RNA–Protein interactions for RNA: ENST00000522854.5

CSGALNACT1-211, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT1, Length 1,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-211ENST00000522854 GAS1P54826 345 aa13.74□□□□□ -0.21
CSGALNACT1-211ENST00000522854 TPD52P55327 224 aaPredicted RBP13.74□□□□□ -0.21
CSGALNACT1-211ENST00000522854 MLF1P58340 268 aa13.74□□□□□ -0.21
CSGALNACT1-211ENST00000522854 COPZ1P61923 177 aa13.74□□□□□ -0.21
CSGALNACT1-211ENST00000522854 CD47Q08722 323 aa13.74□□□□□ -0.21
CSGALNACT1-211ENST00000522854 EFR3AQ14156 821 aa13.74□□□□□ -0.21
CSGALNACT1-211ENST00000522854 NTRK2Q16620 822 aa13.74□□□□□ -0.21
CSGALNACT1-211ENST00000522854 ZNF691Q5VV52 312 aa13.74□□□□□ -0.21
CSGALNACT1-211ENST00000522854 TTC23Q5W5X9 447 aa13.74□□□□□ -0.21
CSGALNACT1-211ENST00000522854 LAIR2Q6ISS4 152 aa13.74□□□□□ -0.21
CSGALNACT1-211ENST00000522854 MDGA2Q7Z553 956 aa13.74□□□□□ -0.21
CSGALNACT1-211ENST00000522854 ZNF786Q8N393 782 aa13.74□□□□□ -0.21
CSGALNACT1-211ENST00000522854 ASB15Q8WXK1 588 aa13.74□□□□□ -0.21
CSGALNACT1-211ENST00000522854 LAT2Q9GZY6 243 aa13.74□□□□□ -0.21
CSGALNACT1-211ENST00000522854 NDRG4Q9ULP0 352 aaKnown RBP13.74□□□□□ -0.21
CSGALNACT1-211ENST00000522854 TRABD2BA6NFA1 517 aa13.73□□□□□ -0.21
CSGALNACT1-211ENST00000522854 SHISA8B8ZZ34 492 aa13.73□□□□□ -0.21
CSGALNACT1-211ENST00000522854 CCL3P10147 92 aa13.73□□□□□ -0.21
CSGALNACT1-211ENST00000522854 IFI30P13284 250 aa13.73□□□□□ -0.21
CSGALNACT1-211ENST00000522854 SSR4P51571 173 aa13.73□□□□□ -0.21
CSGALNACT1-211ENST00000522854 ISL1P61371 349 aa13.73□□□□□ -0.21
CSGALNACT1-211ENST00000522854 IL5RAQ01344 420 aa13.73□□□□□ -0.21
CSGALNACT1-211ENST00000522854 FOXC1Q12948 553 aa13.73□□□□□ -0.21
CSGALNACT1-211ENST00000522854 DCAF10Q5QP82 559 aa13.73□□□□□ -0.21
CSGALNACT1-211ENST00000522854 ULK3Q6PHR2 472 aa13.73□□□□□ -0.21
CSGALNACT1-211ENST00000522854 C8orf59Q8N0T1 100 aaPredicted RBP13.73□□□□□ -0.21
CSGALNACT1-211ENST00000522854 PIGXQ8TBF5 258 aa13.73□□□□□ -0.21
CSGALNACT1-211ENST00000522854 NR1H4Q96RI1 486 aaPredicted RBP13.73□□□□□ -0.21
CSGALNACT1-211ENST00000522854 DGCR6LQ9BY27 220 aa13.73□□□□□ -0.21
CSGALNACT1-211ENST00000522854 ANKRD19PQ9H560 264 aa13.73□□□□□ -0.21
CSGALNACT1-211ENST00000522854 METTL7AQ9H8H3 244 aa13.73□□□□□ -0.21
CSGALNACT1-211ENST00000522854 EXOSC3Q9NQT5 275 aaKnown RBP13.73□□□□□ -0.21
CSGALNACT1-211ENST00000522854 YARS2Q9Y2Z4 477 aaKnown RBP13.73□□□□□ -0.21
CSGALNACT1-211ENST00000522854 NKX2-8O15522 239 aa13.72□□□□□ -0.21
CSGALNACT1-211ENST00000522854 CDH2P19022 906 aaPredicted RBP13.72□□□□□ -0.21
CSGALNACT1-211ENST00000522854 LCN1P31025 176 aa13.72□□□□□ -0.21
CSGALNACT1-211ENST00000522854 CASP3P42574 277 aa13.72□□□□□ -0.21
CSGALNACT1-211ENST00000522854 TMED10P49755 219 aaKnown RBP13.72□□□□□ -0.21
CSGALNACT1-211ENST00000522854 CRISP1P54107 249 aa13.72□□□□□ -0.21
CSGALNACT1-211ENST00000522854 SMN1Q16637 294 aaKnown RBP13.72□□□□□ -0.21
CSGALNACT1-211ENST00000522854 CLEC12AQ5QGZ9 265 aa13.72□□□□□ -0.21
CSGALNACT1-211ENST00000522854 ARSKQ6UWY0 536 aa13.72□□□□□ -0.21
CSGALNACT1-211ENST00000522854 NUP54Q7Z3B4 507 aa13.72□□□□□ -0.21
CSGALNACT1-211ENST00000522854 TMEM156Q8N614 296 aa13.72□□□□□ -0.21
CSGALNACT1-211ENST00000522854 OR8D4Q8NGM9 314 aa13.72□□□□□ -0.21
CSGALNACT1-211ENST00000522854 SLC39A7Q92504 469 aa13.72□□□□□ -0.21
CSGALNACT1-211ENST00000522854 NR4A3Q92570 626 aa13.72□□□□□ -0.21
CSGALNACT1-211ENST00000522854 SGCDQ92629 289 aa13.72□□□□□ -0.21
CSGALNACT1-211ENST00000522854 B3GNT4Q9C0J1 378 aa13.72□□□□□ -0.21
CSGALNACT1-211ENST00000522854 E9PQ18 207 aa13.72□□□□□ -0.21
CSGALNACT1-211ENST00000522854 SERPINA7P05543 415 aa13.72□□□□□ -0.21
CSGALNACT1-211ENST00000522854 LIPCP11150 499 aa13.72□□□□□ -0.21
CSGALNACT1-211ENST00000522854 OSMP13725 252 aa13.72□□□□□ -0.21
CSGALNACT1-211ENST00000522854 NAGAP17050 411 aa13.72□□□□□ -0.21
CSGALNACT1-211ENST00000522854 TACR3P29371 465 aa13.72□□□□□ -0.21
CSGALNACT1-211ENST00000522854 CDH15P55291 814 aa13.72□□□□□ -0.21
CSGALNACT1-211ENST00000522854 FOXK1P85037 733 aa13.72□□□□□ -0.21
CSGALNACT1-211ENST00000522854 CRYZQ08257 329 aaKnown RBP13.72□□□□□ -0.21
CSGALNACT1-211ENST00000522854 DBPQ10586 325 aaPredicted RBP13.72□□□□□ -0.21
CSGALNACT1-211ENST00000522854 WBP2NLQ6ICG8 309 aa13.72□□□□□ -0.21
CSGALNACT1-211ENST00000522854 TTC33Q6PID6 262 aaPredicted RBP13.72□□□□□ -0.21
CSGALNACT1-211ENST00000522854 LINC00114Q6XXX2 140 aa13.72□□□□□ -0.21
CSGALNACT1-211ENST00000522854 RAB43Q86YS6 212 aa13.72□□□□□ -0.21
CSGALNACT1-211ENST00000522854 BEST3Q8N1M1 668 aa13.72□□□□□ -0.21
CSGALNACT1-211ENST00000522854 PARP8Q8N3A8 854 aa13.72□□□□□ -0.21
CSGALNACT1-211ENST00000522854 LRRC17Q8N6Y2 441 aa13.72□□□□□ -0.21
CSGALNACT1-211ENST00000522854 B4GALNT2Q8NHY0 566 aa13.72□□□□□ -0.21
CSGALNACT1-211ENST00000522854 FAM81AQ8TBF8 368 aa13.72□□□□□ -0.21
CSGALNACT1-211ENST00000522854 SLC35B4Q969S0 331 aa13.72□□□□□ -0.21
CSGALNACT1-211ENST00000522854 HRASLS5Q96KN8 279 aa13.72□□□□□ -0.21
CSGALNACT1-211ENST00000522854 ZNF426Q9BUY5 554 aa13.72□□□□□ -0.21
CSGALNACT1-211ENST00000522854 ING2Q9H160 280 aa13.72□□□□□ -0.21
CSGALNACT1-211ENST00000522854 PNPLA3Q9NST1 481 aa13.72□□□□□ -0.21
CSGALNACT1-211ENST00000522854 SELENONQ9NZV5 590 aa13.72□□□□□ -0.21
CSGALNACT1-211ENST00000522854 FBXL2Q9UKC9 423 aa13.72□□□□□ -0.21
CSGALNACT1-211ENST00000522854 VDAC3Q9Y277 283 aa13.72□□□□□ -0.21
CSGALNACT1-211ENST00000522854 IGKV1D-42A0A075B6H8 117 aa13.71□□□□□ -0.21
CSGALNACT1-211ENST00000522854 TRAV27A0A087WT01 109 aa13.71□□□□□ -0.21
CSGALNACT1-211ENST00000522854 KLF4O43474 513 aa13.71□□□□□ -0.21
CSGALNACT1-211ENST00000522854 FREM3P0C091 2139 aa13.71□□□□□ -0.21
CSGALNACT1-211ENST00000522854 ICAM2P13598 275 aa13.71□□□□□ -0.21
CSGALNACT1-211ENST00000522854 ITGA3P26006 1051 aa13.71□□□□□ -0.21
CSGALNACT1-211ENST00000522854 CD82P27701 267 aa13.71□□□□□ -0.21
CSGALNACT1-211ENST00000522854 P2RX1P51575 399 aa13.71□□□□□ -0.21
CSGALNACT1-211ENST00000522854 QPRTQ15274 297 aa13.71□□□□□ -0.21
CSGALNACT1-211ENST00000522854 ZSWIM7Q19AV6 140 aa13.71□□□□□ -0.21
CSGALNACT1-211ENST00000522854 GXYLT1Q4G148 440 aa13.71□□□□□ -0.21
CSGALNACT1-211ENST00000522854 ACER2Q5QJU3 275 aa13.71□□□□□ -0.21
CSGALNACT1-211ENST00000522854 THAP5Q7Z6K1 395 aa13.71□□□□□ -0.21
CSGALNACT1-211ENST00000522854 ATG4DQ86TL0 474 aaPredicted RBP13.71□□□□□ -0.21
CSGALNACT1-211ENST00000522854 ZNF440Q8IYI8 595 aa13.71□□□□□ -0.21
CSGALNACT1-211ENST00000522854 ENTHD1Q8IYW4 607 aa13.71□□□□□ -0.21
CSGALNACT1-211ENST00000522854 OR13C2Q8NGS9 318 aa13.71□□□□□ -0.21
CSGALNACT1-211ENST00000522854 OR5W2Q8NH69 310 aa13.71□□□□□ -0.21
CSGALNACT1-211ENST00000522854 GNPDA2Q8TDQ7 276 aa13.71□□□□□ -0.21
CSGALNACT1-211ENST00000522854 GPR119Q8TDV5 335 aa13.71□□□□□ -0.21
CSGALNACT1-211ENST00000522854 RNF138Q8WVD3 245 aa13.71□□□□□ -0.21
CSGALNACT1-211ENST00000522854 TTC9Q92623 222 aa13.71□□□□□ -0.21
CSGALNACT1-211ENST00000522854 KIAA1143Q96AT1 154 aaPredicted RBP13.71□□□□□ -0.21
CSGALNACT1-211ENST00000522854 BPIFA2Q96DR5 249 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms