RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 STEAP2Q8NFT2 490 aa2.54□□□□□ -2
SKP1-204ENST00000517691 OR2L5Q8NG80 312 aa2.54□□□□□ -2
SKP1-204ENST00000517691 OR5T3Q8NGG3 340 aa2.54□□□□□ -2
SKP1-204ENST00000517691 OR2Y1Q8NGV0 311 aa2.54□□□□□ -2
SKP1-204ENST00000517691 OR14K1Q8NGZ2 314 aa2.54□□□□□ -2
SKP1-204ENST00000517691 OR51Q1Q8NH59 317 aa2.54□□□□□ -2
SKP1-204ENST00000517691 ZNF473Q8WTR7 871 aaKnown RBP2.54□□□□□ -2
SKP1-204ENST00000517691 APOBEC4Q8WW27 367 aaKnown RBP2.54□□□□□ -2
SKP1-204ENST00000517691 EXTL1Q92935 676 aa2.54□□□□□ -2
SKP1-204ENST00000517691 FKBP10Q96AY3 582 aa2.54□□□□□ -2
SKP1-204ENST00000517691 MBD6Q96DN6 1003 aa2.54□□□□□ -2
SKP1-204ENST00000517691 MS4A6EQ96DS6 147 aa2.54□□□□□ -2
SKP1-204ENST00000517691 L3HYPDHQ96EM0 354 aa2.54□□□□□ -2
SKP1-204ENST00000517691 C19orf60Q96EN9 201 aa2.54□□□□□ -2
SKP1-204ENST00000517691 WDR34Q96EX3 536 aa2.54□□□□□ -2
SKP1-204ENST00000517691 FRG2BQ96QU4 278 aa2.54□□□□□ -2
SKP1-204ENST00000517691 KCNA7Q96RP8 456 aa2.54□□□□□ -2
SKP1-204ENST00000517691 HBEGFQ99075 208 aa2.54□□□□□ -2
SKP1-204ENST00000517691 INPP5KQ9BT40 448 aa2.54□□□□□ -2
SKP1-204ENST00000517691 MRI1Q9BV20 369 aa2.54□□□□□ -2
SKP1-204ENST00000517691 NTMT1Q9BV86 223 aa2.54□□□□□ -2
SKP1-204ENST00000517691 ZNF416Q9BWM5 594 aa2.54□□□□□ -2
SKP1-204ENST00000517691 ROGDIQ9GZN7 287 aa2.54□□□□□ -2
SKP1-204ENST00000517691 SLC6A15Q9H2J7 730 aa2.54□□□□□ -2
SKP1-204ENST00000517691 CXorf36Q9H7Y0 433 aa2.54□□□□□ -2
SKP1-204ENST00000517691 WDR54Q9H977 334 aa2.54□□□□□ -2
SKP1-204ENST00000517691 TMEM165Q9HC07 324 aa2.54□□□□□ -2
SKP1-204ENST00000517691 TMBIM4Q9HC24 238 aa2.54□□□□□ -2
SKP1-204ENST00000517691 EML4Q9HC35 981 aaKnown RBP2.54□□□□□ -2
SKP1-204ENST00000517691 MLXIPLQ9NP71 852 aa2.54□□□□□ -2
SKP1-204ENST00000517691 MKKSQ9NPJ1 570 aaPredicted RBP2.54□□□□□ -2
SKP1-204ENST00000517691 FARSBQ9NSD9 589 aaKnown RBP2.54□□□□□ -2
SKP1-204ENST00000517691 PNPLA3Q9NST1 481 aa2.54□□□□□ -2
SKP1-204ENST00000517691 C14orf105Q9NVL8 296 aa2.54□□□□□ -2
SKP1-204ENST00000517691 NKIRAS1Q9NYS0 192 aa2.54□□□□□ -2
SKP1-204ENST00000517691 AHSPQ9NZD4 102 aa2.54□□□□□ -2
SKP1-204ENST00000517691 C3orf18Q9UK00 162 aa2.54□□□□□ -2
SKP1-204ENST00000517691 ADAM29Q9UKF5 820 aa2.54□□□□□ -2
SKP1-204ENST00000517691 NXT1Q9UKK6 140 aaKnown RBP2.54□□□□□ -2
SKP1-204ENST00000517691 FIS1Q9Y3D6 152 aa2.54□□□□□ -2
SKP1-204ENST00000517691 TIMM22Q9Y584 194 aa2.54□□□□□ -2
SKP1-204ENST00000517691 AP4B1Q9Y6B7 739 aa2.54□□□□□ -2
SKP1-204ENST00000517691 UNC13CQ8NB66 2214 aa2.54□□□□□ -2
SKP1-204ENST00000517691 ITPR1Q14643 2758 aa2.54□□□□□ -2
SKP1-204ENST00000517691 ANKRD11Q6UB99 2663 aaPredicted RBP2.54□□□□□ -2
SKP1-204ENST00000517691 KNTC1P50748 2209 aa2.54□□□□□ -2
SKP1-204ENST00000517691 ZFHX4Q86UP3 3567 aa2.54□□□□□ -2
SKP1-204ENST00000517691 TRAV6A0A075B6T7 132 aa2.54□□□□□ -2
SKP1-204ENST00000517691 C15orf38-AP3S2A0A0A6YYH1 394 aa2.54□□□□□ -2
SKP1-204ENST00000517691 A0A1W2PN81 502 aa2.54□□□□□ -2
SKP1-204ENST00000517691 TMEM120BA0PK00 339 aa2.54□□□□□ -2
SKP1-204ENST00000517691 ANKRD61A6NGH8 418 aa2.54□□□□□ -2
SKP1-204ENST00000517691 EIF4E1BA6NMX2 242 aaKnown RBP2.54□□□□□ -2
SKP1-204ENST00000517691 A8MUA0 341 aa2.54□□□□□ -2
SKP1-204ENST00000517691 IDSB3KWA1 339 aa2.54□□□□□ -2
SKP1-204ENST00000517691 C4orf51C9J302 202 aa2.54□□□□□ -2
SKP1-204ENST00000517691 CLDN4O14493 209 aa2.54□□□□□ -2
SKP1-204ENST00000517691 UBFD1O14562 309 aaKnown RBP2.54□□□□□ -2
SKP1-204ENST00000517691 TM9SF1O15321 606 aa2.54□□□□□ -2
SKP1-204ENST00000517691 TYROBPO43914 113 aa2.54□□□□□ -2
SKP1-204ENST00000517691 CNOT3O75175 753 aaKnown RBP2.54□□□□□ -2
SKP1-204ENST00000517691 ALOX12BO75342 701 aa2.54□□□□□ -2
SKP1-204ENST00000517691 KLF7O75840 302 aaPredicted RBP2.54□□□□□ -2
SKP1-204ENST00000517691 MFN2O95140 757 aa2.54□□□□□ -2
SKP1-204ENST00000517691 BMP10O95393 424 aa2.54□□□□□ -2
SKP1-204ENST00000517691 ESRRBO95718 433 aa2.54□□□□□ -2
SKP1-204ENST00000517691 CH25HO95992 272 aa2.54□□□□□ -2
SKP1-204ENST00000517691 IFNA16P05015 189 aa2.54□□□□□ -2
SKP1-204ENST00000517691 KRT8P05787 483 aa2.54□□□□□ -2
SKP1-204ENST00000517691 KLK1P06870 262 aa2.54□□□□□ -2
SKP1-204ENST00000517691 BPGMP07738 259 aa2.54□□□□□ -2
SKP1-204ENST00000517691 UMODP07911 640 aa2.54□□□□□ -2
SKP1-204ENST00000517691 FHP07954 510 aa2.54□□□□□ -2
SKP1-204ENST00000517691 LINC00032P0C843 101 aa2.54□□□□□ -2
SKP1-204ENST00000517691 RNH1P13489 461 aaKnown RBP2.54□□□□□ -2
SKP1-204ENST00000517691 H2AFXP16104 143 aaPredicted RBP2.54□□□□□ -2
SKP1-204ENST00000517691 NR1D1P20393 614 aa2.54□□□□□ -2
SKP1-204ENST00000517691 MAOAP21397 527 aa2.54□□□□□ -2
SKP1-204ENST00000517691 HIST1H1TP22492 207 aaPredicted RBP2.54□□□□□ -2
SKP1-204ENST00000517691 CALB2P22676 271 aa2.54□□□□□ -2
SKP1-204ENST00000517691 CPN2P22792 545 aa2.54□□□□□ -2
SKP1-204ENST00000517691 MMP11P24347 488 aa2.54□□□□□ -2
SKP1-204ENST00000517691 ITGA3P26006 1051 aa2.54□□□□□ -2
SKP1-204ENST00000517691 CERS1P27544 350 aa2.54□□□□□ -2
SKP1-204ENST00000517691 CHRNA7P36544 502 aa2.54□□□□□ -2
SKP1-204ENST00000517691 PCP4P48539 62 aa2.54□□□□□ -2
SKP1-204ENST00000517691 CLK3P49761 638 aaKnown RBP2.54□□□□□ -2
SKP1-204ENST00000517691 NAA20P61599 178 aa2.54□□□□□ -2
SKP1-204ENST00000517691 BTG2P78543 158 aa2.54□□□□□ -2
SKP1-204ENST00000517691 HMGCS1Q01581 520 aa2.54□□□□□ -2
SKP1-204ENST00000517691 STX4Q12846 297 aa2.54□□□□□ -2
SKP1-204ENST00000517691 PDZK1IP1Q13113 114 aa2.54□□□□□ -2
SKP1-204ENST00000517691 TRAF3Q13114 568 aa2.54□□□□□ -2
SKP1-204ENST00000517691 STX3Q13277 289 aa2.54□□□□□ -2
SKP1-204ENST00000517691 MRPL49Q13405 166 aaKnown RBP2.54□□□□□ -2
SKP1-204ENST00000517691 CUL3Q13618 768 aa2.54□□□□□ -2
SKP1-204ENST00000517691 IL13RA2Q14627 380 aa2.54□□□□□ -2
SKP1-204ENST00000517691 ABRAXAS2Q15018 415 aa2.54□□□□□ -2
SKP1-204ENST00000517691 CHI3L2Q15782 390 aa2.54□□□□□ -2
SKP1-204ENST00000517691 IMPG1Q17R60 797 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms