RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 PDSS1Q5T2R2 415 aa11.25□□□□□ -0.61
TRA2A-209ENST00000494255 CLEC18BQ6UXF7 455 aa11.25□□□□□ -0.61
TRA2A-209ENST00000494255 RPTNQ6XPR3 784 aa11.25□□□□□ -0.61
TRA2A-209ENST00000494255 LACC1Q8IV20 430 aa11.25□□□□□ -0.61
TRA2A-209ENST00000494255 CLEC18CQ8NCF0 446 aa11.25□□□□□ -0.61
TRA2A-209ENST00000494255 RASSF5Q8WWW0 418 aa11.25□□□□□ -0.61
TRA2A-209ENST00000494255 RND1Q92730 232 aa11.25□□□□□ -0.61
TRA2A-209ENST00000494255 NSL1Q96IY1 281 aa11.25□□□□□ -0.61
TRA2A-209ENST00000494255 TRIB1Q96RU8 372 aa11.25□□□□□ -0.61
TRA2A-209ENST00000494255 TUBA1CQ9BQE3 449 aa11.25□□□□□ -0.61
TRA2A-209ENST00000494255 TMEM185BQ9H7F4 350 aa11.25□□□□□ -0.61
TRA2A-209ENST00000494255 EVA1AQ9H8M9 152 aa11.25□□□□□ -0.61
TRA2A-209ENST00000494255 SPAG4Q9NPE6 437 aa11.25□□□□□ -0.61
TRA2A-209ENST00000494255 ADA2Q9NZK5 511 aa11.25□□□□□ -0.61
TRA2A-209ENST00000494255 FAM215AQ9Y5M1 114 aa11.25□□□□□ -0.61
TRA2A-209ENST00000494255 PHF3Q92576 2039 aaKnown RBP11.24□□□□□ -0.61
TRA2A-209ENST00000494255 ETV2O00321 342 aaPredicted RBP11.24□□□□□ -0.61
TRA2A-209ENST00000494255 NME4O00746 187 aa11.24□□□□□ -0.61
TRA2A-209ENST00000494255 GSTA4O15217 222 aa11.24□□□□□ -0.61
TRA2A-209ENST00000494255 ZG16O60844 167 aa11.24□□□□□ -0.61
TRA2A-209ENST00000494255 NTN1O95631 604 aa11.24□□□□□ -0.61
TRA2A-209ENST00000494255 EPPINO95925 133 aa11.24□□□□□ -0.61
TRA2A-209ENST00000494255 LDLRP01130 860 aa11.24□□□□□ -0.61
TRA2A-209ENST00000494255 OPN1SWP03999 348 aa11.24□□□□□ -0.61
TRA2A-209ENST00000494255 APOBEC1P41238 236 aaKnown RBP11.24□□□□□ -0.61
TRA2A-209ENST00000494255 CLDN20P56880 219 aa11.24□□□□□ -0.61
TRA2A-209ENST00000494255 NUP107P57740 925 aa11.24□□□□□ -0.61
TRA2A-209ENST00000494255 NCALDP61601 193 aa11.24□□□□□ -0.61
TRA2A-209ENST00000494255 DMTNQ08495 405 aa11.24□□□□□ -0.61
TRA2A-209ENST00000494255 PMPCAQ10713 525 aa11.24□□□□□ -0.61
TRA2A-209ENST00000494255 NSUN5P2Q63ZY6 315 aa11.24□□□□□ -0.61
TRA2A-209ENST00000494255 RTL6Q6ICC9 239 aa11.24□□□□□ -0.61
TRA2A-209ENST00000494255 C3orf33Q6P1S2 294 aa11.24□□□□□ -0.61
TRA2A-209ENST00000494255 POMZP3Q6PJE2 187 aa11.24□□□□□ -0.61
TRA2A-209ENST00000494255 C16orf89Q6UX73 402 aa11.24□□□□□ -0.61
TRA2A-209ENST00000494255 NCCRP1Q6ZVX7 275 aaPredicted RBP11.24□□□□□ -0.61
TRA2A-209ENST00000494255 PLEKHM3Q6ZWE6 761 aa11.24□□□□□ -0.61
TRA2A-209ENST00000494255 CCDC80Q76M96 950 aa11.24□□□□□ -0.61
TRA2A-209ENST00000494255 GRINAQ7Z429 371 aa11.24□□□□□ -0.61
TRA2A-209ENST00000494255 PGAM4Q8N0Y7 254 aa11.24□□□□□ -0.61
TRA2A-209ENST00000494255 LILRA2Q8N149 483 aa11.24□□□□□ -0.61
TRA2A-209ENST00000494255 RPRMLQ8N4K4 120 aa11.24□□□□□ -0.61
TRA2A-209ENST00000494255 SMYD1Q8NB12 490 aa11.24□□□□□ -0.61
TRA2A-209ENST00000494255 ATP6V1C2Q8NEY4 427 aa11.24□□□□□ -0.61
TRA2A-209ENST00000494255 TNIP2Q8NFZ5 429 aa11.24□□□□□ -0.61
TRA2A-209ENST00000494255 OR10Q1Q8NGQ4 319 aa11.24□□□□□ -0.61
TRA2A-209ENST00000494255 KCTD14Q9BQ13 255 aaPredicted RBP11.24□□□□□ -0.61
TRA2A-209ENST00000494255 TTYH2Q9BSA4 534 aa11.24□□□□□ -0.61
TRA2A-209ENST00000494255 ALG2Q9H553 416 aa11.24□□□□□ -0.61
TRA2A-209ENST00000494255 CALHM2Q9HA72 323 aa11.24□□□□□ -0.61
TRA2A-209ENST00000494255 USP22Q9UPT9 525 aa11.24□□□□□ -0.61
TRA2A-209ENST00000494255 SPIN1Q9Y657 262 aaPredicted RBP11.24□□□□□ -0.61
TRA2A-209ENST00000494255 SPENQ96T58 3664 aaKnown RBP11.24□□□□□ -0.61
TRA2A-209ENST00000494255 HIVEP3Q5T1R4 2406 aa11.24□□□□□ -0.61
TRA2A-209ENST00000494255 CD8B2A6NJW9 211 aa11.24□□□□□ -0.61
TRA2A-209ENST00000494255 CLCA1A8K7I4 914 aa11.24□□□□□ -0.61
TRA2A-209ENST00000494255 EIF1AYO14602 144 aaKnown RBP11.24□□□□□ -0.61
TRA2A-209ENST00000494255 TPST1O60507 370 aa11.24□□□□□ -0.61
TRA2A-209ENST00000494255 ADAM11O75078 769 aa11.24□□□□□ -0.61
TRA2A-209ENST00000494255 GCM2O75603 506 aaPredicted RBP11.24□□□□□ -0.61
TRA2A-209ENST00000494255 OPN1LWP04000 364 aa11.24□□□□□ -0.61
TRA2A-209ENST00000494255 GLI4P10075 376 aa11.24□□□□□ -0.61
TRA2A-209ENST00000494255 IL11P20809 199 aa11.24□□□□□ -0.61
TRA2A-209ENST00000494255 SLC7A1P30825 629 aa11.24□□□□□ -0.61
TRA2A-209ENST00000494255 SFTPDP35247 375 aa11.24□□□□□ -0.61
TRA2A-209ENST00000494255 ACAA2P42765 397 aaKnown RBP11.24□□□□□ -0.61
TRA2A-209ENST00000494255 SLC1A3P43003 542 aa11.24□□□□□ -0.61
TRA2A-209ENST00000494255 GSK3BP49841 420 aa11.24□□□□□ -0.61
TRA2A-209ENST00000494255 POLR2HP52434 150 aaKnown RBP11.24□□□□□ -0.61
TRA2A-209ENST00000494255 CLDN15P56746 228 aa11.24□□□□□ -0.61
TRA2A-209ENST00000494255 RGS8P57771 180 aaPredicted RBP11.24□□□□□ -0.61
TRA2A-209ENST00000494255 SGCBQ16585 318 aa11.24□□□□□ -0.61
TRA2A-209ENST00000494255 ESPNLQ6ZVH7 1005 aa11.24□□□□□ -0.61
TRA2A-209ENST00000494255 TRPM8Q7Z2W7 1104 aa11.24□□□□□ -0.61
TRA2A-209ENST00000494255 CADM2Q8N3J6 435 aa11.24□□□□□ -0.61
TRA2A-209ENST00000494255 MARVELD2Q8N4S9 558 aa11.24□□□□□ -0.61
TRA2A-209ENST00000494255 ZNF524Q96C55 264 aa11.24□□□□□ -0.61
TRA2A-209ENST00000494255 KLHL15Q96M94 604 aa11.24□□□□□ -0.61
TRA2A-209ENST00000494255 PAQR5Q9NXK6 330 aaPredicted RBP11.24□□□□□ -0.61
TRA2A-209ENST00000494255 COQ3Q9NZJ6 369 aa11.24□□□□□ -0.61
TRA2A-209ENST00000494255 ABCD2Q9UBJ2 740 aa11.24□□□□□ -0.61
TRA2A-209ENST00000494255 RPS6KB2Q9UBS0 482 aa11.24□□□□□ -0.61
TRA2A-209ENST00000494255 CHST2Q9Y4C5 530 aa11.24□□□□□ -0.61
TRA2A-209ENST00000494255 ARHGAP21Q5T5U3 1957 aa11.23□□□□□ -0.61
TRA2A-209ENST00000494255 SYT5O00445 386 aa11.23□□□□□ -0.61
TRA2A-209ENST00000494255 TNFSF11O14788 317 aa11.23□□□□□ -0.61
TRA2A-209ENST00000494255 FRS3O43559 492 aa11.23□□□□□ -0.61
TRA2A-209ENST00000494255 IL2RAP01589 272 aa11.23□□□□□ -0.61
TRA2A-209ENST00000494255 C8BP07358 591 aa11.23□□□□□ -0.61
TRA2A-209ENST00000494255 PRG2P13727 222 aa11.23□□□□□ -0.61
TRA2A-209ENST00000494255 CALB2P22676 271 aa11.23□□□□□ -0.61
TRA2A-209ENST00000494255 TACR3P29371 465 aa11.23□□□□□ -0.61
TRA2A-209ENST00000494255 EIF1AXP47813 144 aaKnown RBP11.23□□□□□ -0.61
TRA2A-209ENST00000494255 SUCLG1P53597 346 aaKnown RBP11.23□□□□□ -0.61
TRA2A-209ENST00000494255 DLX5P56178 289 aa11.23□□□□□ -0.61
TRA2A-209ENST00000494255 ADORA2A-AS1P86434 159 aa11.23□□□□□ -0.61
TRA2A-209ENST00000494255 SLC25A3Q00325 362 aa11.23□□□□□ -0.61
TRA2A-209ENST00000494255 TMEM176BQ3YBM2 270 aaPredicted RBP11.23□□□□□ -0.61
TRA2A-209ENST00000494255 GLIPR1L2Q4G1C9 344 aa11.23□□□□□ -0.61
TRA2A-209ENST00000494255 LRRC23Q53EV4 343 aaPredicted RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms