RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 UBTFL6P0CB48 400 aaPredicted RBP8.52□□□□□ -1.05
UBR4-216ENST00000494503 LAMP1P11279 417 aa8.52□□□□□ -1.05
UBR4-216ENST00000494503 BCKDHAP12694 445 aa8.52□□□□□ -1.05
UBR4-216ENST00000494503 KRT4P19013 534 aa8.52□□□□□ -1.05
UBR4-216ENST00000494503 IGHV1-2P23083 117 aa8.52□□□□□ -1.05
UBR4-216ENST00000494503 PRPH2P23942 346 aa8.52□□□□□ -1.05
UBR4-216ENST00000494503 OR3A2P47893 321 aa8.52□□□□□ -1.05
UBR4-216ENST00000494503 FABP6P51161 128 aa8.52□□□□□ -1.05
UBR4-216ENST00000494503 ATP12AP54707 1039 aa8.52□□□□□ -1.05
UBR4-216ENST00000494503 RAC3P60763 192 aa8.52□□□□□ -1.05
UBR4-216ENST00000494503 SPOCK1Q08629 439 aa8.52□□□□□ -1.05
UBR4-216ENST00000494503 MERTKQ12866 999 aa8.52□□□□□ -1.05
UBR4-216ENST00000494503 PDE7AQ13946 482 aa8.52□□□□□ -1.05
UBR4-216ENST00000494503 PTGR1Q14914 329 aa8.52□□□□□ -1.05
UBR4-216ENST00000494503 CARTPTQ16568 116 aa8.52□□□□□ -1.05
UBR4-216ENST00000494503 PGS1Q32NB8 556 aa8.52□□□□□ -1.05
UBR4-216ENST00000494503 LSM12Q3MHD2 195 aaKnown RBP8.52□□□□□ -1.05
UBR4-216ENST00000494503 ATP6AP1LQ52LC2 224 aa8.52□□□□□ -1.05
UBR4-216ENST00000494503 KLHL26Q53HC5 615 aa8.52□□□□□ -1.05
UBR4-216ENST00000494503 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.52□□□□□ -1.05
UBR4-216ENST00000494503 PDZK1Q5T2W1 519 aa8.52□□□□□ -1.05
UBR4-216ENST00000494503 C9orf135Q5VTT2 229 aa8.52□□□□□ -1.05
UBR4-216ENST00000494503 KANK2Q63ZY3 851 aa8.52□□□□□ -1.05
UBR4-216ENST00000494503 KLHL17Q6TDP4 642 aa8.52□□□□□ -1.05
UBR4-216ENST00000494503 Q6ZSR9 355 aa8.52□□□□□ -1.05
UBR4-216ENST00000494503 C16orf62Q7Z3J2 963 aa8.52□□□□□ -1.05
UBR4-216ENST00000494503 GALNT5Q7Z7M9 940 aa8.52□□□□□ -1.05
UBR4-216ENST00000494503 FNDC5Q8NAU1 212 aa8.52□□□□□ -1.05
UBR4-216ENST00000494503 OR5W2Q8NH69 310 aa8.52□□□□□ -1.05
UBR4-216ENST00000494503 ZNF563Q8TA94 476 aa8.52□□□□□ -1.05
UBR4-216ENST00000494503 GPR119Q8TDV5 335 aa8.52□□□□□ -1.05
UBR4-216ENST00000494503 HOXB13Q92826 284 aaPredicted RBP8.52□□□□□ -1.05
UBR4-216ENST00000494503 APH1AQ96BI3 265 aa8.52□□□□□ -1.05
UBR4-216ENST00000494503 MTERF3Q96E29 417 aa8.52□□□□□ -1.05
UBR4-216ENST00000494503 ZHX1-C8orf76Q96EF9 292 aa8.52□□□□□ -1.05
UBR4-216ENST00000494503 ZNF764Q96H86 408 aaPredicted RBP8.52□□□□□ -1.05
UBR4-216ENST00000494503 RADILQ96JH8 1075 aa8.52□□□□□ -1.05
UBR4-216ENST00000494503 OR7D2Q96RA2 312 aa8.52□□□□□ -1.05
UBR4-216ENST00000494503 PRPF18Q99633 342 aaKnown RBP8.52□□□□□ -1.05
UBR4-216ENST00000494503 THUMPD3Q9BV44 507 aaKnown RBP8.52□□□□□ -1.05
UBR4-216ENST00000494503 C1QTNF6Q9BXI9 259 aa8.52□□□□□ -1.05
UBR4-216ENST00000494503 TUBB1Q9H4B7 451 aa8.52□□□□□ -1.05
UBR4-216ENST00000494503 GP6Q9HCN6 339 aa8.52□□□□□ -1.05
UBR4-216ENST00000494503 SIRT3Q9NTG7 399 aaPredicted RBP8.52□□□□□ -1.05
UBR4-216ENST00000494503 EMC3Q9P0I2 261 aa8.52□□□□□ -1.05
UBR4-216ENST00000494503 ICAM5Q9UMF0 924 aa8.52□□□□□ -1.05
UBR4-216ENST00000494503 B3GALT5Q9Y2C3 310 aa8.52□□□□□ -1.05
UBR4-216ENST00000494503 NOSIPQ9Y314 301 aaKnown RBP8.52□□□□□ -1.05
UBR4-216ENST00000494503 DNAJC15Q9Y5T4 150 aa8.52□□□□□ -1.05
UBR4-216ENST00000494503 KCNE3Q9Y6H6 103 aa8.52□□□□□ -1.05
UBR4-216ENST00000494503 SHISA9B4DS77 424 aa8.51□□□□□ -1.05
UBR4-216ENST00000494503 SMAD9O15198 467 aaKnown RBP8.51□□□□□ -1.05
UBR4-216ENST00000494503 TBX19O60806 448 aa8.51□□□□□ -1.05
UBR4-216ENST00000494503 SLU7O95391 586 aaKnown RBP8.51□□□□□ -1.05
UBR4-216ENST00000494503 H6PDO95479 791 aa8.51□□□□□ -1.05
UBR4-216ENST00000494503 CSTAP01040 98 aa8.51□□□□□ -1.05
UBR4-216ENST00000494503 SHBGP04278 402 aa8.51□□□□□ -1.05
UBR4-216ENST00000494503 CHRNGP07510 517 aa8.51□□□□□ -1.05
UBR4-216ENST00000494503 DHRS4L1P0CG22 281 aa8.51□□□□□ -1.05
UBR4-216ENST00000494503 ZNF16P17020 682 aaPredicted RBP8.51□□□□□ -1.05
UBR4-216ENST00000494503 CCNA2P20248 432 aa8.51□□□□□ -1.05
UBR4-216ENST00000494503 EDNRAP25101 427 aa8.51□□□□□ -1.05
UBR4-216ENST00000494503 RYKP34925 604 aa8.51□□□□□ -1.05
UBR4-216ENST00000494503 CRHR1P34998 444 aa8.51□□□□□ -1.05
UBR4-216ENST00000494503 FRKP42685 505 aaPredicted RBP8.51□□□□□ -1.05
UBR4-216ENST00000494503 DIO1P49895 249 aa8.51□□□□□ -1.05
UBR4-216ENST00000494503 CASP9P55211 416 aa8.51□□□□□ -1.05
UBR4-216ENST00000494503 CSNK2A1P68400 391 aaPredicted RBP8.51□□□□□ -1.05
UBR4-216ENST00000494503 IRX1P78414 480 aaPredicted RBP8.51□□□□□ -1.05
UBR4-216ENST00000494503 PCLAFQ15004 111 aa8.51□□□□□ -1.05
UBR4-216ENST00000494503 TMEM249Q2WGJ8 235 aa8.51□□□□□ -1.05
UBR4-216ENST00000494503 TIMM23BQ5SRD1 257 aa8.51□□□□□ -1.05
UBR4-216ENST00000494503 C6orf52Q5T4I8 152 aa8.51□□□□□ -1.05
UBR4-216ENST00000494503 BHLHB9Q6PI77 547 aa8.51□□□□□ -1.05
UBR4-216ENST00000494503 OLIG3Q7RTU3 272 aa8.51□□□□□ -1.05
UBR4-216ENST00000494503 MUC15Q8N387 334 aa8.51□□□□□ -1.05
UBR4-216ENST00000494503 ZNF525Q8N782 197 aa8.51□□□□□ -1.05
UBR4-216ENST00000494503 EPS8L3Q8TE67 593 aaKnown RBP8.51□□□□□ -1.05
UBR4-216ENST00000494503 MZB1Q8WU39 189 aa8.51□□□□□ -1.05
UBR4-216ENST00000494503 TMEM234Q8WY98 164 aa8.51□□□□□ -1.05
UBR4-216ENST00000494503 OR5P2Q8WZ92 322 aa8.51□□□□□ -1.05
UBR4-216ENST00000494503 FAM168AQ92567 244 aa8.51□□□□□ -1.05
UBR4-216ENST00000494503 C3orf49Q96BT1 292 aa8.51□□□□□ -1.05
UBR4-216ENST00000494503 PPP3R2Q96LZ3 170 aa8.51□□□□□ -1.05
UBR4-216ENST00000494503 GATA5Q9BWX5 397 aaPredicted RBP8.51□□□□□ -1.05
UBR4-216ENST00000494503 AMBRA1Q9C0C7 1298 aa8.51□□□□□ -1.05
UBR4-216ENST00000494503 SHARPINQ9H0F6 387 aa8.51□□□□□ -1.05
UBR4-216ENST00000494503 CHODLQ9H9P2 273 aa8.51□□□□□ -1.05
UBR4-216ENST00000494503 BCO1Q9HAY6 547 aa8.51□□□□□ -1.05
UBR4-216ENST00000494503 EML4Q9HC35 981 aaKnown RBP8.51□□□□□ -1.05
UBR4-216ENST00000494503 NPAP1Q9NZP6 1156 aa8.51□□□□□ -1.05
UBR4-216ENST00000494503 NTMQ9P121 344 aa8.51□□□□□ -1.05
UBR4-216ENST00000494503 CDC42EP3Q9UKI2 254 aa8.51□□□□□ -1.05
UBR4-216ENST00000494503 TRAF6Q9Y4K3 522 aa8.51□□□□□ -1.05
UBR4-216ENST00000494503 ACTL7BQ9Y614 415 aa8.51□□□□□ -1.05
UBR4-216ENST00000494503 ATP23Q9Y6H3 246 aa8.51□□□□□ -1.05
UBR4-216ENST00000494503 TLDC2A0PJX2 215 aa8.5□□□□□ -1.05
UBR4-216ENST00000494503 SERINC4A6NH21 518 aa8.5□□□□□ -1.05
UBR4-216ENST00000494503 OR5H1A6NKK0 313 aa8.5□□□□□ -1.05
UBR4-216ENST00000494503 NPIPB8E9PQR5 432 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms