RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 AWAT1Q58HT5 328 aa10.12□□□□□ -0.79
RNF4-216ENST00000511859 SHISA2Q6UWI4 295 aa10.12□□□□□ -0.79
RNF4-216ENST00000511859 SLC46A3Q7Z3Q1 461 aa10.12□□□□□ -0.79
RNF4-216ENST00000511859 GATSQ8NAP1 163 aa10.12□□□□□ -0.79
RNF4-216ENST00000511859 TOR1AIP2Q8NFQ8 470 aa10.12□□□□□ -0.79
RNF4-216ENST00000511859 OR6Y1Q8NGX8 325 aa10.12□□□□□ -0.79
RNF4-216ENST00000511859 FBXO27Q8NI29 283 aa10.12□□□□□ -0.79
RNF4-216ENST00000511859 HOXB13Q92826 284 aaPredicted RBP10.12□□□□□ -0.79
RNF4-216ENST00000511859 NSUN5Q96P11 429 aaKnown RBP10.12□□□□□ -0.79
RNF4-216ENST00000511859 ZNF300Q96RE9 604 aaPredicted RBP10.12□□□□□ -0.79
RNF4-216ENST00000511859 C1QTNF6Q9BXI9 259 aa10.12□□□□□ -0.79
RNF4-216ENST00000511859 SAP130Q9H0E3 1048 aa10.12□□□□□ -0.79
RNF4-216ENST00000511859 A0A1W2PR80 420 aa10.11□□□□□ -0.79
RNF4-216ENST00000511859 B4DSR2 109 aa10.11□□□□□ -0.79
RNF4-216ENST00000511859 NKX2-2O95096 273 aa10.11□□□□□ -0.79
RNF4-216ENST00000511859 RBP1P09455 135 aa10.11□□□□□ -0.79
RNF4-216ENST00000511859 IL2RGP31785 369 aa10.11□□□□□ -0.79
RNF4-216ENST00000511859 SERPINF1P36955 418 aa10.11□□□□□ -0.79
RNF4-216ENST00000511859 MAP3K8P41279 467 aa10.11□□□□□ -0.79
RNF4-216ENST00000511859 ARFIP2P53365 341 aa10.11□□□□□ -0.79
RNF4-216ENST00000511859 ACSM2AQ08AH3 577 aa10.11□□□□□ -0.79
RNF4-216ENST00000511859 FOXF1Q12946 379 aa10.11□□□□□ -0.79
RNF4-216ENST00000511859 PDK3Q15120 406 aa10.11□□□□□ -0.79
RNF4-216ENST00000511859 GABRA6Q16445 453 aa10.11□□□□□ -0.79
RNF4-216ENST00000511859 ACSM2BQ68CK6 577 aa10.11□□□□□ -0.79
RNF4-216ENST00000511859 LETMD1Q6P1Q0 360 aa10.11□□□□□ -0.79
RNF4-216ENST00000511859 GALNT18Q6P9A2 607 aa10.11□□□□□ -0.79
RNF4-216ENST00000511859 MTERF4Q7Z6M4 381 aaKnown RBP10.11□□□□□ -0.79
RNF4-216ENST00000511859 C4orf33Q8N1A6 199 aa10.11□□□□□ -0.79
RNF4-216ENST00000511859 PLD6Q8N2A8 252 aaKnown RBP10.11□□□□□ -0.79
RNF4-216ENST00000511859 ANKS4BQ8N8V4 417 aa10.11□□□□□ -0.79
RNF4-216ENST00000511859 ATP6V1C2Q8NEY4 427 aa10.11□□□□□ -0.79
RNF4-216ENST00000511859 MZB1Q8WU39 189 aa10.11□□□□□ -0.79
RNF4-216ENST00000511859 APH1AQ96BI3 265 aa10.11□□□□□ -0.79
RNF4-216ENST00000511859 ARL8AQ96BM9 186 aa10.11□□□□□ -0.79
RNF4-216ENST00000511859 MRGPRX4Q96LA9 322 aa10.11□□□□□ -0.79
RNF4-216ENST00000511859 ROPN1BQ9BZX4 212 aaPredicted RBP10.11□□□□□ -0.79
RNF4-216ENST00000511859 GLIPR2Q9H4G4 154 aa10.11□□□□□ -0.79
RNF4-216ENST00000511859 ROPN1Q9HAT0 212 aaPredicted RBP10.11□□□□□ -0.79
RNF4-216ENST00000511859 EMC3Q9P0I2 261 aa10.11□□□□□ -0.79
RNF4-216ENST00000511859 AMDHD2Q9Y303 409 aa10.11□□□□□ -0.79
RNF4-216ENST00000511859 PCDHB14Q9Y5E9 798 aa10.11□□□□□ -0.79
RNF4-216ENST00000511859 ACTL7BQ9Y614 415 aa10.11□□□□□ -0.79
RNF4-216ENST00000511859 RGS16O15492 202 aaPredicted RBP10.1□□□□□ -0.79
RNF4-216ENST00000511859 ULK1O75385 1050 aa10.1□□□□□ -0.79
RNF4-216ENST00000511859 HSPA4LO95757 839 aa10.1□□□□□ -0.79
RNF4-216ENST00000511859 NUDT14O95848 222 aa10.1□□□□□ -0.79
RNF4-216ENST00000511859 KRT6AP02538 564 aa10.1□□□□□ -0.79
RNF4-216ENST00000511859 KRT6BP04259 564 aa10.1□□□□□ -0.79
RNF4-216ENST00000511859 ERCC1P07992 297 aaPredicted RBP10.1□□□□□ -0.79
RNF4-216ENST00000511859 PRPS2P11908 318 aa10.1□□□□□ -0.79
RNF4-216ENST00000511859 NTSP30990 170 aa10.1□□□□□ -0.79
RNF4-216ENST00000511859 SERPINB4P48594 390 aa10.1□□□□□ -0.79
RNF4-216ENST00000511859 KRT6CP48668 564 aa10.1□□□□□ -0.79
RNF4-216ENST00000511859 PRIM2P49643 509 aa10.1□□□□□ -0.79
RNF4-216ENST00000511859 IDH3GP51553 393 aaPredicted RBP10.1□□□□□ -0.79
RNF4-216ENST00000511859 P2RX1P51575 399 aa10.1□□□□□ -0.79
RNF4-216ENST00000511859 C2orf80Q0P641 193 aa10.1□□□□□ -0.79
RNF4-216ENST00000511859 SELENBP1Q13228 472 aa10.1□□□□□ -0.79
RNF4-216ENST00000511859 MIDNQ504T8 468 aa10.1□□□□□ -0.79
RNF4-216ENST00000511859 TECRLQ5HYJ1 363 aa10.1□□□□□ -0.79
RNF4-216ENST00000511859 LRIG3Q6UXM1 1119 aa10.1□□□□□ -0.79
RNF4-216ENST00000511859 TREML4Q6UXN2 200 aa10.1□□□□□ -0.79
RNF4-216ENST00000511859 HDXQ7Z353 690 aa10.1□□□□□ -0.79
RNF4-216ENST00000511859 GLCCI1Q86VQ1 547 aa10.1□□□□□ -0.79
RNF4-216ENST00000511859 C17orf78Q8N4C9 275 aa10.1□□□□□ -0.79
RNF4-216ENST00000511859 TEX29Q8N6K0 151 aa10.1□□□□□ -0.79
RNF4-216ENST00000511859 CDRT4Q8N9R6 151 aa10.1□□□□□ -0.79
RNF4-216ENST00000511859 CEP70Q8NHQ1 597 aa10.1□□□□□ -0.79
RNF4-216ENST00000511859 NEU4Q8WWR8 484 aaPredicted RBP10.1□□□□□ -0.79
RNF4-216ENST00000511859 AMDHD1Q96NU7 426 aa10.1□□□□□ -0.79
RNF4-216ENST00000511859 SNX18Q96RF0 628 aa10.1□□□□□ -0.79
RNF4-216ENST00000511859 KLHDC3Q9BQ90 382 aa10.1□□□□□ -0.79
RNF4-216ENST00000511859 TMEM109Q9BVC6 243 aa10.1□□□□□ -0.79
RNF4-216ENST00000511859 PPCSQ9HAB8 311 aa10.1□□□□□ -0.79
RNF4-216ENST00000511859 MIEF1Q9NQG6 463 aa10.1□□□□□ -0.79
RNF4-216ENST00000511859 SIRT5Q9NXA8 310 aa10.1□□□□□ -0.79
RNF4-216ENST00000511859 LGALS13Q9UHV8 139 aa10.1□□□□□ -0.79
RNF4-216ENST00000511859 WBP11Q9Y2W2 641 aaKnown RBP10.1□□□□□ -0.79
RNF4-216ENST00000511859 NOSIPQ9Y314 301 aaKnown RBP10.1□□□□□ -0.79
RNF4-216ENST00000511859 TRAF6Q9Y4K3 522 aa10.1□□□□□ -0.79
RNF4-216ENST00000511859 IGKV3D-15A0A087WSY6 115 aa10.09□□□□□ -0.79
RNF4-216ENST00000511859 A0A1W2PNR3 127 aa10.09□□□□□ -0.79
RNF4-216ENST00000511859 ATP6V1G2-DDX39BF2Z307 99 aa10.09□□□□□ -0.79
RNF4-216ENST00000511859 MANBAO00462 879 aa10.09□□□□□ -0.79
RNF4-216ENST00000511859 PPP6CO00743 305 aa10.09□□□□□ -0.79
RNF4-216ENST00000511859 SMIM24O75264 130 aa10.09□□□□□ -0.79
RNF4-216ENST00000511859 PDE5AO76074 875 aa10.09□□□□□ -0.79
RNF4-216ENST00000511859 KCNK2O95069 426 aa10.09□□□□□ -0.79
RNF4-216ENST00000511859 IGHV3-9P01782 118 aa10.09□□□□□ -0.79
RNF4-216ENST00000511859 ANXA4P09525 319 aaPredicted RBP10.09□□□□□ -0.79
RNF4-216ENST00000511859 DAOP14920 347 aa10.09□□□□□ -0.79
RNF4-216ENST00000511859 PRKCAP17252 672 aa10.09□□□□□ -0.79
RNF4-216ENST00000511859 PGCP20142 388 aa10.09□□□□□ -0.79
RNF4-216ENST00000511859 TIA1P31483 386 aaKnown RBP eCLIP10.09□□□□□ -0.795e-7■■■■□ 23.6
RNF4-216ENST00000511859 MAGEA12P43365 314 aa10.09□□□□□ -0.79
RNF4-216ENST00000511859 KHKP50053 298 aa10.09□□□□□ -0.79
RNF4-216ENST00000511859 PPOXP50336 477 aa10.09□□□□□ -0.79
RNF4-216ENST00000511859 SUMO3P55854 103 aaPredicted RBP10.09□□□□□ -0.79
RNF4-216ENST00000511859 CD226Q15762 336 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms