RNA–Protein interactions for RNA: ENST00000497564.5

VPS26A-209, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-209ENST00000497564 PDGFAP04085 211 aa12.94□□□□□ -0.34
VPS26A-209ENST00000497564 PRKACGP22612 351 aa12.94□□□□□ -0.34
VPS26A-209ENST00000497564 PTGDSP41222 190 aa12.94□□□□□ -0.34
VPS26A-209ENST00000497564 RAD23AP54725 363 aa12.94□□□□□ -0.34
VPS26A-209ENST00000497564 RRADP55042 308 aa12.94□□□□□ -0.34
VPS26A-209ENST00000497564 C17orf67Q0P5P2 114 aa12.94□□□□□ -0.34
VPS26A-209ENST00000497564 SEC23BQ15437 767 aa12.94□□□□□ -0.34
VPS26A-209ENST00000497564 NDUFAF6Q330K2 333 aa12.94□□□□□ -0.34
VPS26A-209ENST00000497564 ACER2Q5QJU3 275 aa12.94□□□□□ -0.34
VPS26A-209ENST00000497564 PODNL1Q6PEZ8 512 aa12.94□□□□□ -0.34
VPS26A-209ENST00000497564 CBLN3Q6UW01 205 aa12.94□□□□□ -0.34
VPS26A-209ENST00000497564 GATSQ8NAP1 163 aa12.94□□□□□ -0.34
VPS26A-209ENST00000497564 OR10G3Q8NGC4 313 aa12.94□□□□□ -0.34
VPS26A-209ENST00000497564 C9orf43Q8TAL5 461 aaPredicted RBP12.94□□□□□ -0.34
VPS26A-209ENST00000497564 DNAJA4Q8WW22 397 aaPredicted RBP12.94□□□□□ -0.34
VPS26A-209ENST00000497564 ACOT11Q8WXI4 607 aaPredicted RBP12.94□□□□□ -0.34
VPS26A-209ENST00000497564 ARSGQ96EG1 525 aa12.94□□□□□ -0.34
VPS26A-209ENST00000497564 THOC3Q96J01 351 aaKnown RBP12.94□□□□□ -0.34
VPS26A-209ENST00000497564 MPP4Q96JB8 637 aa12.94□□□□□ -0.34
VPS26A-209ENST00000497564 FRMD6Q96NE9 622 aa12.94□□□□□ -0.34
VPS26A-209ENST00000497564 FEVQ99581 238 aa12.94□□□□□ -0.34
VPS26A-209ENST00000497564 PRSS27Q9BQR3 290 aa12.94□□□□□ -0.34
VPS26A-209ENST00000497564 LHPPQ9H008 270 aa12.94□□□□□ -0.34
VPS26A-209ENST00000497564 CTPS2Q9NRF8 586 aa12.94□□□□□ -0.34
VPS26A-209ENST00000497564 ICAM5Q9UMF0 924 aa12.94□□□□□ -0.34
VPS26A-209ENST00000497564 MGAT4BQ9UQ53 548 aa12.94□□□□□ -0.34
VPS26A-209ENST00000497564 TP53TG5Q9Y2B4 290 aa12.94□□□□□ -0.34
VPS26A-209ENST00000497564 CARD8Q9Y2G2 431 aa12.94□□□□□ -0.34
VPS26A-209ENST00000497564 ORC6Q9Y5N6 252 aa12.94□□□□□ -0.34
VPS26A-209ENST00000497564 CHCHD2Q9Y6H1 151 aaPredicted RBP12.94□□□□□ -0.34
VPS26A-209ENST00000497564 FLNCQ14315 2725 aa12.94□□□□□ -0.34
VPS26A-209ENST00000497564 A0A087WUU8 490 aa12.93□□□□□ -0.34
VPS26A-209ENST00000497564 A0A1B0GWA3 101 aa12.93□□□□□ -0.34
VPS26A-209ENST00000497564 DENRO43583 198 aaKnown RBP12.93□□□□□ -0.34
VPS26A-209ENST00000497564 HCRTR2O43614 444 aa12.93□□□□□ -0.34
VPS26A-209ENST00000497564 SCO2O43819 266 aa12.93□□□□□ -0.34
VPS26A-209ENST00000497564 ADAP00813 363 aa12.93□□□□□ -0.34
VPS26A-209ENST00000497564 LINGO3P0C6S8 592 aa12.93□□□□□ -0.34
VPS26A-209ENST00000497564 CDH2P19022 906 aaPredicted RBP12.93□□□□□ -0.34
VPS26A-209ENST00000497564 IGFBP5P24593 272 aa12.93□□□□□ -0.34
VPS26A-209ENST00000497564 MSX1P28360 303 aa12.93□□□□□ -0.34
VPS26A-209ENST00000497564 P2RX1P51575 399 aa12.93□□□□□ -0.34
VPS26A-209ENST00000497564 SUMO3P55854 103 aaPredicted RBP12.93□□□□□ -0.34
VPS26A-209ENST00000497564 COPZ1P61923 177 aa12.93□□□□□ -0.34
VPS26A-209ENST00000497564 TAF11Q15544 211 aa12.93□□□□□ -0.34
VPS26A-209ENST00000497564 ANKRD34AQ69YU3 496 aa12.93□□□□□ -0.34
VPS26A-209ENST00000497564 FCRLBQ6BAA4 426 aa12.93□□□□□ -0.34
VPS26A-209ENST00000497564 WBP2NLQ6ICG8 309 aa12.93□□□□□ -0.34
VPS26A-209ENST00000497564 SLC30A6Q6NXT4 461 aa12.93□□□□□ -0.34
VPS26A-209ENST00000497564 ULK3Q6PHR2 472 aa12.93□□□□□ -0.34
VPS26A-209ENST00000497564 LINC00114Q6XXX2 140 aa12.93□□□□□ -0.34
VPS26A-209ENST00000497564 PRICKLE2Q7Z3G6 844 aa12.93□□□□□ -0.34
VPS26A-209ENST00000497564 NKAIN4Q8IVV8 208 aa12.93□□□□□ -0.34
VPS26A-209ENST00000497564 APLFQ8IW19 511 aaPredicted RBP12.93□□□□□ -0.34
VPS26A-209ENST00000497564 RNF113BQ8IZP6 322 aaKnown RBP12.93□□□□□ -0.34
VPS26A-209ENST00000497564 TMEM156Q8N614 296 aa12.93□□□□□ -0.34
VPS26A-209ENST00000497564 ATG16L2Q8NAA4 619 aa12.93□□□□□ -0.34
VPS26A-209ENST00000497564 CLEC1AQ8NC01 280 aa12.93□□□□□ -0.34
VPS26A-209ENST00000497564 OR4K5Q8NGD3 323 aa12.93□□□□□ -0.34
VPS26A-209ENST00000497564 OR9Q2Q8NGE9 314 aa12.93□□□□□ -0.34
VPS26A-209ENST00000497564 OR5M3Q8NGP4 307 aa12.93□□□□□ -0.34
VPS26A-209ENST00000497564 OR5W2Q8NH69 310 aa12.93□□□□□ -0.34
VPS26A-209ENST00000497564 B4GALNT2Q8NHY0 566 aa12.93□□□□□ -0.34
VPS26A-209ENST00000497564 PAQR8Q8TEZ7 354 aa12.93□□□□□ -0.34
VPS26A-209ENST00000497564 TFAP2CQ92754 450 aa12.93□□□□□ -0.34
VPS26A-209ENST00000497564 SGCZQ96LD1 299 aa12.93□□□□□ -0.34
VPS26A-209ENST00000497564 ZNF426Q9BUY5 554 aa12.93□□□□□ -0.34
VPS26A-209ENST00000497564 DGCR6LQ9BY27 220 aa12.93□□□□□ -0.34
VPS26A-209ENST00000497564 C12orf10Q9HB07 376 aa12.93□□□□□ -0.34
VPS26A-209ENST00000497564 SDHAF3Q9NRP4 125 aa12.93□□□□□ -0.34
VPS26A-209ENST00000497564 KIF17Q9P2E2 1029 aa12.93□□□□□ -0.34
VPS26A-209ENST00000497564 TEKT2Q9UIF3 430 aa12.93□□□□□ -0.34
VPS26A-209ENST00000497564 TUBD1Q9UJT1 453 aa12.93□□□□□ -0.34
VPS26A-209ENST00000497564 SLC7A7Q9UM01 511 aa12.93□□□□□ -0.34
VPS26A-209ENST00000497564 POFUT2Q9Y2G5 429 aa12.93□□□□□ -0.34
VPS26A-209ENST00000497564 AP4B1Q9Y6B7 739 aa12.93□□□□□ -0.34
VPS26A-209ENST00000497564 NCKAP5O14513 1909 aa12.93□□□□□ -0.34
VPS26A-209ENST00000497564 COL12A1Q99715 3063 aa12.93□□□□□ -0.34
VPS26A-209ENST00000497564 ANKRD33BA6NCL7 494 aa12.92□□□□□ -0.34
VPS26A-209ENST00000497564 H0YAE9 185 aa12.92□□□□□ -0.34
VPS26A-209ENST00000497564 OR10H3O60404 316 aa12.92□□□□□ -0.34
VPS26A-209ENST00000497564 UBR5O95071 2799 aaPredicted RBP12.92□□□□□ -0.34
VPS26A-209ENST00000497564 SNAP29O95721 258 aa12.92□□□□□ -0.34
VPS26A-209ENST00000497564 PGCP20142 388 aa12.92□□□□□ -0.34
VPS26A-209ENST00000497564 IFNGR2P38484 337 aa12.92□□□□□ -0.34
VPS26A-209ENST00000497564 CASP3P42574 277 aa12.92□□□□□ -0.34
VPS26A-209ENST00000497564 RBM34P42696 430 aaKnown RBP12.92□□□□□ -0.34
VPS26A-209ENST00000497564 HLCSP50747 726 aa12.92□□□□□ -0.34
VPS26A-209ENST00000497564 DLX5P56178 289 aa12.92□□□□□ -0.34
VPS26A-209ENST00000497564 ADARB1P78563 741 aaKnown RBP12.92□□□□□ -0.34
VPS26A-209ENST00000497564 MERTKQ12866 999 aa12.92□□□□□ -0.34
VPS26A-209ENST00000497564 CBFBQ13951 182 aa12.92□□□□□ -0.34
VPS26A-209ENST00000497564 C1orf94Q6P1W5 598 aa12.92□□□□□ -0.34
VPS26A-209ENST00000497564 PGBD2Q6P3X8 592 aa12.92□□□□□ -0.34
VPS26A-209ENST00000497564 IL20RBQ6UXL0 311 aa12.92□□□□□ -0.34
VPS26A-209ENST00000497564 CD300LDQ6UXZ3 194 aa12.92□□□□□ -0.34
VPS26A-209ENST00000497564 RTL4Q6ZR62 310 aa12.92□□□□□ -0.34
VPS26A-209ENST00000497564 MBOAT2Q6ZWT7 520 aa12.92□□□□□ -0.34
VPS26A-209ENST00000497564 CNTRLQ7Z7A1 2325 aa12.92□□□□□ -0.34
VPS26A-209ENST00000497564 PARP8Q8N3A8 854 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms