RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 OR52P1PQ8NH57 321 aa16■□□□□ 0.15
CLK4-211ENST00000522556 NFKBIDQ8NI38 313 aa16■□□□□ 0.15
CLK4-211ENST00000522556 C10orf82Q8WW14 230 aa16■□□□□ 0.15
CLK4-211ENST00000522556 ROBO4Q8WZ75 1007 aa16■□□□□ 0.15
CLK4-211ENST00000522556 SLC39A3Q9BRY0 314 aa16■□□□□ 0.15
CLK4-211ENST00000522556 SFXN3Q9BWM7 321 aa16■□□□□ 0.15
CLK4-211ENST00000522556 MTHFD2LQ9H903 347 aaPredicted RBP16■□□□□ 0.15
CLK4-211ENST00000522556 A4GALTQ9NPC4 353 aa16■□□□□ 0.15
CLK4-211ENST00000522556 SAR1AQ9NR31 198 aa16■□□□□ 0.15
CLK4-211ENST00000522556 TMEM45AQ9NWC5 275 aa16■□□□□ 0.15
CLK4-211ENST00000522556 LEF1Q9UJU2 399 aaPredicted RBP16■□□□□ 0.15
CLK4-211ENST00000522556 ZNF443Q9Y2A4 671 aaPredicted RBP16■□□□□ 0.15
CLK4-211ENST00000522556 ZNF175Q9Y473 711 aa16■□□□□ 0.15
CLK4-211ENST00000522556 IGHV3-15A0A0B4J1V0 119 aa15.99■□□□□ 0.15
CLK4-211ENST00000522556 ATP8B1O43520 1251 aa15.99■□□□□ 0.15
CLK4-211ENST00000522556 FRS3O43559 492 aa15.99■□□□□ 0.15
CLK4-211ENST00000522556 IL18BPO95998 194 aa15.99■□□□□ 0.15
CLK4-211ENST00000522556 PRG2P13727 222 aa15.99■□□□□ 0.15
CLK4-211ENST00000522556 IL7RP16871 459 aa15.99■□□□□ 0.15
CLK4-211ENST00000522556 ME2P23368 584 aa15.99■□□□□ 0.15
CLK4-211ENST00000522556 ADH6P28332 368 aa15.99■□□□□ 0.15
CLK4-211ENST00000522556 OPRM1P35372 400 aa15.99■□□□□ 0.15
CLK4-211ENST00000522556 MAGEA8P43361 318 aa15.99■□□□□ 0.15
CLK4-211ENST00000522556 GYS2P54840 703 aa15.99■□□□□ 0.15
CLK4-211ENST00000522556 EEFSECP57772 596 aaKnown RBP15.99■□□□□ 0.15
CLK4-211ENST00000522556 MTPNP58546 118 aa15.99■□□□□ 0.15
CLK4-211ENST00000522556 EEF1A1P68104 462 aaKnown RBP15.99■□□□□ 0.15
CLK4-211ENST00000522556 MERTKQ12866 999 aa15.99■□□□□ 0.15
CLK4-211ENST00000522556 KLF10Q13118 480 aa15.99■□□□□ 0.15
CLK4-211ENST00000522556 FADDQ13158 208 aa15.99■□□□□ 0.15
CLK4-211ENST00000522556 FBXL19-AS1Q494R0 122 aa15.99■□□□□ 0.15
CLK4-211ENST00000522556 GCNT6Q5T4J0 391 aa15.99■□□□□ 0.15
CLK4-211ENST00000522556 OSTF1Q92882 214 aa15.99■□□□□ 0.15
CLK4-211ENST00000522556 STARD4Q96DR4 205 aa15.99■□□□□ 0.15
CLK4-211ENST00000522556 ZFP3Q96NJ6 502 aa15.99■□□□□ 0.15
CLK4-211ENST00000522556 CCDC106Q9BWC9 280 aa15.99■□□□□ 0.15
CLK4-211ENST00000522556 OPN3Q9H1Y3 402 aaPredicted RBP15.99■□□□□ 0.15
CLK4-211ENST00000522556 RABEP2Q9H5N1 569 aa15.99■□□□□ 0.15
CLK4-211ENST00000522556 EXOSC3Q9NQT5 275 aaKnown RBP15.99■□□□□ 0.15
CLK4-211ENST00000522556 CTPS2Q9NRF8 586 aa15.99■□□□□ 0.15
CLK4-211ENST00000522556 ACER3Q9NUN7 267 aa15.99■□□□□ 0.15
CLK4-211ENST00000522556 NDUFAF1Q9Y375 327 aa15.99■□□□□ 0.15
CLK4-211ENST00000522556 MAST4O15021 2626 aa15.98■□□□□ 0.15
CLK4-211ENST00000522556 CDHR4A6H8M9 788 aa15.98■□□□□ 0.15
CLK4-211ENST00000522556 ANGPT2O15123 496 aa15.98■□□□□ 0.15
CLK4-211ENST00000522556 DBIP07108 87 aaKnown RBP15.98■□□□□ 0.15
CLK4-211ENST00000522556 PGCP20142 388 aa15.98■□□□□ 0.15
CLK4-211ENST00000522556 CCNA2P20248 432 aa15.98■□□□□ 0.15
CLK4-211ENST00000522556 IDH2P48735 452 aaKnown RBP15.98■□□□□ 0.15
CLK4-211ENST00000522556 IRX1P78414 480 aaPredicted RBP15.98■□□□□ 0.15
CLK4-211ENST00000522556 SELENBP1Q13228 472 aa15.98■□□□□ 0.15
CLK4-211ENST00000522556 ADRM1Q16186 407 aa15.98■□□□□ 0.15
CLK4-211ENST00000522556 ZNF239Q16600 458 aaKnown RBP15.98■□□□□ 0.15
CLK4-211ENST00000522556 RUNDC3AQ59EK9 446 aa15.98■□□□□ 0.15
CLK4-211ENST00000522556 METTL21CQ5VZV1 264 aa15.98■□□□□ 0.15
CLK4-211ENST00000522556 PEX5LQ8IYB4 626 aa15.98■□□□□ 0.15
CLK4-211ENST00000522556 DPP10Q8N608 796 aa15.98■□□□□ 0.15
CLK4-211ENST00000522556 ZNF563Q8TA94 476 aa15.98■□□□□ 0.15
CLK4-211ENST00000522556 ABHD3Q8WU67 409 aa15.98■□□□□ 0.15
CLK4-211ENST00000522556 OIT3Q8WWZ8 545 aa15.98■□□□□ 0.15
CLK4-211ENST00000522556 ST8SIA1Q92185 356 aa15.98■□□□□ 0.15
CLK4-211ENST00000522556 RNASE6Q93091 150 aaKnown RBP15.98■□□□□ 0.15
CLK4-211ENST00000522556 CGREF1Q99674 301 aa15.98■□□□□ 0.15
CLK4-211ENST00000522556 OR11A1Q9GZK7 315 aa15.98■□□□□ 0.15
CLK4-211ENST00000522556 GALNT8Q9NY28 637 aa15.98■□□□□ 0.15
CLK4-211ENST00000522556 GMEB1Q9Y692 573 aa15.98■□□□□ 0.15
CLK4-211ENST00000522556 ABCA12Q86UK0 2595 aa15.97■□□□□ 0.15
CLK4-211ENST00000522556 FXYD1O00168 92 aa15.97■□□□□ 0.15
CLK4-211ENST00000522556 SYT5O00445 386 aa15.97■□□□□ 0.15
CLK4-211ENST00000522556 SMNDC1O75940 238 aaKnown RBP eCLIP15.97■□□□□ 0.153e-6■■■□□ 15.3
CLK4-211ENST00000522556 PGM3O95394 542 aa15.97■□□□□ 0.15
CLK4-211ENST00000522556 GPX2P18283 190 aa15.97■□□□□ 0.15
CLK4-211ENST00000522556 SEC24CP53992 1094 aa15.97■□□□□ 0.15
CLK4-211ENST00000522556 HOXC5Q00444 222 aa15.97■□□□□ 0.15
CLK4-211ENST00000522556 EPS8Q12929 822 aa15.97■□□□□ 0.15
CLK4-211ENST00000522556 NFYCQ13952 458 aa15.97■□□□□ 0.15
CLK4-211ENST00000522556 GDF7Q7Z4P5 450 aa15.97■□□□□ 0.15
CLK4-211ENST00000522556 PTOV1Q86YD1 416 aa15.97■□□□□ 0.15
CLK4-211ENST00000522556 CMIPQ8IY22 773 aa15.97■□□□□ 0.15
CLK4-211ENST00000522556 ANKRD27Q96NW4 1050 aa15.97■□□□□ 0.15
CLK4-211ENST00000522556 OR5B2Q96R09 309 aa15.97■□□□□ 0.15
CLK4-211ENST00000522556 RBM24Q9BX46 236 aaKnown RBP15.97■□□□□ 0.15
CLK4-211ENST00000522556 RAD21L1Q9H4I0 556 aa15.97■□□□□ 0.15
CLK4-211ENST00000522556 CALML5Q9NZT1 146 aa15.97■□□□□ 0.15
CLK4-211ENST00000522556 ARMCX1Q9P291 453 aa15.97■□□□□ 0.15
CLK4-211ENST00000522556 KLHL14Q9P2G3 628 aa15.97■□□□□ 0.15
CLK4-211ENST00000522556 PACSIN3Q9UKS6 424 aa15.97■□□□□ 0.15
CLK4-211ENST00000522556 MPDZO75970 2070 aa15.96■□□□□ 0.15
CLK4-211ENST00000522556 APCP25054 2843 aa15.96■□□□□ 0.15
CLK4-211ENST00000522556 CGAP01215 116 aa15.96■□□□□ 0.15
CLK4-211ENST00000522556 ENPP1P22413 925 aa15.96■□□□□ 0.15
CLK4-211ENST00000522556 AQP1P29972 269 aa15.96■□□□□ 0.15
CLK4-211ENST00000522556 CCKARP32238 428 aa15.96■□□□□ 0.15
CLK4-211ENST00000522556 CPOXP36551 454 aa15.96■□□□□ 0.15
CLK4-211ENST00000522556 ACAA2P42765 397 aaKnown RBP15.96■□□□□ 0.15
CLK4-211ENST00000522556 CARD18P57730 90 aa15.96■□□□□ 0.15
CLK4-211ENST00000522556 GLIPR1L2Q4G1C9 344 aa15.96■□□□□ 0.15
CLK4-211ENST00000522556 LIN52Q52LA3 116 aa15.96■□□□□ 0.15
CLK4-211ENST00000522556 C3orf33Q6P1S2 294 aa15.96■□□□□ 0.15
CLK4-211ENST00000522556 ZNF474Q6S9Z5 364 aaPredicted RBP15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms