RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 OBSL1O75147 1896 aa15.85■□□□□ 0.13
SQSTM1-211ENST00000506690 SLC22A31A6NKX4 558 aa15.85■□□□□ 0.13
SQSTM1-211ENST00000506690 FAM74A7A6NL05 159 aa15.85■□□□□ 0.13
SQSTM1-211ENST00000506690 WASH3PC4AMC7 463 aa15.85■□□□□ 0.13
SQSTM1-211ENST00000506690 SERPINA3P01011 423 aa15.85■□□□□ 0.13
SQSTM1-211ENST00000506690 MAOBP27338 520 aa15.85■□□□□ 0.13
SQSTM1-211ENST00000506690 PTGER1P34995 402 aa15.85■□□□□ 0.13
SQSTM1-211ENST00000506690 ARFIP1P53367 373 aa15.85■□□□□ 0.13
SQSTM1-211ENST00000506690 LINC00303Q3SY05 128 aa15.85■□□□□ 0.13
SQSTM1-211ENST00000506690 FAM74A3Q4VXF1 159 aa15.85■□□□□ 0.13
SQSTM1-211ENST00000506690 TPGS2Q68CL5 300 aa15.85■□□□□ 0.13
SQSTM1-211ENST00000506690 HTR3DQ70Z44 454 aa15.85■□□□□ 0.13
SQSTM1-211ENST00000506690 UBE3DQ7Z6J8 389 aa15.85■□□□□ 0.13
SQSTM1-211ENST00000506690 ZNF671Q8TAW3 534 aa15.85■□□□□ 0.13
SQSTM1-211ENST00000506690 SFXN5Q8TD22 340 aa15.85■□□□□ 0.13
SQSTM1-211ENST00000506690 GANCQ8TET4 914 aa15.85■□□□□ 0.13
SQSTM1-211ENST00000506690 ZDHHC1Q8WTX9 485 aa15.85■□□□□ 0.13
SQSTM1-211ENST00000506690 C16orf58Q96GQ5 468 aa15.85■□□□□ 0.13
SQSTM1-211ENST00000506690 USB1Q9BQ65 265 aaKnown RBP15.85■□□□□ 0.13
SQSTM1-211ENST00000506690 CFHR5Q9BXR6 569 aa15.85■□□□□ 0.13
SQSTM1-211ENST00000506690 ELAC1Q9H777 363 aaKnown RBP15.85■□□□□ 0.13
SQSTM1-211ENST00000506690 KLHL9Q9P2J3 617 aa15.85■□□□□ 0.13
SQSTM1-211ENST00000506690 KIAA1549LQ6ZVL6 1849 aa15.85■□□□□ 0.13
SQSTM1-211ENST00000506690 ANTXRLA6NF34 631 aa15.85■□□□□ 0.13
SQSTM1-211ENST00000506690 ARL6IP5O75915 188 aa15.85■□□□□ 0.13
SQSTM1-211ENST00000506690 AQP8O94778 261 aa15.85■□□□□ 0.13
SQSTM1-211ENST00000506690 OR5F1O95221 314 aa15.85■□□□□ 0.13
SQSTM1-211ENST00000506690 SBK2P0C263 348 aa15.85■□□□□ 0.13
SQSTM1-211ENST00000506690 CAPZA2P47755 286 aa15.85■□□□□ 0.13
SQSTM1-211ENST00000506690 HOXA1P49639 335 aaPredicted RBP15.85■□□□□ 0.13
SQSTM1-211ENST00000506690 PDSS1Q5T2R2 415 aa15.85■□□□□ 0.13
SQSTM1-211ENST00000506690 FAM199XQ6PEV8 388 aaPredicted RBP15.85■□□□□ 0.13
SQSTM1-211ENST00000506690 OVCH1Q7RTY7 1134 aa15.85■□□□□ 0.13
SQSTM1-211ENST00000506690 CMTM8Q8IZV2 173 aa15.85■□□□□ 0.13
SQSTM1-211ENST00000506690 ENKD1Q9H0I2 346 aa15.85■□□□□ 0.13
SQSTM1-211ENST00000506690 ADGRL4Q9HBW9 690 aa15.85■□□□□ 0.13
SQSTM1-211ENST00000506690 ZNF334Q9HCZ1 680 aaPredicted RBP15.85■□□□□ 0.13
SQSTM1-211ENST00000506690 SLC6A20Q9NP91 592 aa15.85■□□□□ 0.13
SQSTM1-211ENST00000506690 KLK11Q9UBX7 282 aa15.85■□□□□ 0.13
SQSTM1-211ENST00000506690 SLC25A13Q9UJS0 675 aa15.85■□□□□ 0.13
SQSTM1-211ENST00000506690 ADAM29Q9UKF5 820 aa15.85■□□□□ 0.13
SQSTM1-211ENST00000506690 AK6Q9Y3D8 172 aaKnown RBP15.85■□□□□ 0.13
SQSTM1-211ENST00000506690 HTTP42858 3142 aa15.84■□□□□ 0.13
SQSTM1-211ENST00000506690 ANKRD20A5PA0PJZ0 165 aa15.84■□□□□ 0.13
SQSTM1-211ENST00000506690 SIGLEC6O43699 453 aa15.84■□□□□ 0.13
SQSTM1-211ENST00000506690 KCNJ13O60928 360 aa15.84■□□□□ 0.13
SQSTM1-211ENST00000506690 KRT33AO76009 404 aa15.84■□□□□ 0.13
SQSTM1-211ENST00000506690 PCDH8O95206 1070 aa15.84■□□□□ 0.13
SQSTM1-211ENST00000506690 MRPL3P09001 348 aaKnown RBP15.84■□□□□ 0.13
SQSTM1-211ENST00000506690 UCHL1P09936 223 aa15.84■□□□□ 0.13
SQSTM1-211ENST00000506690 TIMP2P16035 220 aa15.84■□□□□ 0.13
SQSTM1-211ENST00000506690 ACADLP28330 430 aa15.84■□□□□ 0.13
SQSTM1-211ENST00000506690 PYCR1P32322 319 aa15.84■□□□□ 0.13
SQSTM1-211ENST00000506690 RGS8P57771 180 aaPredicted RBP15.84■□□□□ 0.13
SQSTM1-211ENST00000506690 MAT1AQ00266 395 aaKnown RBP15.84■□□□□ 0.13
SQSTM1-211ENST00000506690 PAQR7Q86WK9 346 aa15.84■□□□□ 0.13
SQSTM1-211ENST00000506690 LRRC46Q96FV0 321 aa15.84■□□□□ 0.13
SQSTM1-211ENST00000506690 MCHR1Q99705 422 aa15.84■□□□□ 0.13
SQSTM1-211ENST00000506690 AIF1LQ9BQI0 150 aa15.84■□□□□ 0.13
SQSTM1-211ENST00000506690 MRPL17Q9NRX2 175 aaKnown RBP15.84■□□□□ 0.13
SQSTM1-211ENST00000506690 CREBZFQ9NS37 354 aa15.84■□□□□ 0.13
SQSTM1-211ENST00000506690 PRKAB1Q9Y478 270 aa15.84■□□□□ 0.13
SQSTM1-211ENST00000506690 CHURC1-FNTBB4DL54 471 aa15.84■□□□□ 0.13
SQSTM1-211ENST00000506690 NDUFS4O43181 175 aa15.84■□□□□ 0.13
SQSTM1-211ENST00000506690 KDM4BO94953 1096 aa15.84■□□□□ 0.13
SQSTM1-211ENST00000506690 H2AFB1P0C5Y9 115 aa15.84■□□□□ 0.13
SQSTM1-211ENST00000506690 IL9P15248 144 aa15.84■□□□□ 0.13
SQSTM1-211ENST00000506690 PRKAR1BP31321 381 aa15.84■□□□□ 0.13
SQSTM1-211ENST00000506690 TGM3Q08188 693 aa15.84■□□□□ 0.13
SQSTM1-211ENST00000506690 IL10RAQ13651 578 aa15.84■□□□□ 0.13
SQSTM1-211ENST00000506690 TRMT11Q7Z4G4 463 aaKnown RBP15.84■□□□□ 0.13
SQSTM1-211ENST00000506690 UBE2Q1Q7Z7E8 422 aa15.84■□□□□ 0.13
SQSTM1-211ENST00000506690 LRRTM4Q86VH4 590 aa15.84■□□□□ 0.13
SQSTM1-211ENST00000506690 C17orf64Q86WR6 236 aa15.84■□□□□ 0.13
SQSTM1-211ENST00000506690 PM20D2Q8IYS1 436 aa15.84■□□□□ 0.13
SQSTM1-211ENST00000506690 LNX2Q8N448 690 aa15.84■□□□□ 0.13
SQSTM1-211ENST00000506690 HMGB4Q8WW32 186 aa15.84■□□□□ 0.13
SQSTM1-211ENST00000506690 SMAD5Q99717 465 aaKnown RBP15.84■□□□□ 0.13
SQSTM1-211ENST00000506690 UQCC2Q9BRT2 126 aa15.84■□□□□ 0.13
SQSTM1-211ENST00000506690 PURGQ9UJV8 347 aaKnown RBP15.84■□□□□ 0.13
SQSTM1-211ENST00000506690 PLAGL1Q9UM63 463 aa15.84■□□□□ 0.13
SQSTM1-211ENST00000506690 KCNK7Q9Y2U2 307 aa15.84■□□□□ 0.13
SQSTM1-211ENST00000506690 UNC119BA6NIH7 251 aa15.83■□□□□ 0.12
SQSTM1-211ENST00000506690 NEDD8-MDP1E9PL57 170 aa15.83■□□□□ 0.12
SQSTM1-211ENST00000506690 GRM6O15303 877 aa15.83■□□□□ 0.12
SQSTM1-211ENST00000506690 NDUFB6O95139 128 aa15.83■□□□□ 0.12
SQSTM1-211ENST00000506690 EFEMP2O95967 443 aa15.83■□□□□ 0.12
SQSTM1-211ENST00000506690 DLX5P56178 289 aa15.83■□□□□ 0.12
SQSTM1-211ENST00000506690 H2BFSP57053 126 aa15.83■□□□□ 0.12
SQSTM1-211ENST00000506690 TRA2BP62995 288 aaKnown RBP15.83■□□□□ 0.12
SQSTM1-211ENST00000506690 ZNF805Q5CZA5 627 aa15.83■□□□□ 0.12
SQSTM1-211ENST00000506690 NUDT18Q6ZVK8 323 aa15.83■□□□□ 0.12
SQSTM1-211ENST00000506690 FANK1Q8TC84 345 aa15.83■□□□□ 0.12
SQSTM1-211ENST00000506690 DERL3Q96Q80 235 aa15.83■□□□□ 0.12
SQSTM1-211ENST00000506690 OR1F2PQ96R84 312 aa15.83■□□□□ 0.12
SQSTM1-211ENST00000506690 OR7D2Q96RA2 312 aa15.83■□□□□ 0.12
SQSTM1-211ENST00000506690 ZDHHC5Q9C0B5 715 aa15.83■□□□□ 0.12
SQSTM1-211ENST00000506690 PELI2Q9HAT8 420 aa15.83■□□□□ 0.12
SQSTM1-211ENST00000506690 KLHL28Q9NXS3 571 aa15.83■□□□□ 0.12
SQSTM1-211ENST00000506690 MYO10Q9HD67 2058 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms