RNA–Protein interactions for RNA: ENST00000496458.1

SF3B1-212, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 475 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-212ENST00000496458 BIRC7Q96CA5 298 aa3.97□□□□□ -1.77
SF3B1-212ENST00000496458 CAPNS2Q96L46 248 aa3.97□□□□□ -1.77
SF3B1-212ENST00000496458 SENP8Q96LD8 212 aa3.97□□□□□ -1.77
SF3B1-212ENST00000496458 GAL3ST1Q99999 423 aa3.97□□□□□ -1.77
SF3B1-212ENST00000496458 TRPV6Q9H1D0 765 aa3.97□□□□□ -1.77
SF3B1-212ENST00000496458 SLC26A1Q9H2B4 701 aa3.97□□□□□ -1.77
SF3B1-212ENST00000496458 FN3KRPQ9HA64 309 aa3.97□□□□□ -1.77
SF3B1-212ENST00000496458 CIDEBQ9UHD4 219 aa3.97□□□□□ -1.77
SF3B1-212ENST00000496458 PHLPP1O60346 1717 aa3.97□□□□□ -1.77
SF3B1-212ENST00000496458 ARHGEF28Q8N1W1 1705 aaKnown RBP3.97□□□□□ -1.77
SF3B1-212ENST00000496458 ABCC4O15439 1325 aa3.96□□□□□ -1.77
SF3B1-212ENST00000496458 SF3B1O75533 1304 aaKnown RBP eCLIP3.96□□□□□ -1.77
SF3B1-212ENST00000496458 KIF7Q2M1P5 1343 aa3.96□□□□□ -1.77
SF3B1-212ENST00000496458 IGKV6D-21A0A0A0MT36 114 aa3.96□□□□□ -1.78
SF3B1-212ENST00000496458 IGHV3-35A0A0C4DH35 117 aa3.96□□□□□ -1.78
SF3B1-212ENST00000496458 GSAPA4D1B5 854 aa3.96□□□□□ -1.78
SF3B1-212ENST00000496458 HELTA6NFD8 242 aa3.96□□□□□ -1.78
SF3B1-212ENST00000496458 HDAC3O15379 428 aa3.96□□□□□ -1.78
SF3B1-212ENST00000496458 PSMD3O43242 534 aa3.96□□□□□ -1.78
SF3B1-212ENST00000496458 GPAA1O43292 621 aa3.96□□□□□ -1.78
SF3B1-212ENST00000496458 TXNDC12O95881 172 aa3.96□□□□□ -1.78
SF3B1-212ENST00000496458 OTCP00480 354 aa3.96□□□□□ -1.78
SF3B1-212ENST00000496458 SERPINA3P01011 423 aa3.96□□□□□ -1.78
SF3B1-212ENST00000496458 NPPAP01160 153 aa3.96□□□□□ -1.78
SF3B1-212ENST00000496458 UGT2B4P06133 528 aa3.96□□□□□ -1.78
SF3B1-212ENST00000496458 SNRPCP09234 159 aaKnown RBP3.96□□□□□ -1.78
SF3B1-212ENST00000496458 SLC35E2P0CK97 266 aa3.96□□□□□ -1.78
SF3B1-212ENST00000496458 BMI1P35226 326 aa3.96□□□□□ -1.78
SF3B1-212ENST00000496458 RDXP35241 583 aaKnown RBP3.96□□□□□ -1.78
SF3B1-212ENST00000496458 NUMBP49757 651 aa3.96□□□□□ -1.78
SF3B1-212ENST00000496458 SUCLG1P53597 346 aaKnown RBP3.96□□□□□ -1.78
SF3B1-212ENST00000496458 PRMT2P55345 433 aa3.96□□□□□ -1.78
SF3B1-212ENST00000496458 CARD18P57730 90 aa3.96□□□□□ -1.78
SF3B1-212ENST00000496458 ERVPABLB-1P60509 514 aa3.96□□□□□ -1.78
SF3B1-212ENST00000496458 TPM4P67936 248 aa3.96□□□□□ -1.78
SF3B1-212ENST00000496458 CCZ1BP86790 482 aa3.96□□□□□ -1.78
SF3B1-212ENST00000496458 CCZ1P86791 482 aaPredicted RBP3.96□□□□□ -1.78
SF3B1-212ENST00000496458 FUT7Q11130 342 aa3.96□□□□□ -1.78
SF3B1-212ENST00000496458 CARTPTQ16568 116 aa3.96□□□□□ -1.78
SF3B1-212ENST00000496458 KLHL40Q2TBA0 621 aa3.96□□□□□ -1.78
SF3B1-212ENST00000496458 BCL7AQ4VC05 210 aa3.96□□□□□ -1.78
SF3B1-212ENST00000496458 MPPE1Q53F39 396 aa3.96□□□□□ -1.78
SF3B1-212ENST00000496458 ARMC12Q5T9G4 340 aa3.96□□□□□ -1.78
SF3B1-212ENST00000496458 RHBDD2Q6NTF9 364 aa3.96□□□□□ -1.78
SF3B1-212ENST00000496458 FAM159AQ6UWV7 190 aa3.96□□□□□ -1.78
SF3B1-212ENST00000496458 C2orf66Q6UXQ4 117 aa3.96□□□□□ -1.78
SF3B1-212ENST00000496458 SYT10Q6XYQ8 523 aa3.96□□□□□ -1.78
SF3B1-212ENST00000496458 BIVMQ86UB2 503 aa3.96□□□□□ -1.78
SF3B1-212ENST00000496458 C10orf67Q8IYJ2 551 aa3.96□□□□□ -1.78
SF3B1-212ENST00000496458 ZNF397Q8NF99 534 aaPredicted RBP3.96□□□□□ -1.78
SF3B1-212ENST00000496458 GLYATL1Q969I3 302 aa3.96□□□□□ -1.78
SF3B1-212ENST00000496458 ALG12Q9BV10 488 aa3.96□□□□□ -1.78
SF3B1-212ENST00000496458 FAM107BQ9H098 131 aa3.96□□□□□ -1.78
SF3B1-212ENST00000496458 IKZF5Q9H5V7 419 aa3.96□□□□□ -1.78
SF3B1-212ENST00000496458 WDR76Q9H967 626 aa3.96□□□□□ -1.78
SF3B1-212ENST00000496458 DIMT1Q9UNQ2 313 aaKnown RBP3.96□□□□□ -1.78
SF3B1-212ENST00000496458 MOKQ9UQ07 419 aa3.96□□□□□ -1.78
SF3B1-212ENST00000496458 ATG4BQ9Y4P1 393 aa3.96□□□□□ -1.78
SF3B1-212ENST00000496458 KLF2Q9Y5W3 355 aaPredicted RBP3.96□□□□□ -1.78
SF3B1-212ENST00000496458 COMMD3-BMI1R4GMX3 469 aa3.96□□□□□ -1.78
SF3B1-212ENST00000496458 EVC2Q86UK5 1308 aa3.95□□□□□ -1.78
SF3B1-212ENST00000496458 COL16A1Q07092 1604 aaPredicted RBP3.95□□□□□ -1.78
SF3B1-212ENST00000496458 FMN2Q9NZ56 1722 aa3.95□□□□□ -1.78
SF3B1-212ENST00000496458 QRICH2Q9H0J4 1663 aa3.95□□□□□ -1.78
SF3B1-212ENST00000496458 CDC42BPGQ6DT37 1551 aa3.95□□□□□ -1.78
SF3B1-212ENST00000496458 RALGAPBQ86X10 1494 aa3.95□□□□□ -1.78
SF3B1-212ENST00000496458 EIF3AQ14152 1382 aaKnown RBP3.95□□□□□ -1.78
SF3B1-212ENST00000496458 PARD3Q8TEW0 1356 aa3.95□□□□□ -1.78
SF3B1-212ENST00000496458 JCADQ9P266 1359 aa3.95□□□□□ -1.78
SF3B1-212ENST00000496458 LOC100653049A0A140TA62 436 aa3.95□□□□□ -1.78
SF3B1-212ENST00000496458 FAM240BA0A1B0GVZ2 78 aa3.95□□□□□ -1.78
SF3B1-212ENST00000496458 MBLAC1A4D2B0 266 aaPredicted RBP3.95□□□□□ -1.78
SF3B1-212ENST00000496458 YJEFN3A6XGL0 299 aa3.95□□□□□ -1.78
SF3B1-212ENST00000496458 ANKRD30BLA7E2S9 258 aa3.95□□□□□ -1.78
SF3B1-212ENST00000496458 CETN3O15182 167 aa3.95□□□□□ -1.78
SF3B1-212ENST00000496458 ATP8B1O43520 1251 aa3.95□□□□□ -1.78
SF3B1-212ENST00000496458 GMNNO75496 209 aa3.95□□□□□ -1.78
SF3B1-212ENST00000496458 KRT34O76011 436 aa3.95□□□□□ -1.78
SF3B1-212ENST00000496458 NUDT14O95848 222 aa3.95□□□□□ -1.78
SF3B1-212ENST00000496458 IGHV3-9P01782 118 aa3.95□□□□□ -1.78
SF3B1-212ENST00000496458 KRT6AP02538 564 aa3.95□□□□□ -1.78
SF3B1-212ENST00000496458 FCER2P06734 321 aa3.95□□□□□ -1.78
SF3B1-212ENST00000496458 CAPN1P07384 714 aa3.95□□□□□ -1.78
SF3B1-212ENST00000496458 UBTFL6P0CB48 400 aaPredicted RBP3.95□□□□□ -1.78
SF3B1-212ENST00000496458 GCFC2P16383 781 aaKnown RBP3.95□□□□□ -1.78
SF3B1-212ENST00000496458 CYP3A5P20815 502 aa3.95□□□□□ -1.78
SF3B1-212ENST00000496458 CHMLP26374 656 aa3.95□□□□□ -1.78
SF3B1-212ENST00000496458 MARCKSP29966 332 aaPredicted RBP3.95□□□□□ -1.78
SF3B1-212ENST00000496458 CHI3L1P36222 383 aaPredicted RBP3.95□□□□□ -1.78
SF3B1-212ENST00000496458 EPS15P42566 896 aa3.95□□□□□ -1.78
SF3B1-212ENST00000496458 CEBPDP49716 269 aaPredicted RBP3.95□□□□□ -1.78
SF3B1-212ENST00000496458 RPL23AP62750 156 aaKnown RBP3.95□□□□□ -1.78
SF3B1-212ENST00000496458 CAPRIN1Q14444 709 aaKnown RBP3.95□□□□□ -1.78
SF3B1-212ENST00000496458 TGIF1Q15583 401 aa3.95□□□□□ -1.78
SF3B1-212ENST00000496458 C2orf83Q53S99 150 aa3.95□□□□□ -1.78
SF3B1-212ENST00000496458 PHYHD1Q5SRE7 291 aa3.95□□□□□ -1.78
SF3B1-212ENST00000496458 C9orf129Q5T035 196 aaKnown RBP3.95□□□□□ -1.78
SF3B1-212ENST00000496458 CCDC122Q5T0U0 273 aa3.95□□□□□ -1.78
SF3B1-212ENST00000496458 SEL1L2Q5TEA6 688 aa3.95□□□□□ -1.78
SF3B1-212ENST00000496458 METTL11BQ5VVY1 283 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms