RNA–Protein interactions for RNA: ENST00000522792.1

CTNNA1-236, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-236ENST00000522792 SLC1A7O00341 560 aa14.1□□□□□ -0.15
CTNNA1-236ENST00000522792 XPNPEP2O43895 674 aa14.1□□□□□ -0.15
CTNNA1-236ENST00000522792 EIF4E2O60573 245 aaKnown RBP14.1□□□□□ -0.15
CTNNA1-236ENST00000522792 FBXO45P0C2W1 286 aa14.1□□□□□ -0.15
CTNNA1-236ENST00000522792 CRHBPP24387 322 aa14.1□□□□□ -0.15
CTNNA1-236ENST00000522792 EEF1B2P24534 225 aaKnown RBP14.1□□□□□ -0.15
CTNNA1-236ENST00000522792 CDC42P60953 191 aa14.1□□□□□ -0.15
CTNNA1-236ENST00000522792 PRKCDQ05655 676 aa14.1□□□□□ -0.15
CTNNA1-236ENST00000522792 Q0VFX4 171 aa14.1□□□□□ -0.15
CTNNA1-236ENST00000522792 TOMM34Q15785 309 aaPredicted RBP14.1□□□□□ -0.15
CTNNA1-236ENST00000522792 RBM48Q5RL73 367 aaKnown RBP14.1□□□□□ -0.15
CTNNA1-236ENST00000522792 NUP54Q7Z3B4 507 aa14.1□□□□□ -0.15
CTNNA1-236ENST00000522792 OR8D4Q8NGM9 314 aa14.1□□□□□ -0.15
CTNNA1-236ENST00000522792 DNAJA4Q8WW22 397 aaPredicted RBP14.1□□□□□ -0.15
CTNNA1-236ENST00000522792 BPIFA2Q96DR5 249 aa14.1□□□□□ -0.15
CTNNA1-236ENST00000522792 HS6ST2Q96MM7 605 aa14.1□□□□□ -0.15
CTNNA1-236ENST00000522792 GPR87Q9BY21 358 aa14.1□□□□□ -0.15
CTNNA1-236ENST00000522792 BATF3Q9NR55 127 aa14.1□□□□□ -0.15
CTNNA1-236ENST00000522792 WBP4O75554 376 aaKnown RBP14.1□□□□□ -0.15
CTNNA1-236ENST00000522792 CLPTM1O96005 669 aa14.1□□□□□ -0.15
CTNNA1-236ENST00000522792 HPP00738 406 aa14.1□□□□□ -0.15
CTNNA1-236ENST00000522792 CEACAM1P13688 526 aa14.1□□□□□ -0.15
CTNNA1-236ENST00000522792 RBMS1P29558 406 aaKnown RBP14.1□□□□□ -0.15
CTNNA1-236ENST00000522792 RBM34P42696 430 aaKnown RBP14.1□□□□□ -0.15
CTNNA1-236ENST00000522792 SLC6A8P48029 635 aa14.1□□□□□ -0.15
CTNNA1-236ENST00000522792 CRYZQ08257 329 aaKnown RBP14.1□□□□□ -0.15
CTNNA1-236ENST00000522792 GINS1Q14691 196 aa14.1□□□□□ -0.15
CTNNA1-236ENST00000522792 CLEC12AQ5QGZ9 265 aa14.1□□□□□ -0.15
CTNNA1-236ENST00000522792 SLX4IPQ5VYV7 408 aa14.1□□□□□ -0.15
CTNNA1-236ENST00000522792 LINC00114Q6XXX2 140 aa14.1□□□□□ -0.15
CTNNA1-236ENST00000522792 RASSF6Q6ZTQ3 369 aa14.1□□□□□ -0.15
CTNNA1-236ENST00000522792 MRGPREQ86SM8 312 aa14.1□□□□□ -0.15
CTNNA1-236ENST00000522792 CCDC103Q8IW40 242 aa14.1□□□□□ -0.15
CTNNA1-236ENST00000522792 DEPDC4Q8N2C3 294 aa14.1□□□□□ -0.15
CTNNA1-236ENST00000522792 IL22RA1Q8N6P7 574 aa14.1□□□□□ -0.15
CTNNA1-236ENST00000522792 TEX47Q8TBZ9 253 aa14.1□□□□□ -0.15
CTNNA1-236ENST00000522792 SPACA9Q96E40 222 aaPredicted RBP14.1□□□□□ -0.15
CTNNA1-236ENST00000522792 ZNF426Q9BUY5 554 aa14.1□□□□□ -0.15
CTNNA1-236ENST00000522792 YTHDF1Q9BYJ9 559 aaKnown RBP14.1□□□□□ -0.15
CTNNA1-236ENST00000522792 KLRF1Q9NZS2 232 aa14.1□□□□□ -0.15
CTNNA1-236ENST00000522792 IL20RAQ9UHF4 553 aa14.1□□□□□ -0.15
CTNNA1-236ENST00000522792 IL17BQ9UHF5 180 aa14.1□□□□□ -0.15
CTNNA1-236ENST00000522792 ZNF292O60281 2723 aa14.1□□□□□ -0.15
CTNNA1-236ENST00000522792 A0A087WUJ7 227 aa14.09□□□□□ -0.15
CTNNA1-236ENST00000522792 UNC119BA6NIH7 251 aa14.09□□□□□ -0.15
CTNNA1-236ENST00000522792 SAGP10523 405 aaPredicted RBP14.09□□□□□ -0.15
CTNNA1-236ENST00000522792 PIGFQ07326 219 aa14.09□□□□□ -0.15
CTNNA1-236ENST00000522792 IL20RBQ6UXL0 311 aa14.09□□□□□ -0.15
CTNNA1-236ENST00000522792 CDK20Q8IZL9 346 aa14.09□□□□□ -0.15
CTNNA1-236ENST00000522792 OR13C2Q8NGS9 318 aa14.09□□□□□ -0.15
CTNNA1-236ENST00000522792 OR5W2Q8NH69 310 aa14.09□□□□□ -0.15
CTNNA1-236ENST00000522792 B4GALNT2Q8NHY0 566 aa14.09□□□□□ -0.15
CTNNA1-236ENST00000522792 TTC9Q92623 222 aa14.09□□□□□ -0.15
CTNNA1-236ENST00000522792 NKD1Q969G9 470 aa14.09□□□□□ -0.15
CTNNA1-236ENST00000522792 TBC1D23Q9NUY8 699 aa14.09□□□□□ -0.15
CTNNA1-236ENST00000522792 TRIM64A6NGJ6 449 aa14.08□□□□□ -0.15
CTNNA1-236ENST00000522792 ELOA3DA6NLF2 546 aaPredicted RBP14.08□□□□□ -0.15
CTNNA1-236ENST00000522792 ENO4A6NNW6 628 aa14.08□□□□□ -0.15
CTNNA1-236ENST00000522792 PTGES3LE9PB15 166 aa14.08□□□□□ -0.15
CTNNA1-236ENST00000522792 CDC40O60508 579 aaKnown RBP eCLIP14.08□□□□□ -0.15
CTNNA1-236ENST00000522792 CCNA2P20248 432 aa14.08□□□□□ -0.15
CTNNA1-236ENST00000522792 ENDOUP21128 410 aaKnown RBP14.08□□□□□ -0.15
CTNNA1-236ENST00000522792 TACR3P29371 465 aa14.08□□□□□ -0.15
CTNNA1-236ENST00000522792 HLCSP50747 726 aa14.08□□□□□ -0.15
CTNNA1-236ENST00000522792 P2RX1P51575 399 aa14.08□□□□□ -0.15
CTNNA1-236ENST00000522792 CTBP2P56545 445 aa14.08□□□□□ -0.15
CTNNA1-236ENST00000522792 ATP1A4Q13733 1029 aa14.08□□□□□ -0.15
CTNNA1-236ENST00000522792 CBFBQ13951 182 aa14.08□□□□□ -0.15
CTNNA1-236ENST00000522792 TGIF1Q15583 401 aa14.08□□□□□ -0.15
CTNNA1-236ENST00000522792 NTRK2Q16620 822 aa14.08□□□□□ -0.15
CTNNA1-236ENST00000522792 COL28A1Q2UY09 1125 aa14.08□□□□□ -0.15
CTNNA1-236ENST00000522792 ELOA3BQ3SY89 546 aa14.08□□□□□ -0.15
CTNNA1-236ENST00000522792 C12orf73Q69YU5 71 aa14.08□□□□□ -0.15
CTNNA1-236ENST00000522792 ACSM5Q6NUN0 579 aa14.08□□□□□ -0.15
CTNNA1-236ENST00000522792 POMZP3Q6PJE2 187 aa14.08□□□□□ -0.15
CTNNA1-236ENST00000522792 ZNF620Q6ZNG0 422 aa14.08□□□□□ -0.15
CTNNA1-236ENST00000522792 PTCHD4Q6ZW05 846 aa14.08□□□□□ -0.15
CTNNA1-236ENST00000522792 ATG4DQ86TL0 474 aaPredicted RBP14.08□□□□□ -0.15
CTNNA1-236ENST00000522792 RPS19BP1Q86WX3 136 aaKnown RBP14.08□□□□□ -0.15
CTNNA1-236ENST00000522792 CACTIN-AS1Q8N1I8 211 aa14.08□□□□□ -0.15
CTNNA1-236ENST00000522792 SLC15A4Q8N697 577 aa14.08□□□□□ -0.15
CTNNA1-236ENST00000522792 ELOA3Q8NG57 546 aa14.08□□□□□ -0.15
CTNNA1-236ENST00000522792 RHOXF1Q8NHV9 184 aa14.08□□□□□ -0.15
CTNNA1-236ENST00000522792 IL4I1Q96RQ9 567 aa14.08□□□□□ -0.15
CTNNA1-236ENST00000522792 RHNO1Q9BSD3 238 aa14.08□□□□□ -0.15
CTNNA1-236ENST00000522792 METTL7AQ9H8H3 244 aa14.08□□□□□ -0.15
CTNNA1-236ENST00000522792 HRH3Q9Y5N1 445 aa14.08□□□□□ -0.15
CTNNA1-236ENST00000522792 EFCAB9A8MZ26 197 aa14.08□□□□□ -0.16
CTNNA1-236ENST00000522792 B4DXG7 233 aa14.08□□□□□ -0.16
CTNNA1-236ENST00000522792 FAM20BO75063 409 aa14.08□□□□□ -0.16
CTNNA1-236ENST00000522792 WISP1O95388 367 aa14.08□□□□□ -0.16
CTNNA1-236ENST00000522792 TFAP2AP05549 437 aa14.08□□□□□ -0.16
CTNNA1-236ENST00000522792 PGCP20142 388 aa14.08□□□□□ -0.16
CTNNA1-236ENST00000522792 GIPRP48546 466 aa14.08□□□□□ -0.16
CTNNA1-236ENST00000522792 TOP3AQ13472 1001 aaPredicted RBP14.08□□□□□ -0.16
CTNNA1-236ENST00000522792 ZNF791Q3KP31 576 aaPredicted RBP14.08□□□□□ -0.16
CTNNA1-236ENST00000522792 BROXQ5VW32 411 aa14.08□□□□□ -0.16
CTNNA1-236ENST00000522792 CASP12Q6UXS9 341 aa14.08□□□□□ -0.16
CTNNA1-236ENST00000522792 TMPRSS11FQ6ZWK6 438 aa14.08□□□□□ -0.16
CTNNA1-236ENST00000522792 SIRT6Q8N6T7 355 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms