RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 LDAHQ9H6V9 325 aa12.31□□□□□ -0.44
CPNE1-227ENST00000498056 NPIPA1Q9UND3 350 aa12.31□□□□□ -0.44
CPNE1-227ENST00000498056 A0A087WZY1 265 aa12.3□□□□□ -0.44
CPNE1-227ENST00000498056 TCRBV3S1A0A5B6 114 aa12.3□□□□□ -0.44
CPNE1-227ENST00000498056 TTLL8A6PVC2 850 aa12.3□□□□□ -0.44
CPNE1-227ENST00000498056 H3BML4 177 aa12.3□□□□□ -0.44
CPNE1-227ENST00000498056 PTNP21246 168 aa12.3□□□□□ -0.44
CPNE1-227ENST00000498056 MST1P26927 711 aa12.3□□□□□ -0.44
CPNE1-227ENST00000498056 GCKP35557 465 aa12.3□□□□□ -0.44
CPNE1-227ENST00000498056 MERTKQ12866 999 aa12.3□□□□□ -0.44
CPNE1-227ENST00000498056 OR1Q1Q15612 314 aa12.3□□□□□ -0.44
CPNE1-227ENST00000498056 HYAL4Q2M3T9 481 aa12.3□□□□□ -0.44
CPNE1-227ENST00000498056 CMPK2Q5EBM0 449 aa12.3□□□□□ -0.44
CPNE1-227ENST00000498056 WBP2NLQ6ICG8 309 aa12.3□□□□□ -0.44
CPNE1-227ENST00000498056 CYP4Z1Q86W10 505 aa12.3□□□□□ -0.44
CPNE1-227ENST00000498056 ZDHHC21Q8IVQ6 265 aa12.3□□□□□ -0.44
CPNE1-227ENST00000498056 ST8SIA1Q92185 356 aa12.3□□□□□ -0.44
CPNE1-227ENST00000498056 SMPDL3BQ92485 455 aa12.3□□□□□ -0.44
CPNE1-227ENST00000498056 POP5Q969H6 163 aaKnown RBP12.3□□□□□ -0.44
CPNE1-227ENST00000498056 PRRC1Q96M27 445 aa12.3□□□□□ -0.44
CPNE1-227ENST00000498056 NPAS1Q99742 590 aa12.3□□□□□ -0.44
CPNE1-227ENST00000498056 TRIM2Q9C040 744 aa12.3□□□□□ -0.44
CPNE1-227ENST00000498056 AMBRA1Q9C0C7 1298 aa12.3□□□□□ -0.44
CPNE1-227ENST00000498056 MAGIXQ9H6Y5 334 aa12.3□□□□□ -0.44
CPNE1-227ENST00000498056 ZDHHC11Q9H8X9 412 aa12.3□□□□□ -0.44
CPNE1-227ENST00000498056 TMEM27Q9HBJ8 222 aa12.3□□□□□ -0.44
CPNE1-227ENST00000498056 QPCTLQ9NXS2 382 aa12.3□□□□□ -0.44
CPNE1-227ENST00000498056 SELENONQ9NZV5 590 aa12.3□□□□□ -0.44
CPNE1-227ENST00000498056 IGSF10Q6WRI0 2623 aa12.29□□□□□ -0.44
CPNE1-227ENST00000498056 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.29□□□□□ -0.44
CPNE1-227ENST00000498056 A0A1B0GWA3 101 aa12.29□□□□□ -0.44
CPNE1-227ENST00000498056 J3KTA2 159 aa12.29□□□□□ -0.44
CPNE1-227ENST00000498056 FAAHO00519 579 aa12.29□□□□□ -0.44
CPNE1-227ENST00000498056 FMO6PO60774 539 aa12.29□□□□□ -0.44
CPNE1-227ENST00000498056 DIRAS1O95057 198 aa12.29□□□□□ -0.44
CPNE1-227ENST00000498056 HPNP05981 417 aa12.29□□□□□ -0.44
CPNE1-227ENST00000498056 RAP2AP10114 183 aa12.29□□□□□ -0.44
CPNE1-227ENST00000498056 ZNF17P17021 662 aa12.29□□□□□ -0.44
CPNE1-227ENST00000498056 CCNA2P20248 432 aa12.29□□□□□ -0.44
CPNE1-227ENST00000498056 SESN3P58005 492 aa12.29□□□□□ -0.44
CPNE1-227ENST00000498056 ACTR3P61158 418 aa12.29□□□□□ -0.44
CPNE1-227ENST00000498056 SPIBQ01892 262 aa12.29□□□□□ -0.44
CPNE1-227ENST00000498056 ALG10BQ5I7T1 473 aa12.29□□□□□ -0.44
CPNE1-227ENST00000498056 GRINAQ7Z429 371 aa12.29□□□□□ -0.44
CPNE1-227ENST00000498056 ADAMTS16Q8TE57 1224 aa12.29□□□□□ -0.44
CPNE1-227ENST00000498056 CANT1Q8WVQ1 401 aa12.29□□□□□ -0.44
CPNE1-227ENST00000498056 NR4A3Q92570 626 aa12.29□□□□□ -0.44
CPNE1-227ENST00000498056 RELTQ969Z4 430 aa12.29□□□□□ -0.44
CPNE1-227ENST00000498056 ZNF524Q96C55 264 aa12.29□□□□□ -0.44
CPNE1-227ENST00000498056 SNRNP40Q96DI7 357 aaKnown RBP12.29□□□□□ -0.44
CPNE1-227ENST00000498056 PIGQQ9BRB3 760 aa12.29□□□□□ -0.44
CPNE1-227ENST00000498056 TMEM185BQ9H7F4 350 aa12.29□□□□□ -0.44
CPNE1-227ENST00000498056 RHCGQ9UBD6 479 aa12.29□□□□□ -0.44
CPNE1-227ENST00000498056 SLC7A7Q9UM01 511 aa12.29□□□□□ -0.44
CPNE1-227ENST00000498056 SLC6A5Q9Y345 797 aa12.29□□□□□ -0.44
CPNE1-227ENST00000498056 TRGV5A0A0B4J1U4 118 aa12.28□□□□□ -0.44
CPNE1-227ENST00000498056 OR2M5A3KFT3 312 aa12.28□□□□□ -0.44
CPNE1-227ENST00000498056 TRAPPC13A5PLN9 417 aa12.28□□□□□ -0.44
CPNE1-227ENST00000498056 ELOA3DA6NLF2 546 aaPredicted RBP12.28□□□□□ -0.44
CPNE1-227ENST00000498056 TPST2O60704 377 aa12.28□□□□□ -0.44
CPNE1-227ENST00000498056 WISP1O95388 367 aa12.28□□□□□ -0.44
CPNE1-227ENST00000498056 UMPSP11172 480 aa12.28□□□□□ -0.44
CPNE1-227ENST00000498056 PEPDP12955 493 aa12.28□□□□□ -0.44
CPNE1-227ENST00000498056 ITGA2P17301 1181 aa12.28□□□□□ -0.44
CPNE1-227ENST00000498056 ELK4P28324 431 aa12.28□□□□□ -0.44
CPNE1-227ENST00000498056 TACR3P29371 465 aa12.28□□□□□ -0.44
CPNE1-227ENST00000498056 IFNA8P32881 189 aa12.28□□□□□ -0.44
CPNE1-227ENST00000498056 EIF1P41567 113 aaKnown RBP12.28□□□□□ -0.44
CPNE1-227ENST00000498056 SLC1A3P43003 542 aa12.28□□□□□ -0.44
CPNE1-227ENST00000498056 POLR2HP52434 150 aaKnown RBP12.28□□□□□ -0.44
CPNE1-227ENST00000498056 FOXK1P85037 733 aa12.28□□□□□ -0.44
CPNE1-227ENST00000498056 HSF1Q00613 529 aa12.28□□□□□ -0.44
CPNE1-227ENST00000498056 SELENBP1Q13228 472 aa12.28□□□□□ -0.44
CPNE1-227ENST00000498056 SLC10A1Q14973 349 aa12.28□□□□□ -0.44
CPNE1-227ENST00000498056 ELOA3BQ3SY89 546 aa12.28□□□□□ -0.44
CPNE1-227ENST00000498056 C3orf33Q6P1S2 294 aa12.28□□□□□ -0.44
CPNE1-227ENST00000498056 TRILQ7L0X0 811 aa12.28□□□□□ -0.44
CPNE1-227ENST00000498056 TSPYL5Q86VY4 417 aaPredicted RBP12.28□□□□□ -0.44
CPNE1-227ENST00000498056 SIAH3Q8IW03 269 aa12.28□□□□□ -0.44
CPNE1-227ENST00000498056 OFCC1Q8IZS5 231 aa12.28□□□□□ -0.44
CPNE1-227ENST00000498056 GTPBP8Q8N3Z3 284 aaPredicted RBP12.28□□□□□ -0.44
CPNE1-227ENST00000498056 ATP6V1C2Q8NEY4 427 aa12.28□□□□□ -0.44
CPNE1-227ENST00000498056 ELOA3Q8NG57 546 aa12.28□□□□□ -0.44
CPNE1-227ENST00000498056 POC1BQ8TC44 478 aa12.28□□□□□ -0.44
CPNE1-227ENST00000498056 STMN2Q93045 179 aa12.28□□□□□ -0.44
CPNE1-227ENST00000498056 C3orf49Q96BT1 292 aa12.28□□□□□ -0.44
CPNE1-227ENST00000498056 SLC41A3Q96GZ6 507 aa12.28□□□□□ -0.44
CPNE1-227ENST00000498056 MRGPRX4Q96LA9 322 aa12.28□□□□□ -0.44
CPNE1-227ENST00000498056 ZNF300Q96RE9 604 aaPredicted RBP12.28□□□□□ -0.44
CPNE1-227ENST00000498056 DENND2DQ9H6A0 471 aaPredicted RBP12.28□□□□□ -0.44
CPNE1-227ENST00000498056 AGPAT4Q9NRZ5 378 aa12.28□□□□□ -0.44
CPNE1-227ENST00000498056 ACER3Q9NUN7 267 aa12.28□□□□□ -0.44
CPNE1-227ENST00000498056 NDUFAF4Q9P032 175 aa12.28□□□□□ -0.44
CPNE1-227ENST00000498056 FAM32AQ9Y421 112 aaKnown RBP12.28□□□□□ -0.44
CPNE1-227ENST00000498056 TESMINQ9Y4I5 508 aa12.28□□□□□ -0.44
CPNE1-227ENST00000498056 ENPP4Q9Y6X5 453 aa12.28□□□□□ -0.44
CPNE1-227ENST00000498056 TMED7-TICAM2A0A0A6YYA0 188 aa12.27□□□□□ -0.45
CPNE1-227ENST00000498056 A0A0B4J2E0 115 aa12.27□□□□□ -0.45
CPNE1-227ENST00000498056 A0A1B0GX12 115 aa12.27□□□□□ -0.45
CPNE1-227ENST00000498056 C7orf72A4D263 438 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms