RNA–Protein interactions for RNA: ENST00000508343.1

TRIO-211, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 776 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-211ENST00000508343 SYNGR4O95473 234 aa13.51□□□□□ -0.25
TRIO-211ENST00000508343 BCHEP06276 602 aa13.51□□□□□ -0.25
TRIO-211ENST00000508343 HNRNPCL4P0DMR1 293 aa13.51□□□□□ -0.25
TRIO-211ENST00000508343 BMP2P12643 396 aa13.51□□□□□ -0.25
TRIO-211ENST00000508343 RPS4Y1P22090 263 aaKnown RBP13.51□□□□□ -0.25
TRIO-211ENST00000508343 PPIBP23284 216 aaKnown RBP13.51□□□□□ -0.25
TRIO-211ENST00000508343 SHC1P29353 583 aa13.51□□□□□ -0.25
TRIO-211ENST00000508343 SFTPDP35247 375 aa13.51□□□□□ -0.25
TRIO-211ENST00000508343 SLC6A8P48029 635 aa13.51□□□□□ -0.25
TRIO-211ENST00000508343 SESN3P58005 492 aa13.51□□□□□ -0.25
TRIO-211ENST00000508343 SELENBP1Q13228 472 aa13.51□□□□□ -0.25
TRIO-211ENST00000508343 PEX5LQ8IYB4 626 aa13.51□□□□□ -0.25
TRIO-211ENST00000508343 CNEP1R1Q8N9A8 125 aa13.51□□□□□ -0.25
TRIO-211ENST00000508343 ATP6V1C2Q8NEY4 427 aa13.51□□□□□ -0.25
TRIO-211ENST00000508343 TSPEARQ8WU66 669 aa13.51□□□□□ -0.25
TRIO-211ENST00000508343 WDR60Q8WVS4 1066 aa13.51□□□□□ -0.25
TRIO-211ENST00000508343 CNOT9Q92600 299 aaKnown RBP13.51□□□□□ -0.25
TRIO-211ENST00000508343 STARD4Q96DR4 205 aa13.51□□□□□ -0.25
TRIO-211ENST00000508343 TMEM19Q96HH6 336 aa13.51□□□□□ -0.25
TRIO-211ENST00000508343 A4GALTQ9NPC4 353 aa13.51□□□□□ -0.25
TRIO-211ENST00000508343 SERINC1Q9NRX5 453 aa13.51□□□□□ -0.25
TRIO-211ENST00000508343 LEF1Q9UJU2 399 aaPredicted RBP13.51□□□□□ -0.25
TRIO-211ENST00000508343 PACSIN3Q9UKS6 424 aa13.51□□□□□ -0.25
TRIO-211ENST00000508343 NDUFAF1Q9Y375 327 aa13.51□□□□□ -0.25
TRIO-211ENST00000508343 GMEB1Q9Y692 573 aa13.51□□□□□ -0.25
TRIO-211ENST00000508343 DSPPQ9NZW4 1301 aa13.5□□□□□ -0.25
TRIO-211ENST00000508343 TRBV5-3A0A0A0MS03 114 aa13.5□□□□□ -0.25
TRIO-211ENST00000508343 A8MXE2 369 aa13.5□□□□□ -0.25
TRIO-211ENST00000508343 NUDT7P0C024 238 aa13.5□□□□□ -0.25
TRIO-211ENST00000508343 NID1P14543 1247 aa13.5□□□□□ -0.25
TRIO-211ENST00000508343 RYKP34925 604 aa13.5□□□□□ -0.25
TRIO-211ENST00000508343 KIR2DL2P43627 348 aaPredicted RBP13.5□□□□□ -0.25
TRIO-211ENST00000508343 ARFIP2P53365 341 aa13.5□□□□□ -0.25
TRIO-211ENST00000508343 PLAURQ03405 335 aa13.5□□□□□ -0.25
TRIO-211ENST00000508343 MERTKQ12866 999 aa13.5□□□□□ -0.25
TRIO-211ENST00000508343 PRAMEF8Q5VWM4 474 aa13.5□□□□□ -0.25
TRIO-211ENST00000508343 PRAMEF7Q5VXH5 474 aa13.5□□□□□ -0.25
TRIO-211ENST00000508343 PPP4R4Q6NUP7 873 aa13.5□□□□□ -0.25
TRIO-211ENST00000508343 PLEKHM3Q6ZWE6 761 aa13.5□□□□□ -0.25
TRIO-211ENST00000508343 LUZP2Q86TE4 346 aa13.5□□□□□ -0.25
TRIO-211ENST00000508343 KIF18BQ86Y91 864 aa13.5□□□□□ -0.25
TRIO-211ENST00000508343 OR52P1PQ8NH57 321 aa13.5□□□□□ -0.25
TRIO-211ENST00000508343 ZNF563Q8TA94 476 aa13.5□□□□□ -0.25
TRIO-211ENST00000508343 RBM24Q9BX46 236 aaKnown RBP13.5□□□□□ -0.25
TRIO-211ENST00000508343 DNAJB12Q9NXW2 375 aaKnown RBP13.5□□□□□ -0.25
TRIO-211ENST00000508343 VAPAQ9P0L0 249 aa13.5□□□□□ -0.25
TRIO-211ENST00000508343 ZNF232Q9UNY5 417 aa13.5□□□□□ -0.25
TRIO-211ENST00000508343 CSMD1Q96PZ7 3565 aa13.5□□□□□ -0.25
TRIO-211ENST00000508343 EVPLLA8MZ36 301 aa13.49□□□□□ -0.25
TRIO-211ENST00000508343 MSTNO14793 375 aa13.49□□□□□ -0.25
TRIO-211ENST00000508343 ANGPT2O15123 496 aa13.49□□□□□ -0.25
TRIO-211ENST00000508343 PABPC4LP0CB38 370 aaKnown RBP13.49□□□□□ -0.25
TRIO-211ENST00000508343 MDH1P40925 334 aaKnown RBP13.49□□□□□ -0.25
TRIO-211ENST00000508343 APOBEC1P41238 236 aaKnown RBP13.49□□□□□ -0.25
TRIO-211ENST00000508343 KIR2DL3P43628 341 aa13.49□□□□□ -0.25
TRIO-211ENST00000508343 IDH2P48735 452 aaKnown RBP13.49□□□□□ -0.25
TRIO-211ENST00000508343 SIRPAP78324 504 aa13.49□□□□□ -0.25
TRIO-211ENST00000508343 TLE4Q04727 773 aa13.49□□□□□ -0.25
TRIO-211ENST00000508343 SNTB1Q13884 538 aaKnown RBP13.49□□□□□ -0.25
TRIO-211ENST00000508343 GUSBP1Q15486 140 aa13.49□□□□□ -0.25
TRIO-211ENST00000508343 ZSWIM7Q19AV6 140 aa13.49□□□□□ -0.25
TRIO-211ENST00000508343 LIN52Q52LA3 116 aa13.49□□□□□ -0.25
TRIO-211ENST00000508343 MRPL2Q5T653 305 aaKnown RBP13.49□□□□□ -0.25
TRIO-211ENST00000508343 GTF2IRD2BQ6EKJ0 949 aa13.49□□□□□ -0.25
TRIO-211ENST00000508343 CGB2Q6NT52 195 aa13.49□□□□□ -0.25
TRIO-211ENST00000508343 VWA1Q6PCB0 445 aa13.49□□□□□ -0.25
TRIO-211ENST00000508343 DLEU7Q6UYE1 221 aa13.49□□□□□ -0.25
TRIO-211ENST00000508343 FAM214BQ7L5A3 538 aa13.49□□□□□ -0.25
TRIO-211ENST00000508343 BTLAQ7Z6A9 289 aa13.49□□□□□ -0.25
TRIO-211ENST00000508343 GTF2IRD2Q86UP8 949 aa13.49□□□□□ -0.25
TRIO-211ENST00000508343 VRK2Q86Y07 508 aa13.49□□□□□ -0.25
TRIO-211ENST00000508343 DPP10Q8N608 796 aa13.49□□□□□ -0.25
TRIO-211ENST00000508343 MAL2Q969L2 176 aa13.49□□□□□ -0.25
TRIO-211ENST00000508343 CPNE4Q96A23 557 aaPredicted RBP13.49□□□□□ -0.25
TRIO-211ENST00000508343 GMPPAQ96IJ6 420 aaPredicted RBP13.49□□□□□ -0.25
TRIO-211ENST00000508343 ZNF559Q9BR84 538 aa13.49□□□□□ -0.25
TRIO-211ENST00000508343 MCCC2Q9HCC0 563 aa13.49□□□□□ -0.25
TRIO-211ENST00000508343 BCL2L10Q9HD36 194 aa13.49□□□□□ -0.25
TRIO-211ENST00000508343 GLRX2Q9NS18 164 aa13.49□□□□□ -0.25
TRIO-211ENST00000508343 MRGBPQ9NV56 204 aa13.49□□□□□ -0.25
TRIO-211ENST00000508343 PRDM4Q9UKN5 801 aa13.49□□□□□ -0.25
TRIO-211ENST00000508343 CORO2BQ9UQ03 480 aa13.49□□□□□ -0.25
TRIO-211ENST00000508343 FBN2P35556 2912 aa13.49□□□□□ -0.25
TRIO-211ENST00000508343 LRBAP50851 2863 aa13.49□□□□□ -0.25
TRIO-211ENST00000508343 TACC2O95359 2948 aa13.48□□□□□ -0.25
TRIO-211ENST00000508343 CDHR4A6H8M9 788 aa13.48□□□□□ -0.25
TRIO-211ENST00000508343 CFAP73A6NFT4 308 aa13.48□□□□□ -0.25
TRIO-211ENST00000508343 C5orf58C9J3I9 102 aa13.48□□□□□ -0.25
TRIO-211ENST00000508343 FAAHO00519 579 aa13.48□□□□□ -0.25
TRIO-211ENST00000508343 ADAM11O75078 769 aa13.48□□□□□ -0.25
TRIO-211ENST00000508343 SMNDC1O75940 238 aaKnown RBP eCLIP13.48□□□□□ -0.25
TRIO-211ENST00000508343 PLGP00747 810 aaPredicted RBP13.48□□□□□ -0.25
TRIO-211ENST00000508343 CGAP01215 116 aa13.48□□□□□ -0.25
TRIO-211ENST00000508343 THBS1P07996 1170 aa13.48□□□□□ -0.25
TRIO-211ENST00000508343 GPX2P18283 190 aa13.48□□□□□ -0.25
TRIO-211ENST00000508343 FKBP2P26885 142 aaKnown RBP13.48□□□□□ -0.25
TRIO-211ENST00000508343 SLC7A1P30825 629 aa13.48□□□□□ -0.25
TRIO-211ENST00000508343 HTR3AP46098 478 aa13.48□□□□□ -0.25
TRIO-211ENST00000508343 CPA2P48052 419 aa13.48□□□□□ -0.25
TRIO-211ENST00000508343 SORDQ00796 357 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms