RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 ACSL4O60488 711 aa-2.14□□□□□ -2.75
RNU6-539P-201ENST00000516665 PRAF2O60831 178 aa-2.14□□□□□ -2.75
RNU6-539P-201ENST00000516665 ATP5BP06576 529 aaKnown RBP-2.14□□□□□ -2.75
RNU6-539P-201ENST00000516665 SLC35G6P0C7Q6 338 aa-2.14□□□□□ -2.75
RNU6-539P-201ENST00000516665 PFKFB1P16118 471 aa-2.14□□□□□ -2.75
RNU6-539P-201ENST00000516665 CCNA2P20248 432 aa-2.14□□□□□ -2.75
RNU6-539P-201ENST00000516665 TBXA2RP21731 343 aa-2.14□□□□□ -2.75
RNU6-539P-201ENST00000516665 OR1D2P34982 312 aa-2.14□□□□□ -2.75
RNU6-539P-201ENST00000516665 COPB2P35606 906 aa-2.14□□□□□ -2.75
RNU6-539P-201ENST00000516665 HSD17B3P37058 310 aa-2.14□□□□□ -2.75
RNU6-539P-201ENST00000516665 NBL1P41271 181 aa-2.14□□□□□ -2.75
RNU6-539P-201ENST00000516665 TUBP50607 506 aa-2.14□□□□□ -2.75
RNU6-539P-201ENST00000516665 NEK3P51956 506 aa-2.14□□□□□ -2.75
RNU6-539P-201ENST00000516665 UBE2E1P51965 193 aa-2.14□□□□□ -2.75
RNU6-539P-201ENST00000516665 TGFBR3Q03167 851 aa-2.14□□□□□ -2.75
RNU6-539P-201ENST00000516665 KRTAP25-1Q3LHN0 102 aa-2.14□□□□□ -2.75
RNU6-539P-201ENST00000516665 LRRC10Q5BKY1 277 aa-2.14□□□□□ -2.75
RNU6-539P-201ENST00000516665 PRR5LQ6MZQ0 368 aa-2.14□□□□□ -2.75
RNU6-539P-201ENST00000516665 KLHL35Q6PF15 583 aa-2.14□□□□□ -2.75
RNU6-539P-201ENST00000516665 CEMP1Q6PRD7 247 aaPredicted RBP-2.14□□□□□ -2.75
RNU6-539P-201ENST00000516665 TBPL2Q6SJ96 375 aa-2.14□□□□□ -2.75
RNU6-539P-201ENST00000516665 UNQ6190/PRO20217Q6UXQ8 127 aa-2.14□□□□□ -2.75
RNU6-539P-201ENST00000516665 C11orf57Q6ZUT1 292 aaPredicted RBP-2.14□□□□□ -2.75
RNU6-539P-201ENST00000516665 PRPF39Q86UA1 669 aaKnown RBP-2.14□□□□□ -2.75
RNU6-539P-201ENST00000516665 C17orf64Q86WR6 236 aa-2.14□□□□□ -2.75
RNU6-539P-201ENST00000516665 CHCHD4Q8N4Q1 142 aa-2.14□□□□□ -2.75
RNU6-539P-201ENST00000516665 CCDC197Q8NCU1 140 aa-2.14□□□□□ -2.75
RNU6-539P-201ENST00000516665 GOLGA5Q8TBA6 731 aa-2.14□□□□□ -2.75
RNU6-539P-201ENST00000516665 ACTRT1Q8TDG2 376 aa-2.14□□□□□ -2.75
RNU6-539P-201ENST00000516665 SEPT8Q92599 483 aa-2.14□□□□□ -2.75
RNU6-539P-201ENST00000516665 TNFRSF14Q92956 283 aa-2.14□□□□□ -2.75
RNU6-539P-201ENST00000516665 PGAM5Q96HS1 289 aa-2.14□□□□□ -2.75
RNU6-539P-201ENST00000516665 SH2D4AQ9H788 454 aa-2.14□□□□□ -2.75
RNU6-539P-201ENST00000516665 UBQLN4Q9NRR5 601 aa-2.14□□□□□ -2.75
RNU6-539P-201ENST00000516665 MTCH1Q9NZJ7 389 aa-2.14□□□□□ -2.75
RNU6-539P-201ENST00000516665 SEC63Q9UGP8 760 aaKnown RBP-2.14□□□□□ -2.75
RNU6-539P-201ENST00000516665 RUVBL2Q9Y230 463 aaKnown RBP-2.14□□□□□ -2.75
RNU6-539P-201ENST00000516665 ZNF443Q9Y2A4 671 aaPredicted RBP-2.14□□□□□ -2.75
RNU6-539P-201ENST00000516665 CBY1Q9Y3M2 126 aa-2.14□□□□□ -2.75
RNU6-539P-201ENST00000516665 TDRD9Q8NDG6 1382 aaKnown RBP-2.14□□□□□ -2.75
RNU6-539P-201ENST00000516665 COL6A3P12111 3177 aa-2.15□□□□□ -2.75
RNU6-539P-201ENST00000516665 GPR75-ASB3A0A0A6YYF3 556 aa-2.15□□□□□ -2.75
RNU6-539P-201ENST00000516665 D6RAR5 112 aa-2.15□□□□□ -2.75
RNU6-539P-201ENST00000516665 CDS2O95674 445 aa-2.15□□□□□ -2.75
RNU6-539P-201ENST00000516665 TGM6O95932 706 aa-2.15□□□□□ -2.75
RNU6-539P-201ENST00000516665 LHBP01229 141 aa-2.15□□□□□ -2.75
RNU6-539P-201ENST00000516665 APCSP02743 223 aa-2.15□□□□□ -2.75
RNU6-539P-201ENST00000516665 LINGO3P0C6S8 592 aa-2.15□□□□□ -2.75
RNU6-539P-201ENST00000516665 ADRA1AP35348 466 aa-2.15□□□□□ -2.75
RNU6-539P-201ENST00000516665 SLC26A3P40879 764 aa-2.15□□□□□ -2.75
RNU6-539P-201ENST00000516665 ACOT2P49753 483 aa-2.15□□□□□ -2.75
RNU6-539P-201ENST00000516665 CCR4P51679 360 aa-2.15□□□□□ -2.75
RNU6-539P-201ENST00000516665 RPS6P62753 249 aaKnown RBP-2.15□□□□□ -2.75
RNU6-539P-201ENST00000516665 SLC34A1Q06495 639 aa-2.15□□□□□ -2.75
RNU6-539P-201ENST00000516665 ZFAND6Q6FIF0 208 aa-2.15□□□□□ -2.75
RNU6-539P-201ENST00000516665 STEAP1BQ6NZ63 245 aa-2.15□□□□□ -2.75
RNU6-539P-201ENST00000516665 NCCRP1Q6ZVX7 275 aaPredicted RBP-2.15□□□□□ -2.75
RNU6-539P-201ENST00000516665 GPR142Q7Z601 462 aa-2.15□□□□□ -2.75
RNU6-539P-201ENST00000516665 SLC35G3Q8N808 338 aa-2.15□□□□□ -2.75
RNU6-539P-201ENST00000516665 SLC26A7Q8TE54 656 aa-2.15□□□□□ -2.75
RNU6-539P-201ENST00000516665 SPATA33Q96N06 139 aa-2.15□□□□□ -2.75
RNU6-539P-201ENST00000516665 NAP1L3Q99457 506 aaPredicted RBP-2.15□□□□□ -2.75
RNU6-539P-201ENST00000516665 PAFAH2Q99487 392 aa-2.15□□□□□ -2.75
RNU6-539P-201ENST00000516665 PRMT1Q99873 361 aaKnown RBP-2.15□□□□□ -2.75
RNU6-539P-201ENST00000516665 SPZ1Q9BXG8 430 aa-2.15□□□□□ -2.75
RNU6-539P-201ENST00000516665 ABCG5Q9H222 651 aa-2.15□□□□□ -2.75
RNU6-539P-201ENST00000516665 SNX25Q9H3E2 840 aa-2.15□□□□□ -2.75
RNU6-539P-201ENST00000516665 TBC1D7Q9P0N9 293 aa-2.15□□□□□ -2.75
RNU6-539P-201ENST00000516665 KIF25Q9UIL4 384 aa-2.15□□□□□ -2.75
RNU6-539P-201ENST00000516665 KLK5Q9Y337 293 aaPredicted RBP-2.15□□□□□ -2.75
RNU6-539P-201ENST00000516665 MYOFQ9NZM1 2061 aa-2.15□□□□□ -2.75
RNU6-539P-201ENST00000516665 STARD9Q9P2P6 4700 aa-2.15□□□□□ -2.75
RNU6-539P-201ENST00000516665 BRWD1Q9NSI6 2320 aa-2.16□□□□□ -2.75
RNU6-539P-201ENST00000516665 ZNF644Q9H582 1327 aaPredicted RBP-2.16□□□□□ -2.75
RNU6-539P-201ENST00000516665 LOC102723996A0A087X1L8 192 aa-2.16□□□□□ -2.76
RNU6-539P-201ENST00000516665 A0A0D9SG42 100 aa-2.16□□□□□ -2.76
RNU6-539P-201ENST00000516665 TRBV7-9A0A0J9YWB2 115 aa-2.16□□□□□ -2.76
RNU6-539P-201ENST00000516665 SAGE2PA6NJ88 616 aa-2.16□□□□□ -2.76
RNU6-539P-201ENST00000516665 MFNGO00587 321 aa-2.16□□□□□ -2.76
RNU6-539P-201ENST00000516665 HLA-DQB1P01920 261 aa-2.16□□□□□ -2.76
RNU6-539P-201ENST00000516665 C1QCP02747 245 aa-2.16□□□□□ -2.76
RNU6-539P-201ENST00000516665 P04436 131 aa-2.16□□□□□ -2.76
RNU6-539P-201ENST00000516665 CLTBP09497 229 aa-2.16□□□□□ -2.76
RNU6-539P-201ENST00000516665 ZNF30P17039 623 aa-2.16□□□□□ -2.76
RNU6-539P-201ENST00000516665 SERPINB3P29508 390 aa-2.16□□□□□ -2.76
RNU6-539P-201ENST00000516665 ARRB1P49407 418 aaPredicted RBP-2.16□□□□□ -2.76
RNU6-539P-201ENST00000516665 MFAP4P55083 255 aa-2.16□□□□□ -2.76
RNU6-539P-201ENST00000516665 CDH8P55286 799 aa-2.16□□□□□ -2.76
RNU6-539P-201ENST00000516665 ARL4CP56559 192 aa-2.16□□□□□ -2.76
RNU6-539P-201ENST00000516665 ASIC1P78348 528 aa-2.16□□□□□ -2.76
RNU6-539P-201ENST00000516665 RIPK1Q13546 671 aa-2.16□□□□□ -2.76
RNU6-539P-201ENST00000516665 SMC1AQ14683 1233 aaKnown RBP-2.16□□□□□ -2.76
RNU6-539P-201ENST00000516665 MAD2L1BPQ15013 274 aaPredicted RBP-2.16□□□□□ -2.76
RNU6-539P-201ENST00000516665 GUCA2BQ16661 112 aa-2.16□□□□□ -2.76
RNU6-539P-201ENST00000516665 CBWD6Q4V339 395 aa-2.16□□□□□ -2.76
RNU6-539P-201ENST00000516665 CBWD3Q5JTY5 395 aa-2.16□□□□□ -2.76
RNU6-539P-201ENST00000516665 C1orf100Q5SVJ3 147 aa-2.16□□□□□ -2.76
RNU6-539P-201ENST00000516665 FAM201AQ5SY85 155 aa-2.16□□□□□ -2.76
RNU6-539P-201ENST00000516665 C1orf189Q5VU69 101 aa-2.16□□□□□ -2.76
RNU6-539P-201ENST00000516665 AP1ARQ63HQ0 302 aa-2.16□□□□□ -2.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms