-209ENST00000522987 PPCSQ9HAB8 311 aa13.63□□□□□ -0.23
MRPS28-209ENST00000522987 BCO1Q9HAY6 547 aa13.63□□□□□ -0.23
MRPS28-209ENST00000522987 ATRQ13535 2644 aa13.62□□□□□ -0.23
MRPS28-209ENST00000522987 ITM2AO43736 263 aa13.62□□□□□ -0.23
MRPS28-209ENST00000522987 GPRIN2O60269 458 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms