RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 TUBA8Q9NY65 449 aaPredicted RBP2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 PLEK2Q9NYT0 353 aa2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 CD274Q9NZQ7 290 aa2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 SLC17A6Q9P2U8 582 aa2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 OPTCQ9UBM4 332 aa2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 TRPC4Q9UBN4 977 aa2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 MARCOQ9UEW3 520 aaPredicted RBP2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 TAC3Q9UHF0 121 aa2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 OPN4Q9UHM6 478 aa2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 NUP50Q9UKX7 468 aa2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 PLAGL1Q9UM63 463 aa2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 SLC22A14Q9Y267 594 aa2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 HIF3AQ9Y2N7 669 aa2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 DYRK1BQ9Y463 629 aa2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 PCDHGA11Q9Y5H2 935 aa2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 SOX21Q9Y651 276 aaPredicted RBP2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 AP4B1Q9Y6B7 739 aa2.74□□□□□ -1.97
SCARNA13-201ENST00000516672 MDFIC2A0A1B0GVS7 189 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 A0A1W2PNV4 684 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 FEZF1A0PJY2 475 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 LRIT2A6NDA9 550 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 NPEPPSL1A6NEC2 478 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 ANKDD1BA6NHY2 528 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 NPIPB8E9PQR5 432 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 G3V2L1 256 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 H0YJX3 145 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 H3BNH8 94 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 H3BSA7 217 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 ZNF701M0R085 212 aaPredicted RBP2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 DLGAP1O14490 977 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 ACOT8O14734 319 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 HAT1O14929 419 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 PCDH7O60245 1069 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 PLIN3O60664 434 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 B4GALT2O60909 372 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 PFDN1O60925 122 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 SUPT3HO75486 399 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 WDR47O94967 919 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 SEMA3DO95025 777 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 SCELO95171 688 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 TNFAIP8O95379 198 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 NSA2O95478 260 aaKnown RBP2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 ESRRBO95718 433 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 CLPTM1O96005 669 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 SERPINE1P05121 402 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 FGF4P08620 206 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 RPS17P08708 135 aaKnown RBP2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 SBK3P0C264 359 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 C8orf89P0DMQ9 161 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 SMIM10L1P0DMW3 83 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 CDH1P12830 882 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 COX4I1P13073 169 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 HSD3B1P14060 373 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 GFAPP14136 432 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 PORP16435 677 aaPredicted RBP2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 ALOX12P18054 663 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 EPORP19235 508 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 GRK2P25098 689 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 HSD3B2P26439 372 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 GIFP27352 417 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 GMPRP36959 345 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 GDF5P43026 501 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 GSTM5P46439 218 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 STT3AP46977 705 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 AVPR1BP47901 424 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 ENTPD1P49961 510 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 TAS2R50P59544 299 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 REEP5Q00765 189 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 IRF8Q02556 426 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 RGS1Q08116 209 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 TGM3Q08188 693 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 CRYZQ08257 329 aaKnown RBP2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 LCP2Q13094 533 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 KLF10Q13118 480 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 STX3Q13277 289 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 GAB1Q13480 694 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 CEACAM7Q14002 265 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 DOC2AQ14183 400 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 ZNF460Q14592 562 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 PFKFB4Q16877 469 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 LRRC36Q1X8D7 754 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 GRAMD1BQ3KR37 738 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 MMEL1Q495T6 779 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 XKR6Q5GH73 641 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 CFAP157Q5JU67 520 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 ZNF678Q5SXM1 525 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 DEPDC1Q5TB30 811 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 C6orf163Q5TEZ5 329 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 ATG16L1Q676U5 607 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 ABLIM2Q6H8Q1 611 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 GRHL2Q6ISB3 625 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 MED27Q6P2C8 311 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 SUSD1Q6UWL2 747 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 ZYG11AQ6WRX3 759 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 GK5Q6ZS86 529 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 ZCCHC23Q6ZST2 131 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 Q6ZSV7 163 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 VN1R4Q7Z5H5 301 aa2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 ATG4DQ86TL0 474 aaPredicted RBP2.73□□□□□ -1.97
SCARNA13-201ENST00000516672 ASPGQ86U10 573 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms