RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 SESN3P58005 492 aa10.76□□□□□ -0.69
PDLIM5-208ENST00000504489 EPS8Q12929 822 aa10.76□□□□□ -0.69
PDLIM5-208ENST00000504489 BCL2A1Q16548 175 aa10.76□□□□□ -0.69
PDLIM5-208ENST00000504489 DUSP7Q16829 419 aa10.76□□□□□ -0.69
PDLIM5-208ENST00000504489 EIF2S3LQ2VIR3 472 aaKnown RBP10.76□□□□□ -0.69
PDLIM5-208ENST00000504489 GXYLT1Q4G148 440 aa10.76□□□□□ -0.69
PDLIM5-208ENST00000504489 EMC4Q5J8M3 183 aa10.76□□□□□ -0.69
PDLIM5-208ENST00000504489 WLSQ5T9L3 541 aa10.76□□□□□ -0.69
PDLIM5-208ENST00000504489 ENPP6Q6UWR7 440 aa10.76□□□□□ -0.69
PDLIM5-208ENST00000504489 C6orf89Q6UWU4 347 aa10.76□□□□□ -0.69
PDLIM5-208ENST00000504489 DOLPP1Q86YN1 238 aa10.76□□□□□ -0.69
PDLIM5-208ENST00000504489 ARHGAP24Q8N264 748 aa10.76□□□□□ -0.69
PDLIM5-208ENST00000504489 POC1BQ8TC44 478 aa10.76□□□□□ -0.69
PDLIM5-208ENST00000504489 SLC26A7Q8TE54 656 aa10.76□□□□□ -0.69
PDLIM5-208ENST00000504489 PRDM14Q9GZV8 571 aa10.76□□□□□ -0.69
PDLIM5-208ENST00000504489 ACER3Q9NUN7 267 aa10.76□□□□□ -0.69
PDLIM5-208ENST00000504489 TAS2R1Q9NYW7 299 aa10.76□□□□□ -0.69
PDLIM5-208ENST00000504489 STOML1Q9UBI4 398 aa10.76□□□□□ -0.69
PDLIM5-208ENST00000504489 OSGIN2Q9Y236 505 aa10.76□□□□□ -0.69
PDLIM5-208ENST00000504489 ZNF337Q9Y3M9 751 aa10.76□□□□□ -0.69
PDLIM5-208ENST00000504489 AP4B1Q9Y6B7 739 aa10.76□□□□□ -0.69
PDLIM5-208ENST00000504489 FASNP49327 2511 aaKnown RBP10.76□□□□□ -0.69
PDLIM5-208ENST00000504489 HELZ2Q9BYK8 2649 aaKnown RBP10.75□□□□□ -0.69
PDLIM5-208ENST00000504489 SHISA8B8ZZ34 492 aa10.75□□□□□ -0.69
PDLIM5-208ENST00000504489 CXCR6O00574 342 aa10.75□□□□□ -0.69
PDLIM5-208ENST00000504489 AP3D1O14617 1153 aa10.75□□□□□ -0.69
PDLIM5-208ENST00000504489 GSTA4O15217 222 aa10.75□□□□□ -0.69
PDLIM5-208ENST00000504489 WISP1O95388 367 aa10.75□□□□□ -0.69
PDLIM5-208ENST00000504489 TPOP07202 933 aa10.75□□□□□ -0.69
PDLIM5-208ENST00000504489 GKN3PP0CG01 181 aa10.75□□□□□ -0.69
PDLIM5-208ENST00000504489 GP1BBP13224 206 aa10.75□□□□□ -0.69
PDLIM5-208ENST00000504489 ELK4P28324 431 aa10.75□□□□□ -0.69
PDLIM5-208ENST00000504489 RYKP34925 604 aa10.75□□□□□ -0.69
PDLIM5-208ENST00000504489 CA7P43166 264 aa10.75□□□□□ -0.69
PDLIM5-208ENST00000504489 CASP6P55212 293 aa10.75□□□□□ -0.69
PDLIM5-208ENST00000504489 CBX1P83916 185 aa10.75□□□□□ -0.69
PDLIM5-208ENST00000504489 BNIP1Q12981 228 aa10.75□□□□□ -0.69
PDLIM5-208ENST00000504489 FXNQ16595 210 aa10.75□□□□□ -0.69
PDLIM5-208ENST00000504489 GLIPR1L2Q4G1C9 344 aa10.75□□□□□ -0.69
PDLIM5-208ENST00000504489 DCST1Q5T197 706 aa10.75□□□□□ -0.69
PDLIM5-208ENST00000504489 CD163Q86VB7 1156 aa10.75□□□□□ -0.69
PDLIM5-208ENST00000504489 COMTD1Q86VU5 262 aa10.75□□□□□ -0.69
PDLIM5-208ENST00000504489 PM20D2Q8IYS1 436 aa10.75□□□□□ -0.69
PDLIM5-208ENST00000504489 SMYD1Q8NB12 490 aa10.75□□□□□ -0.69
PDLIM5-208ENST00000504489 GPR32P1Q8NGA4 272 aa10.75□□□□□ -0.69
PDLIM5-208ENST00000504489 OR5M1Q8NGP8 315 aa10.75□□□□□ -0.69
PDLIM5-208ENST00000504489 ZNF563Q8TA94 476 aa10.75□□□□□ -0.69
PDLIM5-208ENST00000504489 PRR7Q8TB68 274 aa10.75□□□□□ -0.69
PDLIM5-208ENST00000504489 WDYHV1Q96HA8 205 aa10.75□□□□□ -0.69
PDLIM5-208ENST00000504489 RNF145Q96MT1 663 aa10.75□□□□□ -0.69
PDLIM5-208ENST00000504489 NPAS1Q99742 590 aa10.75□□□□□ -0.69
PDLIM5-208ENST00000504489 PNPLA3Q9NST1 481 aa10.75□□□□□ -0.69
PDLIM5-208ENST00000504489 KLHL28Q9NXS3 571 aa10.75□□□□□ -0.69
PDLIM5-208ENST00000504489 TNFRSF10DQ9UBN6 386 aa10.75□□□□□ -0.69
PDLIM5-208ENST00000504489 SLC13A4Q9UKG4 626 aa10.75□□□□□ -0.69
PDLIM5-208ENST00000504489 UBR5O95071 2799 aaPredicted RBP10.75□□□□□ -0.69
PDLIM5-208ENST00000504489 HCFC1P51610 2035 aa10.74□□□□□ -0.69
PDLIM5-208ENST00000504489 A0A1B0GUH1 482 aa10.74□□□□□ -0.69
PDLIM5-208ENST00000504489 AHRRA9YTQ3 701 aa10.74□□□□□ -0.69
PDLIM5-208ENST00000504489 EFNA2O43921 213 aa10.74□□□□□ -0.69
PDLIM5-208ENST00000504489 WDR1O75083 606 aa10.74□□□□□ -0.69
PDLIM5-208ENST00000504489 OPN1SWP03999 348 aa10.74□□□□□ -0.69
PDLIM5-208ENST00000504489 FESP07332 822 aa10.74□□□□□ -0.69
PDLIM5-208ENST00000504489 HOXD4P09016 255 aaPredicted RBP10.74□□□□□ -0.69
PDLIM5-208ENST00000504489 PRG2P13727 222 aa10.74□□□□□ -0.69
PDLIM5-208ENST00000504489 GABRA1P14867 456 aa10.74□□□□□ -0.69
PDLIM5-208ENST00000504489 ZNF708P17019 499 aa10.74□□□□□ -0.69
PDLIM5-208ENST00000504489 GGT1P19440 569 aa10.74□□□□□ -0.69
PDLIM5-208ENST00000504489 SLC1A3P43003 542 aa10.74□□□□□ -0.69
PDLIM5-208ENST00000504489 IDH2P48735 452 aaKnown RBP10.74□□□□□ -0.69
PDLIM5-208ENST00000504489 STARP49675 285 aa10.74□□□□□ -0.69
PDLIM5-208ENST00000504489 ZNF136P52737 540 aa10.74□□□□□ -0.69
PDLIM5-208ENST00000504489 CLDN18P56856 261 aa10.74□□□□□ -0.69
PDLIM5-208ENST00000504489 RAC1P63000 192 aa10.74□□□□□ -0.69
PDLIM5-208ENST00000504489 FOXF1Q12946 379 aa10.74□□□□□ -0.69
PDLIM5-208ENST00000504489 CEACAM7Q14002 265 aa10.74□□□□□ -0.69
PDLIM5-208ENST00000504489 SF3B4Q15427 424 aaKnown RBP eCLIP10.74□□□□□ -0.69
PDLIM5-208ENST00000504489 C3AR1Q16581 482 aa10.74□□□□□ -0.69
PDLIM5-208ENST00000504489 NRF1Q16656 503 aa10.74□□□□□ -0.69
PDLIM5-208ENST00000504489 CYBRD1Q53TN4 286 aa10.74□□□□□ -0.69
PDLIM5-208ENST00000504489 PLEKHM3Q6ZWE6 761 aa10.74□□□□□ -0.69
PDLIM5-208ENST00000504489 GRINAQ7Z429 371 aa10.74□□□□□ -0.69
PDLIM5-208ENST00000504489 RNF148Q8N7C7 305 aa10.74□□□□□ -0.69
PDLIM5-208ENST00000504489 OR5M9Q8NGP3 310 aa10.74□□□□□ -0.69
PDLIM5-208ENST00000504489 FIG4Q92562 907 aa10.74□□□□□ -0.69
PDLIM5-208ENST00000504489 RELTQ969Z4 430 aa10.74□□□□□ -0.69
PDLIM5-208ENST00000504489 ARHGDIGQ99819 225 aa10.74□□□□□ -0.69
PDLIM5-208ENST00000504489 ADAM19Q9H013 955 aa10.74□□□□□ -0.69
PDLIM5-208ENST00000504489 TP63Q9H3D4 680 aaPredicted RBP10.74□□□□□ -0.69
PDLIM5-208ENST00000504489 PACSIN3Q9UKS6 424 aa10.74□□□□□ -0.69
PDLIM5-208ENST00000504489 BAG5Q9UL15 447 aa10.74□□□□□ -0.69
PDLIM5-208ENST00000504489 PRPF19Q9UMS4 504 aaKnown RBP10.74□□□□□ -0.69
PDLIM5-208ENST00000504489 FREM1Q5H8C1 2179 aa10.74□□□□□ -0.69
PDLIM5-208ENST00000504489 FLNCQ14315 2725 aa10.73□□□□□ -0.69
PDLIM5-208ENST00000504489 TRGV8A0A0C4DH27 118 aa10.73□□□□□ -0.69
PDLIM5-208ENST00000504489 FIGNL2A6NMB9 653 aa10.73□□□□□ -0.69
PDLIM5-208ENST00000504489 TMEM229AB2RXF0 380 aa10.73□□□□□ -0.69
PDLIM5-208ENST00000504489 H3BML4 177 aa10.73□□□□□ -0.69
PDLIM5-208ENST00000504489 PYCARD-AS1I3L0S3 204 aa10.73□□□□□ -0.69
PDLIM5-208ENST00000504489 FRS3O43559 492 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms