RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 HEPHL1Q6MZM0 1159 aa8.55□□□□□ -1.04
MSH5-218ENST00000494646 ZNF621Q6ZSS3 439 aa8.55□□□□□ -1.04
MSH5-218ENST00000494646 Q71RC1 249 aaPredicted RBP8.55□□□□□ -1.04
MSH5-218ENST00000494646 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.55□□□□□ -1.04
MSH5-218ENST00000494646 STK32CQ86UX6 486 aa8.55□□□□□ -1.04
MSH5-218ENST00000494646 CXorf67Q86X51 503 aaPredicted RBP8.55□□□□□ -1.04
MSH5-218ENST00000494646 P3H2Q8IVL5 708 aa8.55□□□□□ -1.04
MSH5-218ENST00000494646 ZFP90Q8TF47 636 aa8.55□□□□□ -1.04
MSH5-218ENST00000494646 CPNE4Q96A23 557 aaPredicted RBP8.55□□□□□ -1.04
MSH5-218ENST00000494646 ROPN1LQ96C74 230 aa8.55□□□□□ -1.04
MSH5-218ENST00000494646 MARK4Q96L34 752 aa8.55□□□□□ -1.04
MSH5-218ENST00000494646 MRGPRX4Q96LA9 322 aa8.55□□□□□ -1.04
MSH5-218ENST00000494646 OR5B2Q96R09 309 aa8.55□□□□□ -1.04
MSH5-218ENST00000494646 SMR3AQ99954 134 aa8.55□□□□□ -1.04
MSH5-218ENST00000494646 SLC35A5Q9BS91 424 aa8.55□□□□□ -1.04
MSH5-218ENST00000494646 INPP5KQ9BT40 448 aa8.55□□□□□ -1.04
MSH5-218ENST00000494646 COQ10BQ9H8M1 238 aa8.55□□□□□ -1.04
MSH5-218ENST00000494646 MEAF6Q9HAF1 191 aa8.55□□□□□ -1.04
MSH5-218ENST00000494646 HAO1Q9UJM8 370 aa8.55□□□□□ -1.04
MSH5-218ENST00000494646 WDR45Q9Y484 360 aa8.55□□□□□ -1.04
MSH5-218ENST00000494646 RAI1Q7Z5J4 1906 aaPredicted RBP8.54□□□□□ -1.04
MSH5-218ENST00000494646 NAV3Q8IVL0 2385 aa8.54□□□□□ -1.04
MSH5-218ENST00000494646 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.54□□□□□ -1.04
MSH5-218ENST00000494646 TMEM120BA0PK00 339 aa8.54□□□□□ -1.04
MSH5-218ENST00000494646 CCDC154A6NI56 674 aa8.54□□□□□ -1.04
MSH5-218ENST00000494646 CLDN24A6NM45 220 aa8.54□□□□□ -1.04
MSH5-218ENST00000494646 GJE1A6NN92 205 aa8.54□□□□□ -1.04
MSH5-218ENST00000494646 BCAS1O75363 584 aaPredicted RBP8.54□□□□□ -1.04
MSH5-218ENST00000494646 SNUPNO95149 360 aaKnown RBP8.54□□□□□ -1.04
MSH5-218ENST00000494646 H6PDO95479 791 aa8.54□□□□□ -1.04
MSH5-218ENST00000494646 AK1P00568 194 aa8.54□□□□□ -1.04
MSH5-218ENST00000494646 ADAP00813 363 aa8.54□□□□□ -1.04
MSH5-218ENST00000494646 YES1P07947 543 aa8.54□□□□□ -1.04
MSH5-218ENST00000494646 NID1P14543 1247 aa8.54□□□□□ -1.04
MSH5-218ENST00000494646 PGCP20142 388 aa8.54□□□□□ -1.04
MSH5-218ENST00000494646 CCNA2P20248 432 aa8.54□□□□□ -1.04
MSH5-218ENST00000494646 ELK4P28324 431 aa8.54□□□□□ -1.04
MSH5-218ENST00000494646 CDKN2CP42773 168 aa8.54□□□□□ -1.04
MSH5-218ENST00000494646 CLNS1AP54105 237 aaKnown RBP8.54□□□□□ -1.04
MSH5-218ENST00000494646 SUMO3P55854 103 aaPredicted RBP8.54□□□□□ -1.04
MSH5-218ENST00000494646 SESN3P58005 492 aa8.54□□□□□ -1.04
MSH5-218ENST00000494646 RASGEF1BQ0VAM2 473 aa8.54□□□□□ -1.04
MSH5-218ENST00000494646 MERTKQ12866 999 aa8.54□□□□□ -1.04
MSH5-218ENST00000494646 SYPL1Q16563 259 aa8.54□□□□□ -1.04
MSH5-218ENST00000494646 SLC25A53Q5H9E4 307 aa8.54□□□□□ -1.04
MSH5-218ENST00000494646 SAXO2Q658L1 398 aa8.54□□□□□ -1.04
MSH5-218ENST00000494646 EIF3MQ7L2H7 374 aaKnown RBP8.54□□□□□ -1.04
MSH5-218ENST00000494646 CROCCP2Q86T23 111 aa8.54□□□□□ -1.04
MSH5-218ENST00000494646 RNF130Q86XS8 419 aa8.54□□□□□ -1.04
MSH5-218ENST00000494646 ZNF619Q8N2I2 560 aa8.54□□□□□ -1.04
MSH5-218ENST00000494646 ZNF563Q8TA94 476 aa8.54□□□□□ -1.04
MSH5-218ENST00000494646 RNF128Q8TEB7 428 aa8.54□□□□□ -1.04
MSH5-218ENST00000494646 TESCQ96BS2 214 aa8.54□□□□□ -1.04
MSH5-218ENST00000494646 S100PBPQ96BU1 408 aa8.54□□□□□ -1.04
MSH5-218ENST00000494646 NEURL3Q96EH8 262 aa8.54□□□□□ -1.04
MSH5-218ENST00000494646 PLPPR2Q96GM1 343 aa8.54□□□□□ -1.04
MSH5-218ENST00000494646 ACTR6Q9GZN1 396 aa8.54□□□□□ -1.04
MSH5-218ENST00000494646 NMUR2Q9GZQ4 415 aa8.54□□□□□ -1.04
MSH5-218ENST00000494646 ZNF350Q9GZX5 532 aa8.54□□□□□ -1.04
MSH5-218ENST00000494646 FANCFQ9NPI8 374 aa8.54□□□□□ -1.04
MSH5-218ENST00000494646 SERINC1Q9NRX5 453 aa8.54□□□□□ -1.04
MSH5-218ENST00000494646 AIG1Q9NVV5 245 aa8.54□□□□□ -1.04
MSH5-218ENST00000494646 THAP1Q9NVV9 213 aa8.54□□□□□ -1.04
MSH5-218ENST00000494646 BEX4Q9NWD9 120 aaPredicted RBP8.54□□□□□ -1.04
MSH5-218ENST00000494646 EGFL7Q9UHF1 273 aa8.54□□□□□ -1.04
MSH5-218ENST00000494646 GPR52Q9Y2T5 361 aa8.54□□□□□ -1.04
MSH5-218ENST00000494646 USF3Q68DE3 2245 aa8.54□□□□□ -1.04
MSH5-218ENST00000494646 CADP27708 2225 aa8.53□□□□□ -1.04
MSH5-218ENST00000494646 ZNF814B7Z6K7 855 aa8.53□□□□□ -1.04
MSH5-218ENST00000494646 E9PBE3 544 aa8.53□□□□□ -1.04
MSH5-218ENST00000494646 HMGN4O00479 90 aa8.53□□□□□ -1.04
MSH5-218ENST00000494646 SMPD2O60906 423 aa8.53□□□□□ -1.04
MSH5-218ENST00000494646 SNNO75324 88 aaPredicted RBP8.53□□□□□ -1.04
MSH5-218ENST00000494646 AGR2O95994 175 aa8.53□□□□□ -1.04
MSH5-218ENST00000494646 PGRP06401 933 aa8.53□□□□□ -1.04
MSH5-218ENST00000494646 TFPIP10646 304 aa8.53□□□□□ -1.04
MSH5-218ENST00000494646 PPP3CBP16298 524 aa8.53□□□□□ -1.04
MSH5-218ENST00000494646 FPR1P21462 350 aa8.53□□□□□ -1.04
MSH5-218ENST00000494646 PGM1P36871 562 aa8.53□□□□□ -1.04
MSH5-218ENST00000494646 RAC3P60763 192 aa8.53□□□□□ -1.04
MSH5-218ENST00000494646 MAGOHP61326 146 aaKnown RBP8.53□□□□□ -1.04
MSH5-218ENST00000494646 KCNJ10P78508 379 aa8.53□□□□□ -1.04
MSH5-218ENST00000494646 FUT5Q11128 374 aa8.53□□□□□ -1.04
MSH5-218ENST00000494646 SELENBP1Q13228 472 aa8.53□□□□□ -1.04
MSH5-218ENST00000494646 SKP2Q13309 424 aa8.53□□□□□ -1.04
MSH5-218ENST00000494646 RNPS1Q15287 305 aaKnown RBP8.53□□□□□ -1.04
MSH5-218ENST00000494646 SLC9B1Q4ZJI4 515 aa8.53□□□□□ -1.04
MSH5-218ENST00000494646 BEX5Q5H9J7 111 aa8.53□□□□□ -1.04
MSH5-218ENST00000494646 COX20Q5RI15 118 aa8.53□□□□□ -1.04
MSH5-218ENST00000494646 SFRP5Q5T4F7 317 aa8.53□□□□□ -1.04
MSH5-218ENST00000494646 FRRS1Q6ZNA5 592 aa8.53□□□□□ -1.04
MSH5-218ENST00000494646 PLEKHM3Q6ZWE6 761 aa8.53□□□□□ -1.04
MSH5-218ENST00000494646 SPATA19Q7Z5L4 167 aa8.53□□□□□ -1.04
MSH5-218ENST00000494646 KRTAP1-3Q8IUG1 177 aa8.53□□□□□ -1.04
MSH5-218ENST00000494646 ANKFN1Q8N957 763 aa8.53□□□□□ -1.04
MSH5-218ENST00000494646 PNPT1Q8TCS8 783 aaKnown RBP8.53□□□□□ -1.04
MSH5-218ENST00000494646 MIPOL1Q8TD10 442 aa8.53□□□□□ -1.04
MSH5-218ENST00000494646 TMEM234Q8WY98 164 aa8.53□□□□□ -1.04
MSH5-218ENST00000494646 CNOT9Q92600 299 aaKnown RBP8.53□□□□□ -1.04
MSH5-218ENST00000494646 PIGTQ969N2 578 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms