RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 HINT3Q9NQE9 182 aaKnown RBP4.61□□□□□ -1.67
HMGB3P16-201ENST00000508037 NANSQ9NR45 359 aa4.61□□□□□ -1.67
HMGB3P16-201ENST00000508037 SPHK2Q9NRA0 654 aa4.61□□□□□ -1.67
HMGB3P16-201ENST00000508037 CTPS2Q9NRF8 586 aa4.61□□□□□ -1.67
HMGB3P16-201ENST00000508037 POLE3Q9NRF9 147 aa4.61□□□□□ -1.67
HMGB3P16-201ENST00000508037 CMC2Q9NRP2 79 aa4.61□□□□□ -1.67
HMGB3P16-201ENST00000508037 SEMA4GQ9NTN9 838 aa4.61□□□□□ -1.67
HMGB3P16-201ENST00000508037 SLCO1C1Q9NYB5 712 aa4.61□□□□□ -1.67
HMGB3P16-201ENST00000508037 TAS2R8Q9NYW2 309 aa4.61□□□□□ -1.67
HMGB3P16-201ENST00000508037 MED11Q9P086 117 aa4.61□□□□□ -1.67
HMGB3P16-201ENST00000508037 HCN3Q9P1Z3 774 aa4.61□□□□□ -1.67
HMGB3P16-201ENST00000508037 KLHL9Q9P2J3 617 aa4.61□□□□□ -1.67
HMGB3P16-201ENST00000508037 RGS17Q9UGC6 210 aaPredicted RBP4.61□□□□□ -1.67
HMGB3P16-201ENST00000508037 CYB5R1Q9UHQ9 305 aa4.61□□□□□ -1.67
HMGB3P16-201ENST00000508037 ZNF443Q9Y2A4 671 aaPredicted RBP4.61□□□□□ -1.67
HMGB3P16-201ENST00000508037 SLC35A3Q9Y2D2 325 aa4.61□□□□□ -1.67
HMGB3P16-201ENST00000508037 PCM1Q15154 2024 aa4.61□□□□□ -1.67
HMGB3P16-201ENST00000508037 KIF26AQ9ULI4 1882 aaPredicted RBP4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 ANAPC1Q9H1A4 1944 aa4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 TBC1D3EA0A087X179 549 aa4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 LOC105369274A0A096LPK9 316 aa4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 A0A0G2JK05 382 aa4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 EDDM13A0A1B0GTR0 161 aa4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 SHISA3A0PJX4 238 aa4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 CDHR4A6H8M9 788 aa4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 LRIT2A6NDA9 550 aa4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 OR6C65A6NJZ3 312 aa4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 HMSDA8MTL9 139 aa4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 C9orf172C9J069 976 aa4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 H7BY64 318 aa4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 J3QLW9 94 aa4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 ACOT7O00154 380 aa4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 SOCS6O14544 535 aa4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 OGG1O15527 345 aa4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 LANCL1O43813 399 aa4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 KHDRBS3O75525 346 aaKnown RBP4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 MTRF1O75570 445 aaKnown RBP4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 ERAL1O75616 437 aaKnown RBP4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 RP2O75695 350 aa4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 KRT33AO76009 404 aa4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 EPPINO95925 133 aa4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 CH25HO95992 272 aa4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 CXCL10P02778 98 aa4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 MT-ND4P03905 459 aa4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 ATP1B1P05026 303 aa4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 DBIP07108 87 aaKnown RBP4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 HOXD4P09016 255 aaPredicted RBP4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 CD3GP09693 182 aa4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 IFI6P09912 130 aa4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 UCHL1P09936 223 aa4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 SBK2P0C263 348 aa4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 OR2T7P0C7T2 308 aa4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 ELNP15502 786 aa4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 PPP3CBP16298 524 aa4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 ZNF19P17023 458 aa4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 SYN1P17600 705 aa4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 CXCL3P19876 107 aa4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 ZNF10P21506 573 aaPredicted RBP4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 NT5EP21589 574 aa4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 HIST1H1TP22492 207 aaPredicted RBP4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 NFYAP23511 347 aaPredicted RBP4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 CTGFP29279 349 aa4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 CALCRP30988 508 aa4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 SLC6A6P31641 620 aa4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 BMP8BP34820 402 aa4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 GDNFP39905 211 aa4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 MNDAP41218 407 aa4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 GPR4P46093 362 aa4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 SLC16A1P53985 500 aa4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 DLX5P56178 289 aa4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 SCAND1P57086 179 aa4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 CSNK1G2P78368 415 aa4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 POU6F2P78424 691 aaPredicted RBP4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 DGCR2P98153 550 aa4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 PRDX1Q06830 199 aaKnown RBP4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 SLC3A1Q07837 685 aa4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 STX4Q12846 297 aa4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 DUSP8Q13202 625 aa4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 CEBPEQ15744 281 aa4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 MPPED2Q15777 294 aa4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 ZIC1Q15915 447 aa4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 NDUFAF6Q330K2 333 aa4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 ARHGAP11BQ3KRB8 267 aa4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 NHLRC3Q5JS37 347 aa4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 PIP5KL1Q5T9C9 394 aa4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 OLFML2AQ68BL7 652 aa4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 DMKNQ6E0U4 476 aaPredicted RBP4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 HEPHL1Q6MZM0 1159 aa4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 RPL22L1Q6P5R6 122 aaKnown RBP4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 LRRN1Q6UXK5 716 aa4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 TMPRSS11FQ6ZWK6 438 aa4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 MTSS1LQ765P7 747 aa4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 PARS2Q7L3T8 475 aaKnown RBP4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 NLRC3Q7RTR2 1065 aa4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 HSD17B13Q7Z5P4 300 aaPredicted RBP4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 BMP8AQ7Z5Y6 402 aa4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 UBE3DQ7Z6J8 389 aa4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 COMTD1Q86VU5 262 aa4.6□□□□□ -1.67
HMGB3P16-201ENST00000508037 VRK2Q86Y07 508 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 125.5 ms