RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 EID3Q8N140 333 aa6.88□□□□□ -1.31
HMGXB3-204ENST00000513318 GHDCQ8N2G8 530 aa6.88□□□□□ -1.31
HMGXB3-204ENST00000513318 CLIP4Q8N3C7 705 aa6.88□□□□□ -1.31
HMGXB3-204ENST00000513318 GPR32P1Q8NGA4 272 aa6.88□□□□□ -1.31
HMGXB3-204ENST00000513318 OR52E4Q8NGH9 312 aa6.88□□□□□ -1.31
HMGXB3-204ENST00000513318 OR14L1PQ8NHC6 308 aa6.88□□□□□ -1.31
HMGXB3-204ENST00000513318 CPT1CQ8TCG5 803 aa6.88□□□□□ -1.31
HMGXB3-204ENST00000513318 GPR119Q8TDV5 335 aa6.88□□□□□ -1.31
HMGXB3-204ENST00000513318 TMEM234Q8WY98 164 aa6.88□□□□□ -1.31
HMGXB3-204ENST00000513318 ST8SIA1Q92185 356 aa6.88□□□□□ -1.31
HMGXB3-204ENST00000513318 POP5Q969H6 163 aaKnown RBP6.88□□□□□ -1.31
HMGXB3-204ENST00000513318 ZBTB8AQ96BR9 441 aa6.88□□□□□ -1.31
HMGXB3-204ENST00000513318 CLPTM1LQ96KA5 538 aa6.88□□□□□ -1.31
HMGXB3-204ENST00000513318 GPR137Q96N19 417 aa6.88□□□□□ -1.31
HMGXB3-204ENST00000513318 RSPO3Q9BXY4 272 aaPredicted RBP6.88□□□□□ -1.31
HMGXB3-204ENST00000513318 CADM1Q9BY67 442 aaKnown RBP6.88□□□□□ -1.31
HMGXB3-204ENST00000513318 PCDHAC1Q9H158 963 aa6.88□□□□□ -1.31
HMGXB3-204ENST00000513318 LDAHQ9H6V9 325 aa6.88□□□□□ -1.31
HMGXB3-204ENST00000513318 DCAF13Q9NV06 445 aaKnown RBP6.88□□□□□ -1.31
HMGXB3-204ENST00000513318 MED17Q9NVC6 651 aa6.88□□□□□ -1.31
HMGXB3-204ENST00000513318 ASF1BQ9NVP2 202 aa6.88□□□□□ -1.31
HMGXB3-204ENST00000513318 TAS2R10Q9NYW0 307 aa6.88□□□□□ -1.31
HMGXB3-204ENST00000513318 TESQ9UGI8 421 aaKnown RBP6.88□□□□□ -1.31
HMGXB3-204ENST00000513318 SAMD4AQ9UPU9 718 aaKnown RBP6.88□□□□□ -1.31
HMGXB3-204ENST00000513318 VDAC3Q9Y277 283 aa6.88□□□□□ -1.31
HMGXB3-204ENST00000513318 CACNA1CQ13936 2221 aa6.88□□□□□ -1.31
HMGXB3-204ENST00000513318 FREM1Q5H8C1 2179 aa6.87□□□□□ -1.31
HMGXB3-204ENST00000513318 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.87□□□□□ -1.31
HMGXB3-204ENST00000513318 TRGV5A0A0B4J1U4 118 aa6.87□□□□□ -1.31
HMGXB3-204ENST00000513318 A0A1B0GVC2 190 aa6.87□□□□□ -1.31
HMGXB3-204ENST00000513318 B8ZZF3 427 aa6.87□□□□□ -1.31
HMGXB3-204ENST00000513318 NPIPA5E9PKD4 350 aa6.87□□□□□ -1.31
HMGXB3-204ENST00000513318 LINC01387J3KSC0 135 aa6.87□□□□□ -1.31
HMGXB3-204ENST00000513318 ETV2O00321 342 aaPredicted RBP6.87□□□□□ -1.31
HMGXB3-204ENST00000513318 AQP7O14520 342 aa6.87□□□□□ -1.31
HMGXB3-204ENST00000513318 FRS3O43559 492 aa6.87□□□□□ -1.31
HMGXB3-204ENST00000513318 KALRNO60229 2985 aa6.87□□□□□ -1.31
HMGXB3-204ENST00000513318 SUSD5O60279 629 aa6.87□□□□□ -1.31
HMGXB3-204ENST00000513318 ZIC3O60481 467 aa6.87□□□□□ -1.31
HMGXB3-204ENST00000513318 CDC40O60508 579 aaKnown RBP eCLIP6.87□□□□□ -1.31
HMGXB3-204ENST00000513318 HCN1O60741 890 aa6.87□□□□□ -1.31
HMGXB3-204ENST00000513318 FMO6PO60774 539 aa6.87□□□□□ -1.31
HMGXB3-204ENST00000513318 ADAM11O75078 769 aa6.87□□□□□ -1.31
HMGXB3-204ENST00000513318 C1QL1O75973 258 aa6.87□□□□□ -1.31
HMGXB3-204ENST00000513318 ZNF682O95780 498 aa6.87□□□□□ -1.31
HMGXB3-204ENST00000513318 EPPINO95925 133 aa6.87□□□□□ -1.31
HMGXB3-204ENST00000513318 CELA3AP09093 270 aa6.87□□□□□ -1.31
HMGXB3-204ENST00000513318 GKN3PP0CG01 181 aa6.87□□□□□ -1.31
HMGXB3-204ENST00000513318 GP1BBP13224 206 aa6.87□□□□□ -1.31
HMGXB3-204ENST00000513318 EDN3P14138 238 aa6.87□□□□□ -1.31
HMGXB3-204ENST00000513318 PRKCAP17252 672 aa6.87□□□□□ -1.31
HMGXB3-204ENST00000513318 HK1P19367 917 aa6.87□□□□□ -1.31
HMGXB3-204ENST00000513318 ATP6V1B2P21281 511 aa6.87□□□□□ -1.31
HMGXB3-204ENST00000513318 CHMP24386 653 aa6.87□□□□□ -1.31
HMGXB3-204ENST00000513318 MST1P26927 711 aa6.87□□□□□ -1.31
HMGXB3-204ENST00000513318 ELK4P28324 431 aa6.87□□□□□ -1.31
HMGXB3-204ENST00000513318 RYKP34925 604 aa6.87□□□□□ -1.31
HMGXB3-204ENST00000513318 EIF1P41567 113 aaKnown RBP6.87□□□□□ -1.31
HMGXB3-204ENST00000513318 ACAA2P42765 397 aaKnown RBP6.87□□□□□ -1.31
HMGXB3-204ENST00000513318 HTR3AP46098 478 aa6.87□□□□□ -1.31
HMGXB3-204ENST00000513318 ZNF136P52737 540 aa6.87□□□□□ -1.31
HMGXB3-204ENST00000513318 MLLT10P55197 1068 aa6.87□□□□□ -1.31
HMGXB3-204ENST00000513318 DLX5P56178 289 aa6.87□□□□□ -1.31
HMGXB3-204ENST00000513318 COPZ1P61923 177 aa6.87□□□□□ -1.31
HMGXB3-204ENST00000513318 FLOT2Q14254 428 aa6.87□□□□□ -1.31
HMGXB3-204ENST00000513318 QPRTQ15274 297 aa6.87□□□□□ -1.31
HMGXB3-204ENST00000513318 ZSCAN26Q16670 478 aa6.87□□□□□ -1.31
HMGXB3-204ENST00000513318 IFI44LQ53G44 452 aa6.87□□□□□ -1.31
HMGXB3-204ENST00000513318 SLC25A53Q5H9E4 307 aa6.87□□□□□ -1.31
HMGXB3-204ENST00000513318 WIPI1Q5MNZ9 446 aaPredicted RBP6.87□□□□□ -1.31
HMGXB3-204ENST00000513318 ARHGAP11AQ6P4F7 1023 aa6.87□□□□□ -1.31
HMGXB3-204ENST00000513318 AAGABQ6PD74 315 aa6.87□□□□□ -1.31
HMGXB3-204ENST00000513318 ARSKQ6UWY0 536 aa6.87□□□□□ -1.31
HMGXB3-204ENST00000513318 GRINAQ7Z429 371 aa6.87□□□□□ -1.31
HMGXB3-204ENST00000513318 COMTD1Q86VU5 262 aa6.87□□□□□ -1.31
HMGXB3-204ENST00000513318 DHFR2Q86XF0 187 aa6.87□□□□□ -1.31
HMGXB3-204ENST00000513318 SPPL2CQ8IUH8 684 aa6.87□□□□□ -1.31
HMGXB3-204ENST00000513318 GTPBP8Q8N3Z3 284 aaPredicted RBP6.87□□□□□ -1.31
HMGXB3-204ENST00000513318 ZNF843Q8N446 348 aa6.87□□□□□ -1.31
HMGXB3-204ENST00000513318 ZNF563Q8TA94 476 aa6.87□□□□□ -1.31
HMGXB3-204ENST00000513318 NEIL3Q8TAT5 605 aa6.87□□□□□ -1.31
HMGXB3-204ENST00000513318 GEMIN6Q8WXD5 167 aaKnown RBP6.87□□□□□ -1.31
HMGXB3-204ENST00000513318 TPD52L3Q96J77 140 aa6.87□□□□□ -1.31
HMGXB3-204ENST00000513318 HSH2DQ96JZ2 352 aa6.87□□□□□ -1.31
HMGXB3-204ENST00000513318 MRGPRX4Q96LA9 322 aa6.87□□□□□ -1.31
HMGXB3-204ENST00000513318 LRGUKQ96M69 825 aa6.87□□□□□ -1.31
HMGXB3-204ENST00000513318 SFXN2Q96NB2 322 aa6.87□□□□□ -1.31
HMGXB3-204ENST00000513318 ARHGDIGQ99819 225 aa6.87□□□□□ -1.31
HMGXB3-204ENST00000513318 KLHDC3Q9BQ90 382 aa6.87□□□□□ -1.31
HMGXB3-204ENST00000513318 PIGQQ9BRB3 760 aa6.87□□□□□ -1.31
HMGXB3-204ENST00000513318 TRIM15Q9C019 465 aa6.87□□□□□ -1.31
HMGXB3-204ENST00000513318 DEFB127Q9H1M4 99 aa6.87□□□□□ -1.31
HMGXB3-204ENST00000513318 SLC6A15Q9H2J7 730 aa6.87□□□□□ -1.31
HMGXB3-204ENST00000513318 EXO5Q9H790 373 aa6.87□□□□□ -1.31
HMGXB3-204ENST00000513318 SLC7A8Q9UHI5 535 aa6.87□□□□□ -1.31
HMGXB3-204ENST00000513318 NPIPA1Q9UND3 350 aa6.87□□□□□ -1.31
HMGXB3-204ENST00000513318 RPH3AQ9Y2J0 694 aaPredicted RBP6.87□□□□□ -1.31
HMGXB3-204ENST00000513318 SH3GLB1Q9Y371 365 aa6.87□□□□□ -1.31
HMGXB3-204ENST00000513318 LIPGQ9Y5X9 500 aa6.87□□□□□ -1.31
HMGXB3-204ENST00000513318 OR14I1A6ND48 311 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms