RNA–Protein interactions for RNA: ENST00000503464.1

TOPBP1-203, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-203ENST00000503464 TMCO5AQ8N6Q1 288 aa6.29□□□□□ -1.4
TOPBP1-203ENST00000503464 TOR1AIP2Q8NFQ8 470 aa6.29□□□□□ -1.4
TOPBP1-203ENST00000503464 SLC22A8Q8TCC7 542 aa6.29□□□□□ -1.4
TOPBP1-203ENST00000503464 BRIX1Q8TDN6 353 aaKnown RBP6.29□□□□□ -1.4
TOPBP1-203ENST00000503464 TMEM239Q8WW34 195 aa6.29□□□□□ -1.4
TOPBP1-203ENST00000503464 APH1BQ8WW43 257 aa6.29□□□□□ -1.4
TOPBP1-203ENST00000503464 TTC9Q92623 222 aa6.29□□□□□ -1.4
TOPBP1-203ENST00000503464 SLC38A4Q969I6 547 aa6.29□□□□□ -1.4
TOPBP1-203ENST00000503464 NACC2Q96BF6 587 aa6.29□□□□□ -1.4
TOPBP1-203ENST00000503464 HRASLS5Q96KN8 279 aa6.29□□□□□ -1.4
TOPBP1-203ENST00000503464 TBL1XR1Q9BZK7 514 aa6.29□□□□□ -1.4
TOPBP1-203ENST00000503464 UCK2Q9BZX2 261 aa6.29□□□□□ -1.4
TOPBP1-203ENST00000503464 TRIM2Q9C040 744 aa6.29□□□□□ -1.4
TOPBP1-203ENST00000503464 FAM117AQ9C073 453 aa6.29□□□□□ -1.4
TOPBP1-203ENST00000503464 ADAM19Q9H013 955 aa6.29□□□□□ -1.4
TOPBP1-203ENST00000503464 CDCP1Q9H5V8 836 aa6.29□□□□□ -1.4
TOPBP1-203ENST00000503464 ARMC7Q9H6L4 198 aa6.29□□□□□ -1.4
TOPBP1-203ENST00000503464 EGLN3Q9H6Z9 239 aa6.29□□□□□ -1.4
TOPBP1-203ENST00000503464 TMEM27Q9HBJ8 222 aa6.29□□□□□ -1.4
TOPBP1-203ENST00000503464 ATP13A2Q9NQ11 1180 aa6.29□□□□□ -1.4
TOPBP1-203ENST00000503464 CDV3Q9UKY7 258 aaKnown RBP6.29□□□□□ -1.4
TOPBP1-203ENST00000503464 WASF3Q9UPY6 502 aa6.29□□□□□ -1.4
TOPBP1-203ENST00000503464 CELSR3Q9NYQ7 3312 aa6.29□□□□□ -1.4
TOPBP1-203ENST00000503464 FREM3P0C091 2139 aa6.29□□□□□ -1.4
TOPBP1-203ENST00000503464 ASPMQ8IZT6 3477 aa6.29□□□□□ -1.4
TOPBP1-203ENST00000503464 KIAA1549Q9HCM3 1950 aa6.28□□□□□ -1.4
TOPBP1-203ENST00000503464 A0A087WUJ7 227 aa6.28□□□□□ -1.4
TOPBP1-203ENST00000503464 IGLV3-32A0A0A0MS00 114 aa6.28□□□□□ -1.4
TOPBP1-203ENST00000503464 A0A0G2JMM0 328 aa6.28□□□□□ -1.4
TOPBP1-203ENST00000503464 A0A1W2PPB8 328 aa6.28□□□□□ -1.4
TOPBP1-203ENST00000503464 A0A1W2PRS3 328 aa6.28□□□□□ -1.4
TOPBP1-203ENST00000503464 KIR3DP1A8MWS1 328 aa6.28□□□□□ -1.4
TOPBP1-203ENST00000503464 H3BNH8 94 aa6.28□□□□□ -1.4
TOPBP1-203ENST00000503464 GTPBP1O00178 669 aaKnown RBP6.28□□□□□ -1.4
TOPBP1-203ENST00000503464 ETV2O00321 342 aaPredicted RBP6.28□□□□□ -1.4
TOPBP1-203ENST00000503464 KPNA4O00629 521 aaPredicted RBP6.28□□□□□ -1.4
TOPBP1-203ENST00000503464 EIF4E2O60573 245 aaKnown RBP6.28□□□□□ -1.4
TOPBP1-203ENST00000503464 WBP4O75554 376 aaKnown RBP6.28□□□□□ -1.4
TOPBP1-203ENST00000503464 LINGO3P0C6S8 592 aa6.28□□□□□ -1.4
TOPBP1-203ENST00000503464 CCL3P10147 92 aa6.28□□□□□ -1.4
TOPBP1-203ENST00000503464 LIPCP11150 499 aa6.28□□□□□ -1.4
TOPBP1-203ENST00000503464 HPGDP15428 266 aa6.28□□□□□ -1.4
TOPBP1-203ENST00000503464 GABRB1P18505 474 aa6.28□□□□□ -1.4
TOPBP1-203ENST00000503464 CASP3P42574 277 aa6.28□□□□□ -1.4
TOPBP1-203ENST00000503464 RBM34P42696 430 aaKnown RBP6.28□□□□□ -1.4
TOPBP1-203ENST00000503464 SSR4P51571 173 aa6.28□□□□□ -1.4
TOPBP1-203ENST00000503464 CCR4P51679 360 aa6.28□□□□□ -1.4
TOPBP1-203ENST00000503464 CRISP1P54107 249 aa6.28□□□□□ -1.4
TOPBP1-203ENST00000503464 DLX5P56178 289 aa6.28□□□□□ -1.4
TOPBP1-203ENST00000503464 CTBP2P56545 445 aa6.28□□□□□ -1.4
TOPBP1-203ENST00000503464 FOXK1P85037 733 aa6.28□□□□□ -1.4
TOPBP1-203ENST00000503464 ALDH6A1Q02252 535 aaKnown RBP6.28□□□□□ -1.4
TOPBP1-203ENST00000503464 EGR4Q05215 589 aa6.28□□□□□ -1.4
TOPBP1-203ENST00000503464 PRKCDQ05655 676 aa6.28□□□□□ -1.4
TOPBP1-203ENST00000503464 TSPAN31Q12999 210 aa6.28□□□□□ -1.4
TOPBP1-203ENST00000503464 CLN3Q13286 438 aa6.28□□□□□ -1.4
TOPBP1-203ENST00000503464 IL18R1Q13478 541 aa6.28□□□□□ -1.4
TOPBP1-203ENST00000503464 APOFQ13790 326 aa6.28□□□□□ -1.4
TOPBP1-203ENST00000503464 PTGES3Q15185 160 aaKnown RBP6.28□□□□□ -1.4
TOPBP1-203ENST00000503464 QPRTQ15274 297 aa6.28□□□□□ -1.4
TOPBP1-203ENST00000503464 MEP1AQ16819 746 aa6.28□□□□□ -1.4
TOPBP1-203ENST00000503464 COL28A1Q2UY09 1125 aa6.28□□□□□ -1.4
TOPBP1-203ENST00000503464 DCAF10Q5QP82 559 aa6.28□□□□□ -1.4
TOPBP1-203ENST00000503464 SWT1Q5T5J6 900 aaKnown RBP6.28□□□□□ -1.4
TOPBP1-203ENST00000503464 PRAMEF20Q5VT98 475 aa6.28□□□□□ -1.4
TOPBP1-203ENST00000503464 SLX4IPQ5VYV7 408 aa6.28□□□□□ -1.4
TOPBP1-203ENST00000503464 DMRTA1Q5VZB9 504 aa6.28□□□□□ -1.4
TOPBP1-203ENST00000503464 TTC23Q5W5X9 447 aa6.28□□□□□ -1.4
TOPBP1-203ENST00000503464 C12orf73Q69YU5 71 aa6.28□□□□□ -1.4
TOPBP1-203ENST00000503464 WBP2NLQ6ICG8 309 aa6.28□□□□□ -1.4
TOPBP1-203ENST00000503464 OR5M10Q6IEU7 315 aa6.28□□□□□ -1.4
TOPBP1-203ENST00000503464 TMEM81Q6P7N7 255 aa6.28□□□□□ -1.4
TOPBP1-203ENST00000503464 ULK3Q6PHR2 472 aa6.28□□□□□ -1.4
TOPBP1-203ENST00000503464 IL20RBQ6UXL0 311 aa6.28□□□□□ -1.4
TOPBP1-203ENST00000503464 ZNF620Q6ZNG0 422 aa6.28□□□□□ -1.4
TOPBP1-203ENST00000503464 SLC46A3Q7Z3Q1 461 aa6.28□□□□□ -1.4
TOPBP1-203ENST00000503464 MDGA2Q7Z553 956 aa6.28□□□□□ -1.4
TOPBP1-203ENST00000503464 RAB43Q86YS6 212 aa6.28□□□□□ -1.4
TOPBP1-203ENST00000503464 CCDC103Q8IW40 242 aa6.28□□□□□ -1.4
TOPBP1-203ENST00000503464 ENTHD1Q8IYW4 607 aa6.28□□□□□ -1.4
TOPBP1-203ENST00000503464 C8orf59Q8N0T1 100 aaPredicted RBP6.28□□□□□ -1.4
TOPBP1-203ENST00000503464 BEST3Q8N1M1 668 aa6.28□□□□□ -1.4
TOPBP1-203ENST00000503464 LINC00471Q8N535 108 aa6.28□□□□□ -1.4
TOPBP1-203ENST00000503464 IQCF1Q8N6M8 205 aa6.28□□□□□ -1.4
TOPBP1-203ENST00000503464 IL22RA1Q8N6P7 574 aa6.28□□□□□ -1.4
TOPBP1-203ENST00000503464 SIRT6Q8N6T7 355 aa6.28□□□□□ -1.4
TOPBP1-203ENST00000503464 WDSUB1Q8N9V3 476 aa6.28□□□□□ -1.4
TOPBP1-203ENST00000503464 ZNF555Q8NEP9 628 aa6.28□□□□□ -1.4
TOPBP1-203ENST00000503464 OR13C2Q8NGS9 318 aa6.28□□□□□ -1.4
TOPBP1-203ENST00000503464 OR5W2Q8NH69 310 aa6.28□□□□□ -1.4
TOPBP1-203ENST00000503464 CNIH3Q8TBE1 160 aa6.28□□□□□ -1.4
TOPBP1-203ENST00000503464 PIGXQ8TBF5 258 aa6.28□□□□□ -1.4
TOPBP1-203ENST00000503464 GNPDA2Q8TDQ7 276 aa6.28□□□□□ -1.4
TOPBP1-203ENST00000503464 GPR119Q8TDV5 335 aa6.28□□□□□ -1.4
TOPBP1-203ENST00000503464 DUSP19Q8WTR2 217 aa6.28□□□□□ -1.4
TOPBP1-203ENST00000503464 SGCDQ92629 289 aa6.28□□□□□ -1.4
TOPBP1-203ENST00000503464 FGF11Q92914 225 aa6.28□□□□□ -1.4
TOPBP1-203ENST00000503464 TMCO6Q96DC7 493 aa6.28□□□□□ -1.4
TOPBP1-203ENST00000503464 FRMD6Q96NE9 622 aa6.28□□□□□ -1.4
TOPBP1-203ENST00000503464 DPH1Q9BZG8 443 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms