RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 MRGPRX3Q96LB0 322 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 COQ10AQ96MF6 247 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 NEDD4LQ96PU5 975 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 FUCA2Q9BTY2 467 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 GON7Q9BXV9 100 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 FKRPQ9H9S5 495 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 LIN28AQ9H9Z2 209 aaKnown RBP2.75□□□□□ -1.97
NEDD4-208ENST00000508342 FOLH1BQ9HBA9 442 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 MOV10Q9HCE1 1003 aaKnown RBP2.75□□□□□ -1.97
NEDD4-208ENST00000508342 SIX2Q9NPC8 291 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 OBP2BQ9NPH6 170 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 SDHAF2Q9NX18 166 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 IL37Q9NZH6 218 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 TMEM59LQ9UK28 342 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 TBC1D24Q9ULP9 559 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 ZDHHC9Q9Y397 364 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 SPG11Q96JI7 2443 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 MYO7BQ6PIF6 2116 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 SLC1A7O00341 560 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 DVL2O14641 736 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 TOX3O15405 576 aaPredicted RBP2.75□□□□□ -1.97
NEDD4-208ENST00000508342 GBAP04062 536 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 MMP2P08253 660 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 CELA3AP09093 270 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 GSTP1P09211 210 aaKnown RBP2.75□□□□□ -1.97
NEDD4-208ENST00000508342 H2BFMP0C1H6 154 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 PORP16435 677 aaPredicted RBP2.75□□□□□ -1.97
NEDD4-208ENST00000508342 PRKACAP17612 351 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 BMP6P22004 513 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 PCMT1P22061 227 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 GNRHRP30968 328 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 GIPRP48546 466 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 PGFP49763 221 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 CARD18P57730 90 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 CORO7P57737 925 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 HTD2P86397 168 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 DPTQ07507 201 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 PTPRRQ15256 657 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 ZXDCQ2QGD7 858 aaPredicted RBP2.75□□□□□ -1.97
NEDD4-208ENST00000508342 TIGD2Q4W5G0 525 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 JMJD6Q6NYC1 403 aaPredicted RBP2.75□□□□□ -1.97
NEDD4-208ENST00000508342 PET117Q6UWS5 81 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 SLC51BQ86UW2 128 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 TPRA1Q86W33 373 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 ZNF615Q8N8J6 731 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 OR2T12Q8NG77 320 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 OR51L1Q8NGJ5 315 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 COQ8AQ8NI60 647 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 M1APQ8TC57 530 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 ASB12Q8WXK4 309 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 C16orf58Q96GQ5 468 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 APOPT1Q96IL0 206 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 HBEGFQ99075 208 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 NEU1Q99519 415 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 PKMYT1Q99640 499 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 CD244Q9BZW8 370 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 OR6C2Q9NZP2 312 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 ZNF223Q9UK11 482 aaPredicted RBP2.75□□□□□ -1.97
NEDD4-208ENST00000508342 RAB21Q9UL25 225 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 MYOFQ9NZM1 2061 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 A0A1B0GWJ7 208 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 ANKRD30BLA7E2S9 258 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 MAGEB17A8MXT2 336 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 ADAMDEC1O15204 470 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 ENSAO43768 121 aaKnown RBP2.75□□□□□ -1.97
NEDD4-208ENST00000508342 FADS2O95864 444 aaKnown RBP2.75□□□□□ -1.97
NEDD4-208ENST00000508342 S1PR1P21453 382 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 TRHRP34981 398 aaPredicted RBP2.75□□□□□ -1.97
NEDD4-208ENST00000508342 NUDT6P53370 316 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 TMBIM6P55061 237 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 HERVK_113P63132 956 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 ERVK-8P63133 956 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 DPY19L1Q2PZI1 675 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 PLEKHN1Q494U1 663 aaPredicted RBP2.75□□□□□ -1.97
NEDD4-208ENST00000508342 PYDC2Q56P42 97 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 FIGNQ5HY92 759 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 HENMT1Q5T8I9 393 aaKnown RBP2.75□□□□□ -1.97
NEDD4-208ENST00000508342 BBS12Q6ZW61 710 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 REC114Q7Z4M0 266 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 GOLGA7Q7Z5G4 137 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 ARHGAP22Q7Z5H3 698 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 GALNT12Q8IXK2 581 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 SLC15A3Q8IY34 581 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 YIPF7Q8N8F6 280 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 DDHD1Q8NEL9 900 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 OR1J2Q8NGS2 313 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 FBXO27Q8NI29 283 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 SPTSSAQ969W0 71 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 PERPQ96FX8 193 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 CDK15Q96Q40 435 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 ZNF184Q99676 751 aaPredicted RBP2.75□□□□□ -1.97
NEDD4-208ENST00000508342 SSX3Q99909 188 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 MACROD1Q9BQ69 325 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 PIMREGQ9BSJ6 248 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 ERVK-6Q9BXR3 956 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 NELFAQ9H3P2 528 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 PAK1IP1Q9NWT1 392 aaPredicted RBP2.75□□□□□ -1.97
NEDD4-208ENST00000508342 C1orf109Q9NX04 203 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 ABCD2Q9UBJ2 740 aa2.75□□□□□ -1.97
NEDD4-208ENST00000508342 STOML2Q9UJZ1 356 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms