RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 OR5L2Q8NGL0 311 aa2.99□□□□□ -1.93
SMC4-225ENST00000497203 ZNF606Q8WXB4 792 aa2.99□□□□□ -1.93
SMC4-225ENST00000497203 PIGCQ92535 297 aa2.99□□□□□ -1.93
SMC4-225ENST00000497203 BADQ92934 168 aa2.99□□□□□ -1.93
SMC4-225ENST00000497203 COQ2Q96H96 371 aa2.99□□□□□ -1.93
SMC4-225ENST00000497203 VSIG2Q96IQ7 327 aa2.99□□□□□ -1.93
SMC4-225ENST00000497203 MS4A14Q96JA4 679 aa2.99□□□□□ -1.93
SMC4-225ENST00000497203 CYP2S1Q96SQ9 504 aa2.99□□□□□ -1.93
SMC4-225ENST00000497203 MCHR1Q99705 422 aa2.99□□□□□ -1.93
SMC4-225ENST00000497203 SLC39A3Q9BRY0 314 aa2.99□□□□□ -1.93
SMC4-225ENST00000497203 EDEM2Q9BV94 578 aa2.99□□□□□ -1.93
SMC4-225ENST00000497203 VCX2Q9H322 139 aa2.99□□□□□ -1.93
SMC4-225ENST00000497203 GLIPR2Q9H4G4 154 aa2.99□□□□□ -1.93
SMC4-225ENST00000497203 ISG20L2Q9H9L3 353 aaKnown RBP2.99□□□□□ -1.93
SMC4-225ENST00000497203 SLC17A5Q9NRA2 495 aa2.99□□□□□ -1.93
SMC4-225ENST00000497203 SLC7A10Q9NS82 523 aa2.99□□□□□ -1.93
SMC4-225ENST00000497203 VNN3Q9NY84 501 aa2.99□□□□□ -1.93
SMC4-225ENST00000497203 WARS2Q9UGM6 360 aaKnown RBP2.99□□□□□ -1.93
SMC4-225ENST00000497203 LCMT1Q9UIC8 334 aa2.99□□□□□ -1.93
SMC4-225ENST00000497203 VSIG4Q9Y279 399 aa2.99□□□□□ -1.93
SMC4-225ENST00000497203 PLLPQ9Y342 182 aa2.99□□□□□ -1.93
SMC4-225ENST00000497203 PNPLA6Q8IY17 1366 aa2.99□□□□□ -1.93
SMC4-225ENST00000497203 IGHV7-81A0A0B4J1V7 117 aa2.98□□□□□ -1.93
SMC4-225ENST00000497203 F5H6K3 240 aa2.98□□□□□ -1.93
SMC4-225ENST00000497203 TNFSF11O14788 317 aa2.98□□□□□ -1.93
SMC4-225ENST00000497203 RS1O15537 224 aa2.98□□□□□ -1.93
SMC4-225ENST00000497203 RIPK2O43353 540 aa2.98□□□□□ -1.93
SMC4-225ENST00000497203 PRKYO43930 277 aa2.98□□□□□ -1.93
SMC4-225ENST00000497203 LYPLA1O75608 230 aaPredicted RBP2.98□□□□□ -1.93
SMC4-225ENST00000497203 GNA14O95837 355 aa2.98□□□□□ -1.93
SMC4-225ENST00000497203 OPN1MWP04001 364 aa2.98□□□□□ -1.93
SMC4-225ENST00000497203 CCDC166P0CW27 439 aa2.98□□□□□ -1.93
SMC4-225ENST00000497203 OPN1MW2P0DN77 364 aa2.98□□□□□ -1.93
SMC4-225ENST00000497203 OPN1MW3P0DN78 364 aa2.98□□□□□ -1.93
SMC4-225ENST00000497203 RNH1P13489 461 aaKnown RBP2.98□□□□□ -1.93
SMC4-225ENST00000497203 CCDC130P13994 396 aa2.98□□□□□ -1.93
SMC4-225ENST00000497203 HOXD10P28358 340 aa2.98□□□□□ -1.93
SMC4-225ENST00000497203 GRIA1P42261 906 aa2.98□□□□□ -1.93
SMC4-225ENST00000497203 NOVP48745 357 aa2.98□□□□□ -1.93
SMC4-225ENST00000497203 CEBPDP49716 269 aaPredicted RBP2.98□□□□□ -1.93
SMC4-225ENST00000497203 PRKXP51817 358 aa2.98□□□□□ -1.93
SMC4-225ENST00000497203 KLRC3Q07444 240 aa2.98□□□□□ -1.93
SMC4-225ENST00000497203 FGL1Q08830 312 aa2.98□□□□□ -1.93
SMC4-225ENST00000497203 RIPK1Q13546 671 aa2.98□□□□□ -1.93
SMC4-225ENST00000497203 LRRC36Q1X8D7 754 aa2.98□□□□□ -1.93
SMC4-225ENST00000497203 CFAP221Q4G0U5 840 aa2.98□□□□□ -1.93
SMC4-225ENST00000497203 CEP55Q53EZ4 464 aa2.98□□□□□ -1.93
SMC4-225ENST00000497203 CCDC137Q6PK04 289 aaKnown RBP2.98□□□□□ -1.93
SMC4-225ENST00000497203 LCA5Q86VQ0 697 aa2.98□□□□□ -1.93
SMC4-225ENST00000497203 PPP1R27Q86WC6 154 aa2.98□□□□□ -1.93
SMC4-225ENST00000497203 C17orf82Q86X59 251 aaPredicted RBP2.98□□□□□ -1.93
SMC4-225ENST00000497203 UBQLNLQ8IYU4 475 aa2.98□□□□□ -1.93
SMC4-225ENST00000497203 TMEM123Q8N131 208 aa2.98□□□□□ -1.93
SMC4-225ENST00000497203 ZCCHC7Q8N3Z6 543 aaKnown RBP2.98□□□□□ -1.93
SMC4-225ENST00000497203 OR9A1PQ8NGU1 263 aa2.98□□□□□ -1.93
SMC4-225ENST00000497203 MAIP1Q8WWC4 291 aa2.98□□□□□ -1.93
SMC4-225ENST00000497203 EFHD2Q96C19 240 aaPredicted RBP2.98□□□□□ -1.93
SMC4-225ENST00000497203 FAM122AQ96E09 287 aa2.98□□□□□ -1.93
SMC4-225ENST00000497203 SLC41A3Q96GZ6 507 aa2.98□□□□□ -1.93
SMC4-225ENST00000497203 TMEM43Q9BTV4 400 aa2.98□□□□□ -1.93
SMC4-225ENST00000497203 SPATA16Q9BXB7 569 aa2.98□□□□□ -1.93
SMC4-225ENST00000497203 RHBGQ9H310 441 aa2.98□□□□□ -1.93
SMC4-225ENST00000497203 Q9H3A6 140 aa2.98□□□□□ -1.93
SMC4-225ENST00000497203 FANCFQ9NPI8 374 aa2.98□□□□□ -1.93
SMC4-225ENST00000497203 SMOXQ9NWM0 555 aa2.98□□□□□ -1.93
SMC4-225ENST00000497203 B3GNT2Q9NY97 397 aa2.98□□□□□ -1.93
SMC4-225ENST00000497203 SIGLEC8Q9NYZ4 499 aa2.98□□□□□ -1.93
SMC4-225ENST00000497203 Q9UF83 564 aa2.98□□□□□ -1.93
SMC4-225ENST00000497203 DCDC2Q9UHG0 476 aa2.98□□□□□ -1.93
SMC4-225ENST00000497203 CA5BQ9Y2D0 317 aa2.98□□□□□ -1.93
SMC4-225ENST00000497203 AK6Q9Y3D8 172 aaKnown RBP2.98□□□□□ -1.93
SMC4-225ENST00000497203 IKBKGQ9Y6K9 419 aa2.98□□□□□ -1.93
SMC4-225ENST00000497203 TRAV26-1A0A087WT03 109 aa2.97□□□□□ -1.93
SMC4-225ENST00000497203 A0A1B0GWB2 263 aa2.97□□□□□ -1.93
SMC4-225ENST00000497203 LRP5LA4QPB2 252 aa2.97□□□□□ -1.93
SMC4-225ENST00000497203 ZNF705EA8MWA4 302 aaPredicted RBP2.97□□□□□ -1.93
SMC4-225ENST00000497203 ZNF208O43345 1280 aa2.97□□□□□ -1.93
SMC4-225ENST00000497203 SEMG1P04279 462 aa2.97□□□□□ -1.93
SMC4-225ENST00000497203 ALOX5P09917 674 aa2.97□□□□□ -1.93
SMC4-225ENST00000497203 IGLL1P15814 213 aa2.97□□□□□ -1.93
SMC4-225ENST00000497203 MMP11P24347 488 aa2.97□□□□□ -1.93
SMC4-225ENST00000497203 ANXA13P27216 316 aa2.97□□□□□ -1.93
SMC4-225ENST00000497203 FGF9P31371 208 aaPredicted RBP2.97□□□□□ -1.93
SMC4-225ENST00000497203 DAP3P51398 398 aaKnown RBP2.97□□□□□ -1.93
SMC4-225ENST00000497203 CUL1Q13616 776 aa2.97□□□□□ -1.93
SMC4-225ENST00000497203 DPYSL2Q16555 572 aa2.97□□□□□ -1.93
SMC4-225ENST00000497203 AANATQ16613 207 aa2.97□□□□□ -1.93
SMC4-225ENST00000497203 TRIM16LQ309B1 348 aa2.97□□□□□ -1.93
SMC4-225ENST00000497203 SLC25A52Q3SY17 297 aa2.97□□□□□ -1.93
SMC4-225ENST00000497203 TP53I3Q53FA7 332 aa2.97□□□□□ -1.93
SMC4-225ENST00000497203 ATL3Q6DD88 541 aa2.97□□□□□ -1.93
SMC4-225ENST00000497203 VSTM4Q8IW00 320 aa2.97□□□□□ -1.93
SMC4-225ENST00000497203 SKA3Q8IX90 412 aa2.97□□□□□ -1.93
SMC4-225ENST00000497203 NRMQ8IXM6 262 aa2.97□□□□□ -1.93
SMC4-225ENST00000497203 ZNF679Q8IYX0 411 aa2.97□□□□□ -1.93
SMC4-225ENST00000497203 SVOPLQ8N434 492 aa2.97□□□□□ -1.93
SMC4-225ENST00000497203 LINC00612Q8N6U2 182 aa2.97□□□□□ -1.93
SMC4-225ENST00000497203 ATP6V0D2Q8N8Y2 350 aa2.97□□□□□ -1.93
SMC4-225ENST00000497203 EIF1ADQ8N9N8 165 aaKnown RBP2.97□□□□□ -1.93
SMC4-225ENST00000497203 OR4D9Q8NGE8 314 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms