RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, human

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNA-223	ENST00000515459	MLC1	Q15049	377 aa		13.87	□□□□□ -0.19
LMNA-223	ENST00000515459	QPRT	Q15274	297 aa		13.87	□□□□□ -0.19
LMNA-223	ENST00000515459	NDUFAF6	Q330K2	333 aa		13.87	□□□□□ -0.19
LMNA-223	ENST00000515459	DCST2	Q5T1A1	773 aa		13.87	□□□□□ -0.19
LMNA-223	ENST00000515459	FBXW9	Q5XUX1	488 aa		13.87	□□□□□ -0.19
LMNA-223	ENST00000515459	CLEC6A	Q6EIG7	209 aa		13.87	□□□□□ -0.19
LMNA-223	ENST00000515459	ZNF544	Q6NX49	715 aa		13.87	□□□□□ -0.19
LMNA-223	ENST00000515459	CDC73	Q6P1J9	531 aa		13.87	□□□□□ -0.19
LMNA-223	ENST00000515459	R3HCC1L	Q7Z5L2	792 aa	Known RBP	13.87	□□□□□ -0.19
LMNA-223	ENST00000515459	UBE2J2	Q8N2K1	259 aa		13.87	□□□□□ -0.19
LMNA-223	ENST00000515459	TMCO5A	Q8N6Q1	288 aa		13.87	□□□□□ -0.19
LMNA-223	ENST00000515459	ZNF614	Q8N883	585 aa		13.87	□□□□□ -0.19
LMNA-223	ENST00000515459	TOR1AIP2	Q8NFQ8	470 aa		13.87	□□□□□ -0.19
LMNA-223	ENST00000515459	OR5W2	Q8NH69	310 aa		13.87	□□□□□ -0.19
LMNA-223	ENST00000515459	ADAMTS15	Q8TE58	950 aa		13.87	□□□□□ -0.19
LMNA-223	ENST00000515459	ZNF524	Q96C55	264 aa		13.87	□□□□□ -0.19
LMNA-223	ENST00000515459	MTERF3	Q96E29	417 aa		13.87	□□□□□ -0.19
LMNA-223	ENST00000515459	FCRL1	Q96LA6	429 aa		13.87	□□□□□ -0.19
LMNA-223	ENST00000515459	INPP5K	Q9BT40	448 aa		13.87	□□□□□ -0.19
LMNA-223	ENST00000515459	ACTRT3	Q9BYD9	372 aa		13.87	□□□□□ -0.19
LMNA-223	ENST00000515459	SIRT3	Q9NTG7	399 aa	Predicted RBP	13.87	□□□□□ -0.19
LMNA-223	ENST00000515459	EMC3	Q9P0I2	261 aa		13.87	□□□□□ -0.19
LMNA-223	ENST00000515459	BAIAP2L1	Q9UHR4	511 aa		13.87	□□□□□ -0.19
LMNA-223	ENST00000515459	EMCN	Q9ULC0	261 aa		13.87	□□□□□ -0.19
LMNA-223	ENST00000515459	DTNA	Q9Y4J8	743 aa		13.87	□□□□□ -0.19
LMNA-223	ENST00000515459	SLC25A15	Q9Y619	301 aa		13.87	□□□□□ -0.19
LMNA-223	ENST00000515459	MALRD1	Q5VYJ5	2156 aa		13.86	□□□□□ -0.19
LMNA-223	ENST00000515459	CCT8L1P	A6NM43	557 aa		13.86	□□□□□ -0.19
LMNA-223	ENST00000515459	ETV2	O00321	342 aa	Predicted RBP	13.86	□□□□□ -0.19
LMNA-223	ENST00000515459	ZNF264	O43296	627 aa		13.86	□□□□□ -0.19
LMNA-223	ENST00000515459	EIF4E2	O60573	245 aa	Known RBP	13.86	□□□□□ -0.19
LMNA-223	ENST00000515459	H6PD	O95479	791 aa		13.86	□□□□□ -0.19
LMNA-223	ENST00000515459	IGHV3-9	P01782	118 aa		13.86	□□□□□ -0.19
LMNA-223	ENST00000515459	DDX5	P17844	614 aa	Known RBP	13.86	□□□□□ -0.19
LMNA-223	ENST00000515459	IGFBP5	P24593	272 aa		13.86	□□□□□ -0.19
LMNA-223	ENST00000515459	GZMK	P49863	264 aa		13.86	□□□□□ -0.19
LMNA-223	ENST00000515459	DIO1	P49895	249 aa		13.86	□□□□□ -0.19
LMNA-223	ENST00000515459	CCR4	P51679	360 aa		13.86	□□□□□ -0.19
LMNA-223	ENST00000515459	EFNA4	P52798	201 aa		13.86	□□□□□ -0.19
LMNA-223	ENST00000515459	RPL38	P63173	70 aa	Known RBP	13.86	□□□□□ -0.19
LMNA-223	ENST00000515459	CHRNB3	Q05901	458 aa		13.86	□□□□□ -0.19
LMNA-223	ENST00000515459	TIGD2	Q4W5G0	525 aa		13.86	□□□□□ -0.19
LMNA-223	ENST00000515459	RFTN2	Q52LD8	501 aa	Predicted RBP	13.86	□□□□□ -0.19
LMNA-223	ENST00000515459	B3GLCT	Q6Y288	498 aa		13.86	□□□□□ -0.19
LMNA-223	ENST00000515459	KCNS2	Q9ULS6	477 aa		13.86	□□□□□ -0.19
LMNA-223	ENST00000515459	HEATR1	Q9H583	2144 aa	Known RBP	13.85	□□□□□ -0.19
LMNA-223	ENST00000515459		A0A1W2PR80	420 aa		13.85	□□□□□ -0.19
LMNA-223	ENST00000515459	NPIPB9	F8W1W9	429 aa		13.85	□□□□□ -0.19
LMNA-223	ENST00000515459		M0R1B8	84 aa		13.85	□□□□□ -0.19
LMNA-223	ENST00000515459	SULT2B1	O00204	365 aa		13.85	□□□□□ -0.19
LMNA-223	ENST00000515459	GLRA3	O75311	464 aa		13.85	□□□□□ -0.19
LMNA-223	ENST00000515459	UBL4A	P11441	157 aa		13.85	□□□□□ -0.19
LMNA-223	ENST00000515459	NEFH	P12036	1026 aa		13.85	□□□□□ -0.19
LMNA-223	ENST00000515459	ASMT	P46597	345 aa		13.85	□□□□□ -0.19
LMNA-223	ENST00000515459	DNAJB13	P59910	316 aa		13.85	□□□□□ -0.19
LMNA-223	ENST00000515459	CSNK2A1	P68400	391 aa	Predicted RBP	13.85	□□□□□ -0.19
LMNA-223	ENST00000515459	SRSF2	Q01130	221 aa	Known RBP	13.85	□□□□□ -0.19
LMNA-223	ENST00000515459	PDK3	Q15120	406 aa		13.85	□□□□□ -0.19
LMNA-223	ENST00000515459	FAM120AOS	Q5T036	256 aa		13.85	□□□□□ -0.19
LMNA-223	ENST00000515459	FAM166A	Q6J272	317 aa		13.85	□□□□□ -0.19
LMNA-223	ENST00000515459	TMPPE	Q6ZT21	453 aa		13.85	□□□□□ -0.19
LMNA-223	ENST00000515459	OR2T11	Q8NH01	316 aa		13.85	□□□□□ -0.19
LMNA-223	ENST00000515459	APH1A	Q96BI3	265 aa		13.85	□□□□□ -0.19
LMNA-223	ENST00000515459	QRSL1	Q9H0R6	528 aa	Known RBP	13.85	□□□□□ -0.19
LMNA-223	ENST00000515459	CHODL	Q9H9P2	273 aa		13.85	□□□□□ -0.19
LMNA-223	ENST00000515459	SERINC1	Q9NRX5	453 aa		13.85	□□□□□ -0.19
LMNA-223	ENST00000515459	ASB6	Q9NWX5	421 aa		13.85	□□□□□ -0.19
LMNA-223	ENST00000515459	TAS2R16	Q9NYV7	291 aa		13.85	□□□□□ -0.19
LMNA-223	ENST00000515459	FAF1	Q9UNN5	650 aa	Predicted RBP	13.85	□□□□□ -0.19
LMNA-223	ENST00000515459	NOSIP	Q9Y314	301 aa	Known RBP	13.85	□□□□□ -0.19
LMNA-223	ENST00000515459	TMED5	Q9Y3A6	229 aa		13.85	□□□□□ -0.19
LMNA-223	ENST00000515459	PMF1-BGLAP	U3KQ54	211 aa		13.85	□□□□□ -0.19
LMNA-223	ENST00000515459	IGKV3D-15	A0A087WSY6	115 aa		13.84	□□□□□ -0.19
LMNA-223	ENST00000515459	ESPN	B1AK53	854 aa		13.84	□□□□□ -0.19
LMNA-223	ENST00000515459	KRT16	P08779	473 aa		13.84	□□□□□ -0.19
LMNA-223	ENST00000515459	HNF1A	P20823	631 aa		13.84	□□□□□ -0.19
LMNA-223	ENST00000515459	CCT3	P49368	545 aa	Known RBP	13.84	□□□□□ -0.19
LMNA-223	ENST00000515459	TP53BP2	Q13625	1128 aa		13.84	□□□□□ -0.19
LMNA-223	ENST00000515459	GALNTL6	Q49A17	601 aa		13.84	□□□□□ -0.19
LMNA-223	ENST00000515459	ABLIM2	Q6H8Q1	611 aa		13.84	□□□□□ -0.19
LMNA-223	ENST00000515459	OR7E24	Q6IFN5	339 aa		13.84	□□□□□ -0.19
LMNA-223	ENST00000515459	RNF165	Q6ZSG1	346 aa		13.84	□□□□□ -0.19
LMNA-223	ENST00000515459	IL17REL	Q6ZVW7	336 aa		13.84	□□□□□ -0.19
LMNA-223	ENST00000515459	MTDH	Q86UE4	582 aa	Known RBP	13.84	□□□□□ -0.19
LMNA-223	ENST00000515459	CNPY4	Q8N129	248 aa		13.84	□□□□□ -0.19
LMNA-223	ENST00000515459	OR56A1	Q8NGH5	318 aa		13.84	□□□□□ -0.19
LMNA-223	ENST00000515459	ST8SIA1	Q92185	356 aa		13.84	□□□□□ -0.19
LMNA-223	ENST00000515459	ANP32B	Q92688	251 aa	Known RBP	13.84	□□□□□ -0.19
LMNA-223	ENST00000515459	MUS81	Q96NY9	551 aa		13.84	□□□□□ -0.19
LMNA-223	ENST00000515459	PSMC3IP	Q9P2W1	217 aa	Predicted RBP	13.84	□□□□□ -0.19
LMNA-223	ENST00000515459	TBK1	Q9UHD2	729 aa		13.84	□□□□□ -0.19
LMNA-223	ENST00000515459	FIS1	Q9Y3D6	152 aa		13.84	□□□□□ -0.19
LMNA-223	ENST00000515459	ATP23	Q9Y6H3	246 aa		13.84	□□□□□ -0.19
LMNA-223	ENST00000515459	KCNE3	Q9Y6H6	103 aa		13.84	□□□□□ -0.19
LMNA-223	ENST00000515459	SVEP1	Q4LDE5	3571 aa		13.83	□□□□□ -0.2
LMNA-223	ENST00000515459	LOC100289279	A0A1B0GTE1	492 aa		13.83	□□□□□ -0.2
LMNA-223	ENST00000515459	SLC35F4	A4IF30	521 aa		13.83	□□□□□ -0.2
LMNA-223	ENST00000515459	AZIN1	O14977	448 aa		13.83	□□□□□ -0.2
LMNA-223	ENST00000515459	LSM1	O15116	133 aa	Known RBP	13.83	□□□□□ -0.2
LMNA-223	ENST00000515459	LY6H	O94772	140 aa		13.83	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms