RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 ERP44Q9BS26 406 aa3.54□□□□□ -1.84
HMGCS1-207ENST00000514610 OR51J1Q9H342 316 aa3.54□□□□□ -1.84
HMGCS1-207ENST00000514610 RMND5AQ9H871 391 aa3.54□□□□□ -1.84
HMGCS1-207ENST00000514610 MARCH5Q9NX47 278 aa3.54□□□□□ -1.84
HMGCS1-207ENST00000514610 AIPL1Q9NZN9 384 aa3.54□□□□□ -1.84
HMGCS1-207ENST00000514610 ERVW-1Q9UQF0 538 aa3.54□□□□□ -1.84
HMGCS1-207ENST00000514610 RASD1Q9Y272 281 aa3.54□□□□□ -1.84
HMGCS1-207ENST00000514610 PLLPQ9Y342 182 aa3.54□□□□□ -1.84
HMGCS1-207ENST00000514610 MAD1L1Q9Y6D9 718 aa3.54□□□□□ -1.84
HMGCS1-207ENST00000514610 IGKV6D-41A0A0C4DH26 115 aa3.53□□□□□ -1.84
HMGCS1-207ENST00000514610 NPIPA7E9PJI5 369 aa3.53□□□□□ -1.84
HMGCS1-207ENST00000514610 SLITRK3O94933 977 aa3.53□□□□□ -1.84
HMGCS1-207ENST00000514610 ADCY5O95622 1261 aa3.53□□□□□ -1.84
HMGCS1-207ENST00000514610 PTMAP06454 111 aaKnown RBP3.53□□□□□ -1.84
HMGCS1-207ENST00000514610 NPIPA8P0DM63 369 aa3.53□□□□□ -1.84
HMGCS1-207ENST00000514610 HNF1AP20823 631 aa3.53□□□□□ -1.84
HMGCS1-207ENST00000514610 PSMA5P28066 241 aa3.53□□□□□ -1.84
HMGCS1-207ENST00000514610 CHI3L1P36222 383 aaPredicted RBP3.53□□□□□ -1.84
HMGCS1-207ENST00000514610 RBMXP38159 391 aaKnown RBP3.53□□□□□ -1.84
HMGCS1-207ENST00000514610 LEPP41159 167 aa3.53□□□□□ -1.84
HMGCS1-207ENST00000514610 P2RY1P47900 373 aa3.53□□□□□ -1.84
HMGCS1-207ENST00000514610 PPT1P50897 306 aa3.53□□□□□ -1.84
HMGCS1-207ENST00000514610 RPS14P62263 151 aaKnown RBP3.53□□□□□ -1.84
HMGCS1-207ENST00000514610 HERPUD1Q15011 391 aa3.53□□□□□ -1.84
HMGCS1-207ENST00000514610 CFAP221Q4G0U5 840 aa3.53□□□□□ -1.84
HMGCS1-207ENST00000514610 TTC23Q5W5X9 447 aa3.53□□□□□ -1.84
HMGCS1-207ENST00000514610 FAM220AQ7Z4H9 259 aa3.53□□□□□ -1.84
HMGCS1-207ENST00000514610 KRTAP11-1Q8IUC1 163 aa3.53□□□□□ -1.84
HMGCS1-207ENST00000514610 DHRSXQ8N5I4 330 aa3.53□□□□□ -1.84
HMGCS1-207ENST00000514610 GMCL1P1Q8NEA9 526 aa3.53□□□□□ -1.84
HMGCS1-207ENST00000514610 OR2L5Q8NG80 312 aa3.53□□□□□ -1.84
HMGCS1-207ENST00000514610 OR10A7Q8NGE5 316 aa3.53□□□□□ -1.84
HMGCS1-207ENST00000514610 OR4D9Q8NGE8 314 aa3.53□□□□□ -1.84
HMGCS1-207ENST00000514610 OR56B4Q8NH76 319 aa3.53□□□□□ -1.84
HMGCS1-207ENST00000514610 OR1F12Q8NHA8 337 aa3.53□□□□□ -1.84
HMGCS1-207ENST00000514610 MARC2Q969Z3 335 aa3.53□□□□□ -1.84
HMGCS1-207ENST00000514610 NICN1Q9BSH3 213 aa3.53□□□□□ -1.84
HMGCS1-207ENST00000514610 EDEM2Q9BV94 578 aa3.53□□□□□ -1.84
HMGCS1-207ENST00000514610 NAT10Q9H0A0 1025 aaKnown RBP3.53□□□□□ -1.84
HMGCS1-207ENST00000514610 SLC17A5Q9NRA2 495 aa3.53□□□□□ -1.84
HMGCS1-207ENST00000514610 IL36GQ9NZH8 169 aa3.53□□□□□ -1.84
HMGCS1-207ENST00000514610 NPIPA1Q9UND3 350 aa3.53□□□□□ -1.84
HMGCS1-207ENST00000514610 MRPS33Q9Y291 106 aaKnown RBP3.53□□□□□ -1.84
HMGCS1-207ENST00000514610 AK6Q9Y3D8 172 aaKnown RBP3.53□□□□□ -1.84
HMGCS1-207ENST00000514610 TDRD6O60522 2096 aaKnown RBP3.52□□□□□ -1.85
HMGCS1-207ENST00000514610 A0A0G2JRQ6 117 aa3.52□□□□□ -1.85
HMGCS1-207ENST00000514610 K7EQM0 130 aa3.52□□□□□ -1.85
HMGCS1-207ENST00000514610 TAPBPO15533 448 aa3.52□□□□□ -1.85
HMGCS1-207ENST00000514610 RS1O15537 224 aa3.52□□□□□ -1.85
HMGCS1-207ENST00000514610 ZNF264O43296 627 aa3.52□□□□□ -1.85
HMGCS1-207ENST00000514610 HCN1O60741 890 aa3.52□□□□□ -1.85
HMGCS1-207ENST00000514610 UGT2B17O75795 530 aa3.52□□□□□ -1.85
HMGCS1-207ENST00000514610 LRATO95237 230 aa3.52□□□□□ -1.85
HMGCS1-207ENST00000514610 UGT2B4P06133 528 aa3.52□□□□□ -1.85
HMGCS1-207ENST00000514610 MMP11P24347 488 aa3.52□□□□□ -1.85
HMGCS1-207ENST00000514610 HOXD10P28358 340 aa3.52□□□□□ -1.85
HMGCS1-207ENST00000514610 NTSP30990 170 aa3.52□□□□□ -1.85
HMGCS1-207ENST00000514610 BTDP43251 543 aa3.52□□□□□ -1.85
HMGCS1-207ENST00000514610 CBX1P83916 185 aa3.52□□□□□ -1.85
HMGCS1-207ENST00000514610 IL17AQ16552 155 aa3.52□□□□□ -1.85
HMGCS1-207ENST00000514610 TPD52L1Q16890 204 aaPredicted RBP3.52□□□□□ -1.85
HMGCS1-207ENST00000514610 SLC25A52Q3SY17 297 aa3.52□□□□□ -1.85
HMGCS1-207ENST00000514610 CCDC14Q49A88 953 aa3.52□□□□□ -1.85
HMGCS1-207ENST00000514610 C10orf120Q5SQS8 335 aa3.52□□□□□ -1.85
HMGCS1-207ENST00000514610 UNQ9370/PRO34162Q6UXP9 181 aa3.52□□□□□ -1.85
HMGCS1-207ENST00000514610 MOB3BQ86TA1 216 aa3.52□□□□□ -1.85
HMGCS1-207ENST00000514610 ERI1Q8IV48 349 aaKnown RBP3.52□□□□□ -1.85
HMGCS1-207ENST00000514610 SVOPLQ8N434 492 aa3.52□□□□□ -1.85
HMGCS1-207ENST00000514610 ANKFN1Q8N957 763 aa3.52□□□□□ -1.85
HMGCS1-207ENST00000514610 ZNF540Q8NDQ6 660 aa3.52□□□□□ -1.85
HMGCS1-207ENST00000514610 IPMKQ8NFU5 416 aa3.52□□□□□ -1.85
HMGCS1-207ENST00000514610 C7orf33Q8WU49 177 aa3.52□□□□□ -1.85
HMGCS1-207ENST00000514610 SH3YL1Q96HL8 342 aaPredicted RBP3.52□□□□□ -1.85
HMGCS1-207ENST00000514610 TTC25Q96NG3 672 aa3.52□□□□□ -1.85
HMGCS1-207ENST00000514610 SMIM14Q96QK8 99 aa3.52□□□□□ -1.85
HMGCS1-207ENST00000514610 TBX15Q96SF7 602 aa3.52□□□□□ -1.85
HMGCS1-207ENST00000514610 ZNF607Q96SK3 696 aa3.52□□□□□ -1.85
HMGCS1-207ENST00000514610 ZNF385DQ9H6B1 395 aa3.52□□□□□ -1.85
HMGCS1-207ENST00000514610 NANSQ9NR45 359 aa3.52□□□□□ -1.85
HMGCS1-207ENST00000514610 ANAPC11Q9NYG5 84 aa3.52□□□□□ -1.85
HMGCS1-207ENST00000514610 ATRXP46100 2492 aa3.51□□□□□ -1.85
HMGCS1-207ENST00000514610 MBLAC1A4D2B0 266 aaPredicted RBP3.51□□□□□ -1.85
HMGCS1-207ENST00000514610 PRRG1O14668 218 aa3.51□□□□□ -1.85
HMGCS1-207ENST00000514610 EMC8O43402 210 aa3.51□□□□□ -1.85
HMGCS1-207ENST00000514610 KIAA0754O94854 1291 aa3.51□□□□□ -1.85
HMGCS1-207ENST00000514610 ALOX5P09917 674 aa3.51□□□□□ -1.85
HMGCS1-207ENST00000514610 RNH1P13489 461 aaKnown RBP3.51□□□□□ -1.85
HMGCS1-207ENST00000514610 POLR2EP19388 210 aaKnown RBP3.51□□□□□ -1.85
HMGCS1-207ENST00000514610 OTX2P32243 289 aa3.51□□□□□ -1.85
HMGCS1-207ENST00000514610 RIPK4P57078 832 aa3.51□□□□□ -1.85
HMGCS1-207ENST00000514610 SLC10A7Q0GE19 358 aa3.51□□□□□ -1.85
HMGCS1-207ENST00000514610 C1orf61Q13536 156 aa3.51□□□□□ -1.85
HMGCS1-207ENST00000514610 OTPQ5XKR4 325 aa3.51□□□□□ -1.85
HMGCS1-207ENST00000514610 ATL3Q6DD88 541 aa3.51□□□□□ -1.85
HMGCS1-207ENST00000514610 WDR74Q6RFH5 385 aaPredicted RBP3.51□□□□□ -1.85
HMGCS1-207ENST00000514610 NRMQ8IXM6 262 aa3.51□□□□□ -1.85
HMGCS1-207ENST00000514610 MTURNQ8N3F0 131 aa3.51□□□□□ -1.85
HMGCS1-207ENST00000514610 TMEM252Q8N6L7 170 aa3.51□□□□□ -1.85
HMGCS1-207ENST00000514610 ALLCQ8N6M5 410 aa3.51□□□□□ -1.85
HMGCS1-207ENST00000514610 SYT14Q8NB59 555 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms