RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 MARCH9Q86YJ5 346 aa6.98□□□□□ -1.29
SCARNA20.1-201ENST00000516009 CCDC71Q8IV32 467 aaPredicted RBP6.98□□□□□ -1.29
SCARNA20.1-201ENST00000516009 ENTHD1Q8IYW4 607 aa6.98□□□□□ -1.29
SCARNA20.1-201ENST00000516009 DND1Q8IYX4 353 aaKnown RBP6.98□□□□□ -1.29
SCARNA20.1-201ENST00000516009 IL22RA1Q8N6P7 574 aa6.98□□□□□ -1.29
SCARNA20.1-201ENST00000516009 CLDN22Q8N7P3 220 aa6.98□□□□□ -1.29
SCARNA20.1-201ENST00000516009 ELOA3Q8NG57 546 aa6.98□□□□□ -1.29
SCARNA20.1-201ENST00000516009 OR5W2Q8NH69 310 aa6.98□□□□□ -1.29
SCARNA20.1-201ENST00000516009 PFN4Q8NHR9 129 aa6.98□□□□□ -1.29
SCARNA20.1-201ENST00000516009 B4GALNT2Q8NHY0 566 aa6.98□□□□□ -1.29
SCARNA20.1-201ENST00000516009 ZNF563Q8TA94 476 aa6.98□□□□□ -1.29
SCARNA20.1-201ENST00000516009 CNIH3Q8TBE1 160 aa6.98□□□□□ -1.29
SCARNA20.1-201ENST00000516009 DUSP19Q8WTR2 217 aa6.98□□□□□ -1.29
SCARNA20.1-201ENST00000516009 ASB15Q8WXK1 588 aa6.98□□□□□ -1.29
SCARNA20.1-201ENST00000516009 ADAMTS14Q8WXS8 1223 aa6.98□□□□□ -1.29
SCARNA20.1-201ENST00000516009 OSTF1Q92882 214 aa6.98□□□□□ -1.29
SCARNA20.1-201ENST00000516009 NKD1Q969G9 470 aa6.98□□□□□ -1.29
SCARNA20.1-201ENST00000516009 C3orf49Q96BT1 292 aa6.98□□□□□ -1.29
SCARNA20.1-201ENST00000516009 BPIFA2Q96DR5 249 aa6.98□□□□□ -1.29
SCARNA20.1-201ENST00000516009 PHOX2BQ99453 314 aa6.98□□□□□ -1.29
SCARNA20.1-201ENST00000516009 ZNF426Q9BUY5 554 aa6.98□□□□□ -1.29
SCARNA20.1-201ENST00000516009 RTN4RQ9BZR6 473 aa6.98□□□□□ -1.29
SCARNA20.1-201ENST00000516009 CDCP1Q9H5V8 836 aa6.98□□□□□ -1.29
SCARNA20.1-201ENST00000516009 METTL7AQ9H8H3 244 aa6.98□□□□□ -1.29
SCARNA20.1-201ENST00000516009 HHATLQ9HCP6 504 aa6.98□□□□□ -1.29
SCARNA20.1-201ENST00000516009 SDHAF3Q9NRP4 125 aa6.98□□□□□ -1.29
SCARNA20.1-201ENST00000516009 RASSF1Q9NS23 344 aa6.98□□□□□ -1.29
SCARNA20.1-201ENST00000516009 P4HTMQ9NXG6 502 aa6.98□□□□□ -1.29
SCARNA20.1-201ENST00000516009 SCN3BQ9NY72 215 aa6.98□□□□□ -1.29
SCARNA20.1-201ENST00000516009 KLRF1Q9NZS2 232 aa6.98□□□□□ -1.29
SCARNA20.1-201ENST00000516009 ICAM5Q9UMF0 924 aa6.98□□□□□ -1.29
SCARNA20.1-201ENST00000516009 RNF6Q9Y252 685 aa6.98□□□□□ -1.29
SCARNA20.1-201ENST00000516009 YARS2Q9Y2Z4 477 aaKnown RBP6.98□□□□□ -1.29
SCARNA20.1-201ENST00000516009 CNOT1A5YKK6 2376 aaKnown RBP6.98□□□□□ -1.29
SCARNA20.1-201ENST00000516009 WDFY3Q8IZQ1 3526 aa6.97□□□□□ -1.29
SCARNA20.1-201ENST00000516009 FAM186AA6NE01 2351 aa6.97□□□□□ -1.29
SCARNA20.1-201ENST00000516009 A0A087WXM4 84 aa6.97□□□□□ -1.29
SCARNA20.1-201ENST00000516009 HTR3EA5X5Y0 456 aa6.97□□□□□ -1.29
SCARNA20.1-201ENST00000516009 TRIM64A6NGJ6 449 aa6.97□□□□□ -1.29
SCARNA20.1-201ENST00000516009 UNC119BA6NIH7 251 aa6.97□□□□□ -1.29
SCARNA20.1-201ENST00000516009 ENO4A6NNW6 628 aa6.97□□□□□ -1.29
SCARNA20.1-201ENST00000516009 CDRT15L2A8MXV6 281 aa6.97□□□□□ -1.29
SCARNA20.1-201ENST00000516009 GNB5O14775 395 aa6.97□□□□□ -1.29
SCARNA20.1-201ENST00000516009 SLC30A4O14863 429 aa6.97□□□□□ -1.29
SCARNA20.1-201ENST00000516009 KLF4O43474 513 aa6.97□□□□□ -1.29
SCARNA20.1-201ENST00000516009 GMFGO60234 142 aa6.97□□□□□ -1.29
SCARNA20.1-201ENST00000516009 CDC40O60508 579 aaKnown RBP eCLIP6.97□□□□□ -1.29
SCARNA20.1-201ENST00000516009 FAM20BO75063 409 aa6.97□□□□□ -1.29
SCARNA20.1-201ENST00000516009 RCBTB2O95199 551 aa6.97□□□□□ -1.29
SCARNA20.1-201ENST00000516009 SERPINA7P05543 415 aa6.97□□□□□ -1.29
SCARNA20.1-201ENST00000516009 SAGP10523 405 aaPredicted RBP6.97□□□□□ -1.29
SCARNA20.1-201ENST00000516009 GP1BBP13224 206 aa6.97□□□□□ -1.29
SCARNA20.1-201ENST00000516009 ATP6V1B1P15313 513 aa6.97□□□□□ -1.29
SCARNA20.1-201ENST00000516009 CRHBPP24387 322 aa6.97□□□□□ -1.29
SCARNA20.1-201ENST00000516009 MSX1P28360 303 aa6.97□□□□□ -1.29
SCARNA20.1-201ENST00000516009 FMO3P31513 532 aa6.97□□□□□ -1.29
SCARNA20.1-201ENST00000516009 SOX3P41225 446 aa6.97□□□□□ -1.29
SCARNA20.1-201ENST00000516009 GIPRP48546 466 aa6.97□□□□□ -1.29
SCARNA20.1-201ENST00000516009 HLCSP50747 726 aa6.97□□□□□ -1.29
SCARNA20.1-201ENST00000516009 SSR4P51571 173 aa6.97□□□□□ -1.29
SCARNA20.1-201ENST00000516009 SMSP52788 366 aa6.97□□□□□ -1.29
SCARNA20.1-201ENST00000516009 CDH15P55291 814 aa6.97□□□□□ -1.29
SCARNA20.1-201ENST00000516009 SUMO3P55854 103 aaPredicted RBP6.97□□□□□ -1.29
SCARNA20.1-201ENST00000516009 MLF1P58340 268 aa6.97□□□□□ -1.29
SCARNA20.1-201ENST00000516009 GABARAPL2P60520 117 aa6.97□□□□□ -1.29
SCARNA20.1-201ENST00000516009 CSNK2BP67870 215 aa6.97□□□□□ -1.29
SCARNA20.1-201ENST00000516009 TUBA4AP68366 448 aa6.97□□□□□ -1.29
SCARNA20.1-201ENST00000516009 TEKQ02763 1124 aa6.97□□□□□ -1.29
SCARNA20.1-201ENST00000516009 CRYZQ08257 329 aaKnown RBP6.97□□□□□ -1.29
SCARNA20.1-201ENST00000516009 CHAF1BQ13112 559 aa6.97□□□□□ -1.29
SCARNA20.1-201ENST00000516009 IL10RAQ13651 578 aa6.97□□□□□ -1.29
SCARNA20.1-201ENST00000516009 ZNF791Q3KP31 576 aaPredicted RBP6.97□□□□□ -1.29
SCARNA20.1-201ENST00000516009 C12orf73Q69YU5 71 aa6.97□□□□□ -1.29
SCARNA20.1-201ENST00000516009 FCRLBQ6BAA4 426 aa6.97□□□□□ -1.29
SCARNA20.1-201ENST00000516009 LAIR2Q6ISS4 152 aa6.97□□□□□ -1.29
SCARNA20.1-201ENST00000516009 RPL13AP3Q6NVV1 102 aa6.97□□□□□ -1.29
SCARNA20.1-201ENST00000516009 SLC27A4Q6P1M0 643 aa6.97□□□□□ -1.29
SCARNA20.1-201ENST00000516009 ZNF620Q6ZNG0 422 aa6.97□□□□□ -1.29
SCARNA20.1-201ENST00000516009 PTCHD4Q6ZW05 846 aa6.97□□□□□ -1.29
SCARNA20.1-201ENST00000516009 TMPRSS7Q7RTY8 843 aa6.97□□□□□ -1.29
SCARNA20.1-201ENST00000516009 ATG4DQ86TL0 474 aaPredicted RBP6.97□□□□□ -1.29
SCARNA20.1-201ENST00000516009 KIF18BQ86Y91 864 aa6.97□□□□□ -1.29
SCARNA20.1-201ENST00000516009 P3H2Q8IVL5 708 aa6.97□□□□□ -1.29
SCARNA20.1-201ENST00000516009 ARMC10Q8N2F6 343 aa6.97□□□□□ -1.29
SCARNA20.1-201ENST00000516009 TMEM156Q8N614 296 aa6.97□□□□□ -1.29
SCARNA20.1-201ENST00000516009 IQCF1Q8N6M8 205 aa6.97□□□□□ -1.29
SCARNA20.1-201ENST00000516009 BPIFB6Q8NFQ5 453 aa6.97□□□□□ -1.29
SCARNA20.1-201ENST00000516009 OR10G3Q8NGC4 313 aa6.97□□□□□ -1.29
SCARNA20.1-201ENST00000516009 RHOXF1Q8NHV9 184 aa6.97□□□□□ -1.29
SCARNA20.1-201ENST00000516009 RNF138Q8WVD3 245 aa6.97□□□□□ -1.29
SCARNA20.1-201ENST00000516009 TRUB1Q8WWH5 349 aaKnown RBP6.97□□□□□ -1.29
SCARNA20.1-201ENST00000516009 TMEM234Q8WY98 164 aa6.97□□□□□ -1.29
SCARNA20.1-201ENST00000516009 PCSK5Q92824 1860 aa6.97□□□□□ -1.29
SCARNA20.1-201ENST00000516009 UBE2FQ969M7 185 aa6.97□□□□□ -1.29
SCARNA20.1-201ENST00000516009 ZNF566Q969W8 418 aa6.97□□□□□ -1.29
SCARNA20.1-201ENST00000516009 KIAA1143Q96AT1 154 aaPredicted RBP6.97□□□□□ -1.29
SCARNA20.1-201ENST00000516009 IP6K3Q96PC2 410 aa6.97□□□□□ -1.29
SCARNA20.1-201ENST00000516009 TSSK6Q9BXA6 273 aa6.97□□□□□ -1.29
SCARNA20.1-201ENST00000516009 TEX12Q9BXU0 123 aa6.97□□□□□ -1.29
SCARNA20.1-201ENST00000516009 PRRG3Q9BZD7 231 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms