RNA–Protein interactions for RNA: ENST00000497345.1

CMSS1-209, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 3

Gene CMSS1, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-209ENST00000497345 CTHRC1Q96CG8 243 aa4.37□□□□□ -1.71
CMSS1-209ENST00000497345 OMA1Q96E52 524 aa4.37□□□□□ -1.71
CMSS1-209ENST00000497345 DNAJA3Q96EY1 480 aa4.37□□□□□ -1.71
CMSS1-209ENST00000497345 ZNF503Q96F45 646 aa4.37□□□□□ -1.71
CMSS1-209ENST00000497345 SH3YL1Q96HL8 342 aaPredicted RBP4.37□□□□□ -1.71
CMSS1-209ENST00000497345 NAF1Q96HR8 494 aaKnown RBP4.37□□□□□ -1.71
CMSS1-209ENST00000497345 FBXL20Q96IG2 436 aa4.37□□□□□ -1.71
CMSS1-209ENST00000497345 C7orf34Q96L11 122 aa4.37□□□□□ -1.71
CMSS1-209ENST00000497345 ZNF354BQ96LW1 612 aa4.37□□□□□ -1.71
CMSS1-209ENST00000497345 ZNF570Q96NI8 536 aa4.37□□□□□ -1.71
CMSS1-209ENST00000497345 SLC46A1Q96NT5 459 aa4.37□□□□□ -1.71
CMSS1-209ENST00000497345 STACQ99469 402 aa4.37□□□□□ -1.71
CMSS1-209ENST00000497345 ZNF184Q99676 751 aaPredicted RBP4.37□□□□□ -1.71
CMSS1-209ENST00000497345 LPAR4Q99677 370 aa4.37□□□□□ -1.71
CMSS1-209ENST00000497345 MCHR1Q99705 422 aa4.37□□□□□ -1.71
CMSS1-209ENST00000497345 FNDC11Q9BVV2 318 aa4.37□□□□□ -1.71
CMSS1-209ENST00000497345 PINK1Q9BXM7 581 aa4.37□□□□□ -1.71
CMSS1-209ENST00000497345 DEFB126Q9BYW3 111 aa4.37□□□□□ -1.71
CMSS1-209ENST00000497345 WWTR1Q9GZV5 400 aa4.37□□□□□ -1.71
CMSS1-209ENST00000497345 MTHFD2LQ9H903 347 aaPredicted RBP4.37□□□□□ -1.71
CMSS1-209ENST00000497345 ZNF160Q9HCG1 818 aa4.37□□□□□ -1.71
CMSS1-209ENST00000497345 BCL2L10Q9HD36 194 aa4.37□□□□□ -1.71
CMSS1-209ENST00000497345 IL1RAPQ9NPH3 570 aa4.37□□□□□ -1.71
CMSS1-209ENST00000497345 KLHL28Q9NXS3 571 aa4.37□□□□□ -1.71
CMSS1-209ENST00000497345 CALML5Q9NZT1 146 aa4.37□□□□□ -1.71
CMSS1-209ENST00000497345 TMCC3Q9ULS5 477 aa4.37□□□□□ -1.71
CMSS1-209ENST00000497345 SLC9A8Q9Y2E8 581 aa4.37□□□□□ -1.71
CMSS1-209ENST00000497345 GMEB1Q9Y692 573 aa4.37□□□□□ -1.71
CMSS1-209ENST00000497345 ENPP4Q9Y6X5 453 aa4.37□□□□□ -1.71
CMSS1-209ENST00000497345 NINQ8N4C6 2090 aa4.37□□□□□ -1.71
CMSS1-209ENST00000497345 COL5A1P20908 1838 aaPredicted RBP4.37□□□□□ -1.71
CMSS1-209ENST00000497345 SEC16AO15027 2179 aa4.36□□□□□ -1.71
CMSS1-209ENST00000497345 IGLV3-12A0A075B6K2 115 aa4.36□□□□□ -1.71
CMSS1-209ENST00000497345 NSG1A0A0A6YYJ2 146 aa4.36□□□□□ -1.71
CMSS1-209ENST00000497345 LOC101059948A0A1B0GTJ6 334 aa4.36□□□□□ -1.71
CMSS1-209ENST00000497345 AGAP5A6NIR3 686 aa4.36□□□□□ -1.71
CMSS1-209ENST00000497345 SAGE2PA6NJ88 616 aa4.36□□□□□ -1.71
CMSS1-209ENST00000497345 A6NL46 340 aa4.36□□□□□ -1.71
CMSS1-209ENST00000497345 G3V3Y1 287 aa4.36□□□□□ -1.71
CMSS1-209ENST00000497345 SCDO00767 359 aa4.36□□□□□ -1.71
CMSS1-209ENST00000497345 AP3D1O14617 1153 aa4.36□□□□□ -1.71
CMSS1-209ENST00000497345 FFAR1O14842 300 aa4.36□□□□□ -1.71
CMSS1-209ENST00000497345 KIAA0513O60268 411 aa4.36□□□□□ -1.71
CMSS1-209ENST00000497345 PIP5K1CO60331 668 aa4.36□□□□□ -1.71
CMSS1-209ENST00000497345 OR10H3O60404 316 aa4.36□□□□□ -1.71
CMSS1-209ENST00000497345 CDC40O60508 579 aaKnown RBP eCLIP4.36□□□□□ -1.71
CMSS1-209ENST00000497345 RAD1O60671 282 aa4.36□□□□□ -1.71
CMSS1-209ENST00000497345 CDC14BO60729 498 aa4.36□□□□□ -1.71
CMSS1-209ENST00000497345 ICOSLGO75144 302 aa4.36□□□□□ -1.71
CMSS1-209ENST00000497345 OR2J2O76002 312 aa4.36□□□□□ -1.71
CMSS1-209ENST00000497345 LGI1O95970 557 aa4.36□□□□□ -1.71
CMSS1-209ENST00000497345 CSTAP01040 98 aa4.36□□□□□ -1.71
CMSS1-209ENST00000497345 IGKV3-11P04433 115 aa4.36□□□□□ -1.71
CMSS1-209ENST00000497345 DBIP07108 87 aaKnown RBP4.36□□□□□ -1.71
CMSS1-209ENST00000497345 H1F0P07305 194 aaKnown RBP4.36□□□□□ -1.71
CMSS1-209ENST00000497345 IGFBP1P08833 259 aaPredicted RBP4.36□□□□□ -1.71
CMSS1-209ENST00000497345 THRBP10828 461 aa4.36□□□□□ -1.71
CMSS1-209ENST00000497345 ETS2P15036 469 aa4.36□□□□□ -1.71
CMSS1-209ENST00000497345 ZNF26P17031 533 aaPredicted RBP4.36□□□□□ -1.71
CMSS1-209ENST00000497345 ITGA2P17301 1181 aa4.36□□□□□ -1.71
CMSS1-209ENST00000497345 NAT1P18440 290 aa4.36□□□□□ -1.71
CMSS1-209ENST00000497345 DRD5P21918 477 aa4.36□□□□□ -1.71
CMSS1-209ENST00000497345 F8A1P23610 371 aa4.36□□□□□ -1.71
CMSS1-209ENST00000497345 POLR2IP36954 125 aaKnown RBP4.36□□□□□ -1.71
CMSS1-209ENST00000497345 PIGAP37287 484 aa4.36□□□□□ -1.71
CMSS1-209ENST00000497345 PPICP45877 212 aa4.36□□□□□ -1.71
CMSS1-209ENST00000497345 DAPP51397 102 aa4.36□□□□□ -1.71
CMSS1-209ENST00000497345 FBXW4P57775 412 aa4.36□□□□□ -1.71
CMSS1-209ENST00000497345 SLC26A5P58743 744 aa4.36□□□□□ -1.71
CMSS1-209ENST00000497345 RPS15P62841 145 aaKnown RBP4.36□□□□□ -1.71
CMSS1-209ENST00000497345 EEF1A1P68104 462 aaKnown RBP4.36□□□□□ -1.71
CMSS1-209ENST00000497345 IL13RA1P78552 427 aa4.36□□□□□ -1.71
CMSS1-209ENST00000497345 SRSF6Q13247 344 aaKnown RBP4.36□□□□□ -1.71
CMSS1-209ENST00000497345 BIKQ13323 160 aa4.36□□□□□ -1.71
CMSS1-209ENST00000497345 DNASE1L3Q13609 305 aa4.36□□□□□ -1.71
CMSS1-209ENST00000497345 RAPSNQ13702 412 aa4.36□□□□□ -1.71
CMSS1-209ENST00000497345 DAG1Q14118 895 aa4.36□□□□□ -1.71
CMSS1-209ENST00000497345 PCOLCEQ15113 449 aa4.36□□□□□ -1.71
CMSS1-209ENST00000497345 EBPQ15125 230 aaKnown RBP4.36□□□□□ -1.71
CMSS1-209ENST00000497345 SEC23BQ15437 767 aa4.36□□□□□ -1.71
CMSS1-209ENST00000497345 TBR1Q16650 682 aa4.36□□□□□ -1.71
CMSS1-209ENST00000497345 LIN52Q52LA3 116 aa4.36□□□□□ -1.71
CMSS1-209ENST00000497345 ENTPD8Q5MY95 495 aa4.36□□□□□ -1.71
CMSS1-209ENST00000497345 DCST1Q5T197 706 aa4.36□□□□□ -1.71
CMSS1-209ENST00000497345 ATP1A1-AS1Q5TC04 95 aa4.36□□□□□ -1.71
CMSS1-209ENST00000497345 OR5M10Q6IEU7 315 aa4.36□□□□□ -1.71
CMSS1-209ENST00000497345 PPP4R4Q6NUP7 873 aa4.36□□□□□ -1.71
CMSS1-209ENST00000497345 ZCCHC12Q6PEW1 402 aa4.36□□□□□ -1.71
CMSS1-209ENST00000497345 PODNL1Q6PEZ8 512 aa4.36□□□□□ -1.71
CMSS1-209ENST00000497345 SHQ1Q6PI26 577 aaKnown RBP4.36□□□□□ -1.71
CMSS1-209ENST00000497345 HSDL2Q6YN16 418 aa4.36□□□□□ -1.71
CMSS1-209ENST00000497345 Q6ZPB1 254 aaPredicted RBP4.36□□□□□ -1.71
CMSS1-209ENST00000497345 PPP1R32Q7Z5V6 425 aa4.36□□□□□ -1.71
CMSS1-209ENST00000497345 HIPK1Q86Z02 1210 aa4.36□□□□□ -1.71
CMSS1-209ENST00000497345 SLC5A8Q8N695 610 aa4.36□□□□□ -1.71
CMSS1-209ENST00000497345 METTL25Q8N6Q8 603 aa4.36□□□□□ -1.71
CMSS1-209ENST00000497345 AQP11Q8NBQ7 271 aa4.36□□□□□ -1.71
CMSS1-209ENST00000497345 CHDHQ8NE62 594 aaPredicted RBP4.36□□□□□ -1.71
CMSS1-209ENST00000497345 NFAM1Q8NET5 270 aaPredicted RBP4.36□□□□□ -1.71
CMSS1-209ENST00000497345 B3GNT7Q8NFL0 401 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms