RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 MESP1Q9BRJ9 268 aa13.91□□□□□ -0.18
SCLT1-209ENST00000511426 POLDIP3Q9BY77 421 aaKnown RBP13.91□□□□□ -0.18
SCLT1-209ENST00000511426 WDR70Q9NW82 654 aa13.91□□□□□ -0.18
SCLT1-209ENST00000511426 RNF6Q9Y252 685 aa13.91□□□□□ -0.18
SCLT1-209ENST00000511426 SMIM31A0A1B0GVY4 71 aa13.9□□□□□ -0.18
SCLT1-209ENST00000511426 HCN1O60741 890 aa13.9□□□□□ -0.18
SCLT1-209ENST00000511426 SMNDC1O75940 238 aaKnown RBP eCLIP13.9□□□□□ -0.18
SCLT1-209ENST00000511426 OR2J2O76002 312 aa13.9□□□□□ -0.18
SCLT1-209ENST00000511426 TFAP2AP05549 437 aa13.9□□□□□ -0.18
SCLT1-209ENST00000511426 IFI30P13284 250 aa13.9□□□□□ -0.18
SCLT1-209ENST00000511426 POU1F1P28069 291 aa13.9□□□□□ -0.18
SCLT1-209ENST00000511426 RBMS1P29558 406 aaKnown RBP13.9□□□□□ -0.18
SCLT1-209ENST00000511426 TTKP33981 857 aa13.9□□□□□ -0.18
SCLT1-209ENST00000511426 DLSTP36957 453 aa13.9□□□□□ -0.18
SCLT1-209ENST00000511426 CCR4P51679 360 aa13.9□□□□□ -0.18
SCLT1-209ENST00000511426 MAP2K6P52564 334 aa13.9□□□□□ -0.18
SCLT1-209ENST00000511426 CLDN6P56747 220 aa13.9□□□□□ -0.18
SCLT1-209ENST00000511426 MEDAGQ5VYS4 303 aa13.9□□□□□ -0.18
SCLT1-209ENST00000511426 JMJD6Q6NYC1 403 aaPredicted RBP13.9□□□□□ -0.18
SCLT1-209ENST00000511426 CBLN3Q6UW01 205 aa13.9□□□□□ -0.18
SCLT1-209ENST00000511426 ATG4DQ86TL0 474 aaPredicted RBP13.9□□□□□ -0.18
SCLT1-209ENST00000511426 OR52L1Q8NGH7 329 aa13.9□□□□□ -0.18
SCLT1-209ENST00000511426 B4GALNT2Q8NHY0 566 aa13.9□□□□□ -0.18
SCLT1-209ENST00000511426 ZNF563Q8TA94 476 aa13.9□□□□□ -0.18
SCLT1-209ENST00000511426 RNF217Q8TC41 542 aa13.9□□□□□ -0.18
SCLT1-209ENST00000511426 ADAMTS14Q8WXS8 1223 aa13.9□□□□□ -0.18
SCLT1-209ENST00000511426 ADAM19Q9H013 955 aa13.9□□□□□ -0.18
SCLT1-209ENST00000511426 DUSP21Q9H596 190 aa13.9□□□□□ -0.18
SCLT1-209ENST00000511426 CPNE5Q9HCH3 593 aa13.9□□□□□ -0.18
SCLT1-209ENST00000511426 CNIH4Q9P003 139 aa13.9□□□□□ -0.18
SCLT1-209ENST00000511426 BAIAP2Q9UQB8 552 aa13.9□□□□□ -0.18
SCLT1-209ENST00000511426 NINQ8N4C6 2090 aa13.9□□□□□ -0.18
SCLT1-209ENST00000511426 PMS2P1A4D2B8 440 aa13.89□□□□□ -0.19
SCLT1-209ENST00000511426 UNC119BA6NIH7 251 aa13.89□□□□□ -0.19
SCLT1-209ENST00000511426 ELOA3DA6NLF2 546 aaPredicted RBP13.89□□□□□ -0.19
SCLT1-209ENST00000511426 SOX14O95416 240 aa13.89□□□□□ -0.19
SCLT1-209ENST00000511426 HMGN1P05114 100 aa13.89□□□□□ -0.19
SCLT1-209ENST00000511426 SERPINA7P05543 415 aa13.89□□□□□ -0.19
SCLT1-209ENST00000511426 BMP7P18075 431 aa13.89□□□□□ -0.19
SCLT1-209ENST00000511426 FOXD4Q12950 439 aaPredicted RBP13.89□□□□□ -0.19
SCLT1-209ENST00000511426 ZNF791Q3KP31 576 aaPredicted RBP13.89□□□□□ -0.19
SCLT1-209ENST00000511426 ELOA3BQ3SY89 546 aa13.89□□□□□ -0.19
SCLT1-209ENST00000511426 LAIR2Q6ISS4 152 aa13.89□□□□□ -0.19
SCLT1-209ENST00000511426 PTCHD4Q6ZW05 846 aa13.89□□□□□ -0.19
SCLT1-209ENST00000511426 MARCH3Q86UD3 253 aa13.89□□□□□ -0.19
SCLT1-209ENST00000511426 GPALPP1Q8IXQ4 340 aa13.89□□□□□ -0.19
SCLT1-209ENST00000511426 GATSQ8NAP1 163 aa13.89□□□□□ -0.19
SCLT1-209ENST00000511426 ELOA3Q8NG57 546 aa13.89□□□□□ -0.19
SCLT1-209ENST00000511426 CNIH3Q8TBE1 160 aa13.89□□□□□ -0.19
SCLT1-209ENST00000511426 LIPHQ8WWY8 451 aa13.89□□□□□ -0.19
SCLT1-209ENST00000511426 ST8SIA1Q92185 356 aa13.89□□□□□ -0.19
SCLT1-209ENST00000511426 CLN6Q9NWW5 311 aa13.89□□□□□ -0.19
SCLT1-209ENST00000511426 PCDHGB1Q9Y5G3 927 aa13.89□□□□□ -0.19
SCLT1-209ENST00000511426 SPAARA0A1B0GVQ0 90 aa13.88□□□□□ -0.19
SCLT1-209ENST00000511426 ANKUB1A6NFN9 424 aa13.88□□□□□ -0.19
SCLT1-209ENST00000511426 SNTNA6NMZ2 147 aa13.88□□□□□ -0.19
SCLT1-209ENST00000511426 CDRT15L2A8MXV6 281 aa13.88□□□□□ -0.19
SCLT1-209ENST00000511426 EFCAB9A8MZ26 197 aa13.88□□□□□ -0.19
SCLT1-209ENST00000511426 M0R3G1 203 aa13.88□□□□□ -0.19
SCLT1-209ENST00000511426 ADAM10O14672 748 aa13.88□□□□□ -0.19
SCLT1-209ENST00000511426 WBP4O75554 376 aaKnown RBP13.88□□□□□ -0.19
SCLT1-209ENST00000511426 ITGA10O75578 1167 aa13.88□□□□□ -0.19
SCLT1-209ENST00000511426 DXOO77932 396 aaKnown RBP13.88□□□□□ -0.19
SCLT1-209ENST00000511426 EEF1B2P24534 225 aaKnown RBP13.88□□□□□ -0.19
SCLT1-209ENST00000511426 OTX2P32243 289 aa13.88□□□□□ -0.19
SCLT1-209ENST00000511426 GPR4P46093 362 aa13.88□□□□□ -0.19
SCLT1-209ENST00000511426 PCYT1AP49585 367 aa13.88□□□□□ -0.19
SCLT1-209ENST00000511426 RNF144AP50876 292 aaPredicted RBP13.88□□□□□ -0.19
SCLT1-209ENST00000511426 FBXW4P57775 412 aa13.88□□□□□ -0.19
SCLT1-209ENST00000511426 GABREP78334 506 aa13.88□□□□□ -0.19
SCLT1-209ENST00000511426 SLC35A2P78381 396 aa13.88□□□□□ -0.19
SCLT1-209ENST00000511426 LSM11P83369 360 aaKnown RBP eCLIP13.88□□□□□ -0.19
SCLT1-209ENST00000511426 OCLNQ16625 522 aa13.88□□□□□ -0.19
SCLT1-209ENST00000511426 NDUFAF6Q330K2 333 aa13.88□□□□□ -0.19
SCLT1-209ENST00000511426 FAM69BQ5VUD6 431 aa13.88□□□□□ -0.19
SCLT1-209ENST00000511426 H3F3CQ6NXT2 135 aa13.88□□□□□ -0.19
SCLT1-209ENST00000511426 GRINAQ7Z429 371 aa13.88□□□□□ -0.19
SCLT1-209ENST00000511426 CYP4Z2PQ8N1L4 340 aa13.88□□□□□ -0.19
SCLT1-209ENST00000511426 FAM26EQ8N5C1 309 aa13.88□□□□□ -0.19
SCLT1-209ENST00000511426 OR2T33Q8NG76 320 aa13.88□□□□□ -0.19
SCLT1-209ENST00000511426 THAP3Q8WTV1 239 aaPredicted RBP13.88□□□□□ -0.19
SCLT1-209ENST00000511426 APH1BQ8WW43 257 aa13.88□□□□□ -0.19
SCLT1-209ENST00000511426 NODALQ96S42 347 aa13.88□□□□□ -0.19
SCLT1-209ENST00000511426 ZNF160Q9HCG1 818 aa13.88□□□□□ -0.19
SCLT1-209ENST00000511426 MEPEQ9NQ76 525 aaPredicted RBP13.88□□□□□ -0.19
SCLT1-209ENST00000511426 TBC1D23Q9NUY8 699 aa13.88□□□□□ -0.19
SCLT1-209ENST00000511426 ZNF226Q9NYT6 803 aa13.88□□□□□ -0.19
SCLT1-209ENST00000511426 VPS13AQ96RL7 3174 aa13.88□□□□□ -0.19
SCLT1-209ENST00000511426 EIF4E1BA6NMX2 242 aaKnown RBP13.88□□□□□ -0.19
SCLT1-209ENST00000511426 PIP5K1CO60331 668 aa13.88□□□□□ -0.19
SCLT1-209ENST00000511426 SAGP10523 405 aaPredicted RBP13.88□□□□□ -0.19
SCLT1-209ENST00000511426 GP1BBP13224 206 aa13.88□□□□□ -0.19
SCLT1-209ENST00000511426 ATP6V1B1P15313 513 aa13.88□□□□□ -0.19
SCLT1-209ENST00000511426 ITPKBP27987 946 aa13.88□□□□□ -0.19
SCLT1-209ENST00000511426 SSR4P51571 173 aa13.88□□□□□ -0.19
SCLT1-209ENST00000511426 GAS1P54826 345 aa13.88□□□□□ -0.19
SCLT1-209ENST00000511426 MLF1P58340 268 aa13.88□□□□□ -0.19
SCLT1-209ENST00000511426 MVKQ03426 396 aa13.88□□□□□ -0.19
SCLT1-209ENST00000511426 GINS1Q14691 196 aa13.88□□□□□ -0.19
SCLT1-209ENST00000511426 SLC30A6Q6NXT4 461 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms