RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 MNS1Q8NEH6 495 aa14.03□□□□□ -0.16
RAB40C-202ENST00000509637 OR5W2Q8NH69 310 aa14.03□□□□□ -0.16
RAB40C-202ENST00000509637 OR5P2Q8WZ92 322 aa14.03□□□□□ -0.16
RAB40C-202ENST00000509637 ZG16BQ96DA0 208 aa14.03□□□□□ -0.16
RAB40C-202ENST00000509637 CHMP6Q96FZ7 201 aa14.03□□□□□ -0.16
RAB40C-202ENST00000509637 C1orf50Q9BV19 199 aa14.03□□□□□ -0.16
RAB40C-202ENST00000509637 THUMPD3Q9BV44 507 aaKnown RBP14.03□□□□□ -0.16
RAB40C-202ENST00000509637 GRIP2Q9C0E4 1043 aa14.03□□□□□ -0.16
RAB40C-202ENST00000509637 SLC17A7Q9P2U7 560 aa14.03□□□□□ -0.16
RAB40C-202ENST00000509637 TRAF6Q9Y4K3 522 aa14.03□□□□□ -0.16
RAB40C-202ENST00000509637 ZNF716A6NP11 495 aa14.02□□□□□ -0.17
RAB40C-202ENST00000509637 GTPBP1O00178 669 aaKnown RBP14.02□□□□□ -0.17
RAB40C-202ENST00000509637 ABCD4O14678 606 aa14.02□□□□□ -0.17
RAB40C-202ENST00000509637 TLX2O43763 284 aaPredicted RBP14.02□□□□□ -0.17
RAB40C-202ENST00000509637 TRIM13O60858 407 aa14.02□□□□□ -0.17
RAB40C-202ENST00000509637 NEFHP12036 1026 aa14.02□□□□□ -0.17
RAB40C-202ENST00000509637 KRT4P19013 534 aa14.02□□□□□ -0.17
RAB40C-202ENST00000509637 CCT5P48643 541 aa14.02□□□□□ -0.17
RAB40C-202ENST00000509637 CASP9P55211 416 aa14.02□□□□□ -0.17
RAB40C-202ENST00000509637 HBA1P69905 142 aa14.02□□□□□ -0.17
RAB40C-202ENST00000509637 SRSF2Q01130 221 aaKnown RBP14.02□□□□□ -0.17
RAB40C-202ENST00000509637 SELENBP1Q13228 472 aa14.02□□□□□ -0.17
RAB40C-202ENST00000509637 ETFDHQ16134 617 aa14.02□□□□□ -0.17
RAB40C-202ENST00000509637 C6orf136Q5SQH8 315 aa14.02□□□□□ -0.17
RAB40C-202ENST00000509637 CLECL1Q8IZS7 167 aa14.02□□□□□ -0.17
RAB40C-202ENST00000509637 SLC43A2Q8N370 569 aa14.02□□□□□ -0.17
RAB40C-202ENST00000509637 ZNF614Q8N883 585 aa14.02□□□□□ -0.17
RAB40C-202ENST00000509637 CCDC63Q8NA47 563 aa14.02□□□□□ -0.17
RAB40C-202ENST00000509637 AGR3Q8TD06 166 aa14.02□□□□□ -0.17
RAB40C-202ENST00000509637 ADAMTS15Q8TE58 950 aa14.02□□□□□ -0.17
RAB40C-202ENST00000509637 REXO5Q96IC2 774 aaKnown RBP14.02□□□□□ -0.17
RAB40C-202ENST00000509637 ARL5BQ96KC2 179 aa14.02□□□□□ -0.17
RAB40C-202ENST00000509637 OR5B2Q96R09 309 aa14.02□□□□□ -0.17
RAB40C-202ENST00000509637 FANCFQ9NPI8 374 aa14.02□□□□□ -0.17
RAB40C-202ENST00000509637 TIGARQ9NQ88 270 aa14.02□□□□□ -0.17
RAB40C-202ENST00000509637 SLC25A15Q9Y619 301 aa14.02□□□□□ -0.17
RAB40C-202ENST00000509637 ARFGEF3Q5TH69 2177 aa14.02□□□□□ -0.17
RAB40C-202ENST00000509637 HEATR1Q9H583 2144 aaKnown RBP14.02□□□□□ -0.17
RAB40C-202ENST00000509637 PRAMEF27A3QJZ7 478 aa14.01□□□□□ -0.17
RAB40C-202ENST00000509637 SERINC4A6NH21 518 aa14.01□□□□□ -0.17
RAB40C-202ENST00000509637 OR5H1A6NKK0 313 aa14.01□□□□□ -0.17
RAB40C-202ENST00000509637 ZNF724A8MTY0 619 aa14.01□□□□□ -0.17
RAB40C-202ENST00000509637 KIF2AO00139 706 aaPredicted RBP14.01□□□□□ -0.17
RAB40C-202ENST00000509637 COPEO14579 308 aa14.01□□□□□ -0.17
RAB40C-202ENST00000509637 ZNF264O43296 627 aa14.01□□□□□ -0.17
RAB40C-202ENST00000509637 UGT2B17O75795 530 aa14.01□□□□□ -0.17
RAB40C-202ENST00000509637 LY6HO94772 140 aa14.01□□□□□ -0.17
RAB40C-202ENST00000509637 SLU7O95391 586 aaKnown RBP14.01□□□□□ -0.17
RAB40C-202ENST00000509637 FESP07332 822 aa14.01□□□□□ -0.17
RAB40C-202ENST00000509637 ATP6V1C1P21283 382 aa14.01□□□□□ -0.17
RAB40C-202ENST00000509637 ASMTP46597 345 aa14.01□□□□□ -0.17
RAB40C-202ENST00000509637 CDH11P55287 796 aa14.01□□□□□ -0.17
RAB40C-202ENST00000509637 PHC1P78364 1004 aa14.01□□□□□ -0.17
RAB40C-202ENST00000509637 ZNF141Q15928 474 aa14.01□□□□□ -0.17
RAB40C-202ENST00000509637 TIMM23BQ5SRD1 257 aa14.01□□□□□ -0.17
RAB40C-202ENST00000509637 IL23RQ5VWK5 629 aa14.01□□□□□ -0.17
RAB40C-202ENST00000509637 ABLIM2Q6H8Q1 611 aa14.01□□□□□ -0.17
RAB40C-202ENST00000509637 TMPPEQ6ZT21 453 aa14.01□□□□□ -0.17
RAB40C-202ENST00000509637 HMGN2P46Q86SG4 172 aa14.01□□□□□ -0.17
RAB40C-202ENST00000509637 DDIASQ8IXT1 998 aa14.01□□□□□ -0.17
RAB40C-202ENST00000509637 WDR31Q8NA23 367 aa14.01□□□□□ -0.17
RAB40C-202ENST00000509637 OR2W6PQ8NHA6 318 aa14.01□□□□□ -0.17
RAB40C-202ENST00000509637 C1QTNF6Q9BXI9 259 aa14.01□□□□□ -0.17
RAB40C-202ENST00000509637 CACNG6Q9BXT2 260 aa14.01□□□□□ -0.17
RAB40C-202ENST00000509637 LAT2Q9GZY6 243 aa14.01□□□□□ -0.17
RAB40C-202ENST00000509637 HOXD1Q9GZZ0 328 aa14.01□□□□□ -0.17
RAB40C-202ENST00000509637 KLHL9Q9P2J3 617 aa14.01□□□□□ -0.17
RAB40C-202ENST00000509637 ZDHHC2Q9UIJ5 367 aa14.01□□□□□ -0.17
RAB40C-202ENST00000509637 TMED5Q9Y3A6 229 aa14.01□□□□□ -0.17
RAB40C-202ENST00000509637 IGKV3D-15A0A087WSY6 115 aa14□□□□□ -0.17
RAB40C-202ENST00000509637 FAM234BA2RU67 622 aa14□□□□□ -0.17
RAB40C-202ENST00000509637 A8MV72 311 aaPredicted RBP14□□□□□ -0.17
RAB40C-202ENST00000509637 EIF4E2O60573 245 aaKnown RBP14□□□□□ -0.17
RAB40C-202ENST00000509637 HSPA4LO95757 839 aa14□□□□□ -0.17
RAB40C-202ENST00000509637 UBL4AP11441 157 aa14□□□□□ -0.17
RAB40C-202ENST00000509637 CREB1P16220 341 aa14□□□□□ -0.17
RAB40C-202ENST00000509637 TTKP33981 857 aa14□□□□□ -0.17
RAB40C-202ENST00000509637 DIO1P49895 249 aa14□□□□□ -0.17
RAB40C-202ENST00000509637 SLC25A3Q00325 362 aa14□□□□□ -0.17
RAB40C-202ENST00000509637 FUT5Q11128 374 aa14□□□□□ -0.17
RAB40C-202ENST00000509637 GPR68Q15743 365 aa14□□□□□ -0.17
RAB40C-202ENST00000509637 TMEM249Q2WGJ8 235 aa14□□□□□ -0.17
RAB40C-202ENST00000509637 C6orf52Q5T4I8 152 aa14□□□□□ -0.17
RAB40C-202ENST00000509637 R3HCC1LQ7Z5L2 792 aaKnown RBP14□□□□□ -0.17
RAB40C-202ENST00000509637 CCDC103Q8IW40 242 aa14□□□□□ -0.17
RAB40C-202ENST00000509637 ARIH2OSQ8N7S6 290 aa14□□□□□ -0.17
RAB40C-202ENST00000509637 OR52N5Q8NH56 324 aa14□□□□□ -0.17
RAB40C-202ENST00000509637 HHATLQ9HCP6 504 aa14□□□□□ -0.17
RAB40C-202ENST00000509637 NGBQ9NPG2 151 aa14□□□□□ -0.17
RAB40C-202ENST00000509637 MKLN1Q9UL63 735 aa14□□□□□ -0.17
RAB40C-202ENST00000509637 CLDN24A6NM45 220 aa13.99□□□□□ -0.17
RAB40C-202ENST00000509637 GJE1A6NN92 205 aa13.99□□□□□ -0.17
RAB40C-202ENST00000509637 PDLIM1O00151 329 aa13.99□□□□□ -0.17
RAB40C-202ENST00000509637 SCN2BO60939 215 aa13.99□□□□□ -0.17
RAB40C-202ENST00000509637 RAD51DO75771 328 aa13.99□□□□□ -0.17
RAB40C-202ENST00000509637 ITGA5P08648 1049 aa13.99□□□□□ -0.17
RAB40C-202ENST00000509637 GGT1P19440 569 aa13.99□□□□□ -0.17
RAB40C-202ENST00000509637 SLC7A1P30825 629 aa13.99□□□□□ -0.17
RAB40C-202ENST00000509637 PGM1P36871 562 aa13.99□□□□□ -0.17
RAB40C-202ENST00000509637 ZNF83P51522 516 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms