RNA–Protein interactions for RNA: ENST00000495232.5

CSNK1E-213, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-213ENST00000495232 APOBEC1P41238 236 aaKnown RBP10.9□□□□□ -0.66
CSNK1E-213ENST00000495232 SLC7A2P52569 658 aa10.9□□□□□ -0.66
CSNK1E-213ENST00000495232 PSME3P61289 254 aa10.9□□□□□ -0.66
CSNK1E-213ENST00000495232 NCALDP61601 193 aa10.9□□□□□ -0.66
CSNK1E-213ENST00000495232 LIPEQ05469 1076 aa10.9□□□□□ -0.66
CSNK1E-213ENST00000495232 SRSF1Q07955 248 aaKnown RBP eCLIP10.9□□□□□ -0.661e-6■□□□□ 11.3
CSNK1E-213ENST00000495232 EPS8Q12929 822 aa10.9□□□□□ -0.66
CSNK1E-213ENST00000495232 SELENBP1Q13228 472 aa10.9□□□□□ -0.66
CSNK1E-213ENST00000495232 VEZF1Q14119 521 aa10.9□□□□□ -0.66
CSNK1E-213ENST00000495232 KRT72Q14CN4 511 aa10.9□□□□□ -0.66
CSNK1E-213ENST00000495232 SLC25A53Q5H9E4 307 aa10.9□□□□□ -0.66
CSNK1E-213ENST00000495232 PPP4R4Q6NUP7 873 aa10.9□□□□□ -0.66
CSNK1E-213ENST00000495232 C3orf33Q6P1S2 294 aa10.9□□□□□ -0.66
CSNK1E-213ENST00000495232 DHRS4L2Q6PKH6 230 aa10.9□□□□□ -0.66
CSNK1E-213ENST00000495232 GRINAQ7Z429 371 aa10.9□□□□□ -0.66
CSNK1E-213ENST00000495232 P4HA3Q7Z4N8 544 aa10.9□□□□□ -0.66
CSNK1E-213ENST00000495232 MRGPRGQ86SM5 289 aa10.9□□□□□ -0.66
CSNK1E-213ENST00000495232 CALHM3Q86XJ0 350 aa10.9□□□□□ -0.66
CSNK1E-213ENST00000495232 SLC15A3Q8IY34 581 aa10.9□□□□□ -0.66
CSNK1E-213ENST00000495232 CLIP4Q8N3C7 705 aa10.9□□□□□ -0.66
CSNK1E-213ENST00000495232 SMYD1Q8NB12 490 aa10.9□□□□□ -0.66
CSNK1E-213ENST00000495232 TNIP2Q8NFZ5 429 aa10.9□□□□□ -0.66
CSNK1E-213ENST00000495232 POC1BQ8TC44 478 aa10.9□□□□□ -0.66
CSNK1E-213ENST00000495232 SLC35B4Q969S0 331 aa10.9□□□□□ -0.66
CSNK1E-213ENST00000495232 ZNF583Q96ND8 569 aa10.9□□□□□ -0.66
CSNK1E-213ENST00000495232 DMRTA2Q96SC8 542 aa10.9□□□□□ -0.66
CSNK1E-213ENST00000495232 KLHDC3Q9BQ90 382 aa10.9□□□□□ -0.66
CSNK1E-213ENST00000495232 TUBA1CQ9BQE3 449 aa10.9□□□□□ -0.66
CSNK1E-213ENST00000495232 TTYH2Q9BSA4 534 aa10.9□□□□□ -0.66
CSNK1E-213ENST00000495232 EVA1AQ9H8M9 152 aa10.9□□□□□ -0.66
CSNK1E-213ENST00000495232 CALHM2Q9HA72 323 aa10.9□□□□□ -0.66
CSNK1E-213ENST00000495232 SPAG4Q9NPE6 437 aa10.9□□□□□ -0.66
CSNK1E-213ENST00000495232 TIGARQ9NQ88 270 aa10.9□□□□□ -0.66
CSNK1E-213ENST00000495232 ARL8BQ9NVJ2 186 aa10.9□□□□□ -0.66
CSNK1E-213ENST00000495232 ADA2Q9NZK5 511 aa10.9□□□□□ -0.66
CSNK1E-213ENST00000495232 RPS6KB2Q9UBS0 482 aa10.9□□□□□ -0.66
CSNK1E-213ENST00000495232 HIVEP3Q5T1R4 2406 aa10.9□□□□□ -0.66
CSNK1E-213ENST00000495232 HEATR5AQ86XA9 2040 aa10.9□□□□□ -0.66
CSNK1E-213ENST00000495232 CLEC18AA5D8T8 446 aa10.89□□□□□ -0.67
CSNK1E-213ENST00000495232 CD8B2A6NJW9 211 aa10.89□□□□□ -0.67
CSNK1E-213ENST00000495232 CLCA1A8K7I4 914 aa10.89□□□□□ -0.67
CSNK1E-213ENST00000495232 FAAHO00519 579 aa10.89□□□□□ -0.67
CSNK1E-213ENST00000495232 AP3D1O14617 1153 aa10.89□□□□□ -0.67
CSNK1E-213ENST00000495232 GMNNO75496 209 aa10.89□□□□□ -0.67
CSNK1E-213ENST00000495232 MFN2O95140 757 aa10.89□□□□□ -0.67
CSNK1E-213ENST00000495232 OPN1LWP04000 364 aa10.89□□□□□ -0.67
CSNK1E-213ENST00000495232 GLI4P10075 376 aa10.89□□□□□ -0.67
CSNK1E-213ENST00000495232 PSMA4P25789 261 aaKnown RBP10.89□□□□□ -0.67
CSNK1E-213ENST00000495232 FKBP2P26885 142 aaKnown RBP10.89□□□□□ -0.67
CSNK1E-213ENST00000495232 SLC1A3P43003 542 aa10.89□□□□□ -0.67
CSNK1E-213ENST00000495232 EIF1AXP47813 144 aaKnown RBP10.89□□□□□ -0.67
CSNK1E-213ENST00000495232 GZMMP51124 257 aa10.89□□□□□ -0.67
CSNK1E-213ENST00000495232 POLR2HP52434 150 aaKnown RBP10.89□□□□□ -0.67
CSNK1E-213ENST00000495232 SUCLG1P53597 346 aaKnown RBP10.89□□□□□ -0.67
CSNK1E-213ENST00000495232 CLDN15P56746 228 aa10.89□□□□□ -0.67
CSNK1E-213ENST00000495232 CLDN20P56880 219 aa10.89□□□□□ -0.67
CSNK1E-213ENST00000495232 PCBP3P57721 371 aaKnown RBP10.89□□□□□ -0.67
CSNK1E-213ENST00000495232 NUP107P57740 925 aa10.89□□□□□ -0.67
CSNK1E-213ENST00000495232 NSUN5P2Q63ZY6 315 aa10.89□□□□□ -0.67
CSNK1E-213ENST00000495232 RTL6Q6ICC9 239 aa10.89□□□□□ -0.67
CSNK1E-213ENST00000495232 WBP2NLQ6ICG8 309 aa10.89□□□□□ -0.67
CSNK1E-213ENST00000495232 XKRXQ6PP77 449 aa10.89□□□□□ -0.67
CSNK1E-213ENST00000495232 C16orf89Q6UX73 402 aa10.89□□□□□ -0.67
CSNK1E-213ENST00000495232 CLEC18BQ6UXF7 455 aa10.89□□□□□ -0.67
CSNK1E-213ENST00000495232 ESPNLQ6ZVH7 1005 aa10.89□□□□□ -0.67
CSNK1E-213ENST00000495232 PLEKHM3Q6ZWE6 761 aa10.89□□□□□ -0.67
CSNK1E-213ENST00000495232 MICU2Q8IYU8 434 aa10.89□□□□□ -0.67
CSNK1E-213ENST00000495232 CADM2Q8N3J6 435 aa10.89□□□□□ -0.67
CSNK1E-213ENST00000495232 RPRMLQ8N4K4 120 aa10.89□□□□□ -0.67
CSNK1E-213ENST00000495232 ZNF808Q8N4W9 903 aaPredicted RBP10.89□□□□□ -0.67
CSNK1E-213ENST00000495232 CLEC18CQ8NCF0 446 aa10.89□□□□□ -0.67
CSNK1E-213ENST00000495232 CA5BP1Q8WTZ4 195 aa10.89□□□□□ -0.67
CSNK1E-213ENST00000495232 NSL1Q96IY1 281 aa10.89□□□□□ -0.67
CSNK1E-213ENST00000495232 KLHL15Q96M94 604 aa10.89□□□□□ -0.67
CSNK1E-213ENST00000495232 NPAS1Q99742 590 aa10.89□□□□□ -0.67
CSNK1E-213ENST00000495232 TM9SF2Q99805 663 aa10.89□□□□□ -0.67
CSNK1E-213ENST00000495232 KCTD14Q9BQ13 255 aaPredicted RBP10.89□□□□□ -0.67
CSNK1E-213ENST00000495232 PRRG4Q9BZD6 226 aa10.89□□□□□ -0.67
CSNK1E-213ENST00000495232 ALG2Q9H553 416 aa10.89□□□□□ -0.67
CSNK1E-213ENST00000495232 CMTM6Q9NX76 183 aa10.89□□□□□ -0.67
CSNK1E-213ENST00000495232 FAM215AQ9Y5M1 114 aa10.89□□□□□ -0.67
CSNK1E-213ENST00000495232 PHF3Q92576 2039 aaKnown RBP10.89□□□□□ -0.67
CSNK1E-213ENST00000495232 MED12Q93074 2177 aa10.89□□□□□ -0.67
CSNK1E-213ENST00000495232 WIPF3A6NGB9 483 aa10.88□□□□□ -0.67
CSNK1E-213ENST00000495232 SLC22A20A6NK97 555 aa10.88□□□□□ -0.67
CSNK1E-213ENST00000495232 HSPB2A8KAH6 182 aa10.88□□□□□ -0.67
CSNK1E-213ENST00000495232 H0YC42 278 aa10.88□□□□□ -0.67
CSNK1E-213ENST00000495232 ETV2O00321 342 aaPredicted RBP10.88□□□□□ -0.67
CSNK1E-213ENST00000495232 NME4O00746 187 aa10.88□□□□□ -0.67
CSNK1E-213ENST00000495232 TNFSF11O14788 317 aa10.88□□□□□ -0.67
CSNK1E-213ENST00000495232 FRS3O43559 492 aa10.88□□□□□ -0.67
CSNK1E-213ENST00000495232 SYNGR4O95473 234 aa10.88□□□□□ -0.67
CSNK1E-213ENST00000495232 NTN1O95631 604 aa10.88□□□□□ -0.67
CSNK1E-213ENST00000495232 OPN1SWP03999 348 aa10.88□□□□□ -0.67
CSNK1E-213ENST00000495232 TFPIP10646 304 aa10.88□□□□□ -0.67
CSNK1E-213ENST00000495232 AGAP20933 346 aa10.88□□□□□ -0.67
CSNK1E-213ENST00000495232 CALB2P22676 271 aa10.88□□□□□ -0.67
CSNK1E-213ENST00000495232 CXCR1P25024 350 aa10.88□□□□□ -0.67
CSNK1E-213ENST00000495232 CHRNB4P30926 498 aa10.88□□□□□ -0.67
CSNK1E-213ENST00000495232 TIMP3P35625 211 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms