RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 MAB21L1Q13394 359 aa6.85□□□□□ -1.31
CLIP1-205ENST00000514271 RPS6KA2Q15349 733 aa6.85□□□□□ -1.31
CLIP1-205ENST00000514271 FCN2Q15485 313 aa6.85□□□□□ -1.31
CLIP1-205ENST00000514271 TUSC1Q2TAM9 212 aa6.85□□□□□ -1.31
CLIP1-205ENST00000514271 ZNF684Q5T5D7 378 aa6.85□□□□□ -1.31
CLIP1-205ENST00000514271 PXDC1Q5TGL8 231 aa6.85□□□□□ -1.31
CLIP1-205ENST00000514271 SLCO4C1Q6ZQN7 724 aa6.85□□□□□ -1.31
CLIP1-205ENST00000514271 FGD2Q7Z6J4 655 aa6.85□□□□□ -1.31
CLIP1-205ENST00000514271 AMZ2Q86W34 360 aa6.85□□□□□ -1.31
CLIP1-205ENST00000514271 SERPINA9Q86WD7 417 aa6.85□□□□□ -1.31
CLIP1-205ENST00000514271 MCATQ8IVS2 390 aaKnown RBP6.85□□□□□ -1.31
CLIP1-205ENST00000514271 OR4A15Q8NGL6 344 aa6.85□□□□□ -1.31
CLIP1-205ENST00000514271 DDOQ99489 341 aa6.85□□□□□ -1.31
CLIP1-205ENST00000514271 EGLN1Q9GZT9 426 aa6.85□□□□□ -1.31
CLIP1-205ENST00000514271 RANBP3Q9H6Z4 567 aaPredicted RBP6.85□□□□□ -1.31
CLIP1-205ENST00000514271 PLSCR4Q9NRQ2 329 aa6.85□□□□□ -1.31
CLIP1-205ENST00000514271 ENOPH1Q9UHY7 261 aa6.85□□□□□ -1.31
CLIP1-205ENST00000514271 ZNF223Q9UK11 482 aaPredicted RBP6.85□□□□□ -1.31
CLIP1-205ENST00000514271 POMT2Q9UKY4 750 aa6.85□□□□□ -1.31
CLIP1-205ENST00000514271 DTX4Q9Y2E6 619 aa6.85□□□□□ -1.31
CLIP1-205ENST00000514271 PCDHGA9Q9Y5G4 932 aaKnown RBP6.85□□□□□ -1.31
CLIP1-205ENST00000514271 RNF222A6NCQ9 220 aa6.85□□□□□ -1.31
CLIP1-205ENST00000514271 B4E171 279 aa6.85□□□□□ -1.31
CLIP1-205ENST00000514271 FAM227AF5H4B4 570 aa6.85□□□□□ -1.31
CLIP1-205ENST00000514271 HMGN4O00479 90 aa6.85□□□□□ -1.31
CLIP1-205ENST00000514271 CDX4O14627 284 aaPredicted RBP6.85□□□□□ -1.31
CLIP1-205ENST00000514271 SURF4O15260 269 aa6.85□□□□□ -1.31
CLIP1-205ENST00000514271 HPGDSO60760 199 aa6.85□□□□□ -1.31
CLIP1-205ENST00000514271 SLC19A2O60779 497 aa6.85□□□□□ -1.31
CLIP1-205ENST00000514271 TSPAN9O75954 239 aa6.85□□□□□ -1.31
CLIP1-205ENST00000514271 HPP00738 406 aa6.85□□□□□ -1.31
CLIP1-205ENST00000514271 EIF4EP06730 217 aaKnown RBP6.85□□□□□ -1.31
CLIP1-205ENST00000514271 PIRTP0C851 137 aa6.85□□□□□ -1.31
CLIP1-205ENST00000514271 CD59P13987 128 aa6.85□□□□□ -1.31
CLIP1-205ENST00000514271 PRKACAP17612 351 aa6.85□□□□□ -1.31
CLIP1-205ENST00000514271 TNFRSF1BP20333 461 aa6.85□□□□□ -1.31
CLIP1-205ENST00000514271 DGKAP23743 735 aa6.85□□□□□ -1.31
CLIP1-205ENST00000514271 CCT3P49368 545 aaKnown RBP6.85□□□□□ -1.31
CLIP1-205ENST00000514271 HNRNPA0Q13151 305 aaKnown RBP6.85□□□□□ -1.31
CLIP1-205ENST00000514271 EIF3IQ13347 325 aaKnown RBP6.85□□□□□ -1.31
CLIP1-205ENST00000514271 DYRK1AQ13627 763 aa6.85□□□□□ -1.31
CLIP1-205ENST00000514271 ATP13A5Q4VNC0 1218 aa6.85□□□□□ -1.31
CLIP1-205ENST00000514271 C14orf28Q4W4Y0 310 aa6.85□□□□□ -1.31
CLIP1-205ENST00000514271 FRMD1Q8N878 549 aa6.85□□□□□ -1.31
CLIP1-205ENST00000514271 GPR156Q8NFN8 814 aa6.85□□□□□ -1.31
CLIP1-205ENST00000514271 SLC7A13Q8TCU3 470 aa6.85□□□□□ -1.31
CLIP1-205ENST00000514271 ACOT12Q8WYK0 555 aa6.85□□□□□ -1.31
CLIP1-205ENST00000514271 OR1E3Q8WZA6 343 aa6.85□□□□□ -1.31
CLIP1-205ENST00000514271 LRRC61Q9BV99 259 aa6.85□□□□□ -1.31
CLIP1-205ENST00000514271 SLC5A10A0PJK1 596 aa6.85□□□□□ -1.31
CLIP1-205ENST00000514271 TM4SF5O14894 197 aa6.85□□□□□ -1.31
CLIP1-205ENST00000514271 NOS1APO75052 506 aaPredicted RBP6.85□□□□□ -1.31
CLIP1-205ENST00000514271 APOA1P02647 267 aa6.85□□□□□ -1.31
CLIP1-205ENST00000514271 TNNI3P19429 210 aa6.85□□□□□ -1.31
CLIP1-205ENST00000514271 SHBQ15464 509 aa6.85□□□□□ -1.31
CLIP1-205ENST00000514271 LCN1P1Q5VSP4 162 aa6.85□□□□□ -1.31
CLIP1-205ENST00000514271 PRAMEF8Q5VWM4 474 aa6.85□□□□□ -1.31
CLIP1-205ENST00000514271 PRAMEF7Q5VXH5 474 aa6.85□□□□□ -1.31
CLIP1-205ENST00000514271 FAM151BQ6UXP7 276 aa6.85□□□□□ -1.31
CLIP1-205ENST00000514271 FAM129CQ86XR2 697 aa6.85□□□□□ -1.31
CLIP1-205ENST00000514271 ASZ1Q8WWH4 475 aa6.85□□□□□ -1.31
CLIP1-205ENST00000514271 MRPS24Q96EL2 167 aaKnown RBP6.85□□□□□ -1.31
CLIP1-205ENST00000514271 PPA2Q9H2U2 334 aa6.85□□□□□ -1.31
CLIP1-205ENST00000514271 RUVBL1Q9Y265 456 aaKnown RBP6.85□□□□□ -1.31
CLIP1-205ENST00000514271 RPL36Q9Y3U8 105 aaKnown RBP6.85□□□□□ -1.31
CLIP1-205ENST00000514271 CHTOPQ9Y3Y2 248 aaKnown RBP6.85□□□□□ -1.31
CLIP1-205ENST00000514271 SCN2AQ99250 2005 aa6.84□□□□□ -1.31
CLIP1-205ENST00000514271 A0A1W2PRB8 838 aa6.84□□□□□ -1.31
CLIP1-205ENST00000514271 F3P13726 295 aa6.84□□□□□ -1.31
CLIP1-205ENST00000514271 ETFAP13804 333 aa6.84□□□□□ -1.31
CLIP1-205ENST00000514271 GLB1P16278 677 aa6.84□□□□□ -1.31
CLIP1-205ENST00000514271 RPS4Y1P22090 263 aaKnown RBP6.84□□□□□ -1.31
CLIP1-205ENST00000514271 MMP11P24347 488 aa6.84□□□□□ -1.31
CLIP1-205ENST00000514271 MPGP29372 298 aa6.84□□□□□ -1.31
CLIP1-205ENST00000514271 RGS4P49798 205 aa6.84□□□□□ -1.31
CLIP1-205ENST00000514271 SELENOPP49908 381 aa6.84□□□□□ -1.31
CLIP1-205ENST00000514271 DCAF7P61962 342 aa6.84□□□□□ -1.31
CLIP1-205ENST00000514271 LSM11P83369 360 aaKnown RBP eCLIP6.84□□□□□ -1.31
CLIP1-205ENST00000514271 SLC5A12Q1EHB4 618 aa6.84□□□□□ -1.31
CLIP1-205ENST00000514271 HFEQ30201 348 aa6.84□□□□□ -1.31
CLIP1-205ENST00000514271 HBMQ6B0K9 141 aa6.84□□□□□ -1.31
CLIP1-205ENST00000514271 TAGAPQ8N103 731 aa6.84□□□□□ -1.31
CLIP1-205ENST00000514271 TBC1D19Q8N5T2 526 aa6.84□□□□□ -1.31
CLIP1-205ENST00000514271 AQP11Q8NBQ7 271 aa6.84□□□□□ -1.31
CLIP1-205ENST00000514271 CLHC1Q8NHS4 586 aa6.84□□□□□ -1.31
CLIP1-205ENST00000514271 RBPMSQ93062 196 aaKnown RBP6.84□□□□□ -1.31
CLIP1-205ENST00000514271 EXT2Q93063 718 aa6.84□□□□□ -1.31
CLIP1-205ENST00000514271 SGCZQ96LD1 299 aa6.84□□□□□ -1.31
CLIP1-205ENST00000514271 FOPNLQ96NB1 174 aa6.84□□□□□ -1.31
CLIP1-205ENST00000514271 H2AFJQ9BTM1 129 aa6.84□□□□□ -1.31
CLIP1-205ENST00000514271 TSSK6Q9BXA6 273 aa6.84□□□□□ -1.31
CLIP1-205ENST00000514271 RHBGQ9H310 441 aa6.84□□□□□ -1.31
CLIP1-205ENST00000514271 ANKRD19PQ9H560 264 aa6.84□□□□□ -1.31
CLIP1-205ENST00000514271 FGF22Q9HCT0 170 aa6.84□□□□□ -1.31
CLIP1-205ENST00000514271 C12orf4Q9NQ89 552 aa6.84□□□□□ -1.31
CLIP1-205ENST00000514271 MED17Q9NVC6 651 aa6.84□□□□□ -1.31
CLIP1-205ENST00000514271 ST6GALNAC2Q9UJ37 374 aa6.84□□□□□ -1.31
CLIP1-205ENST00000514271 KLHL20Q9Y2M5 609 aa6.84□□□□□ -1.31
CLIP1-205ENST00000514271 KCNE2Q9Y6J6 123 aa6.84□□□□□ -1.31
CLIP1-205ENST00000514271 A0A1W2PQ72 361 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms