RNA–Protein interactions for RNA: ENST00000494248.1

PTPN12-212, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 470 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-212ENST00000494248 MSH3P20585 1137 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 BGNP21810 368 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 HRH2P25021 359 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 CD82P27701 267 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 HSD11B1P28845 292 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 ALDH3A1P30838 453 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 GTF2H1P32780 548 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 MAS1LP35410 378 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 UGT1A5P35504 534 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 CYLC1P35663 651 aaPredicted RBP1.96□□□□□ -2.1
PTPN12-212ENST00000494248 SLC1A2P43004 574 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 GYG1P46976 350 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 MRPL19P49406 292 aaKnown RBP1.96□□□□□ -2.1
PTPN12-212ENST00000494248 STK19P49842 368 aaPredicted RBP1.96□□□□□ -2.1
PTPN12-212ENST00000494248 GNG10P50151 68 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 METAP2P50579 478 aaKnown RBP eCLIP1.96□□□□□ -2.1
PTPN12-212ENST00000494248 DUSP3P51452 185 aaPredicted RBP1.96□□□□□ -2.1
PTPN12-212ENST00000494248 CCR8P51685 355 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 PLA2G16P53816 162 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 ATP5J2P56134 94 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 MAZP56270 477 aaKnown RBP1.96□□□□□ -2.1
PTPN12-212ENST00000494248 RIPK4P57078 832 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 NUP107P57740 925 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 OR2B6P58173 313 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 RAB4BP61018 213 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 ATP6V0D1P61421 351 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 ARF6P62330 175 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 HERVK_113P63132 956 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 ERVK-8P63133 956 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 OGDHQ02218 1023 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 GABPAQ06546 454 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 FAM27E3Q08E93 113 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 UBE2V1Q13404 147 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 ORC2Q13416 577 aaPredicted RBP1.96□□□□□ -2.1
PTPN12-212ENST00000494248 MED21Q13503 144 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 CDH18Q13634 790 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 EXOSC2Q13868 293 aaKnown RBP1.96□□□□□ -2.1
PTPN12-212ENST00000494248 GK3PQ14409 553 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 EXOSC7Q15024 291 aaKnown RBP1.96□□□□□ -2.1
PTPN12-212ENST00000494248 CYTH1Q15438 398 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 PPP1R3AQ16821 1122 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 KNOP1Q1ED39 458 aaKnown RBP1.96□□□□□ -2.1
PTPN12-212ENST00000494248 C5orf64Q2M2E5 130 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 QRICH1Q2TAL8 776 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 NDUFAF6Q330K2 333 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 ACTBL2Q562R1 376 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 SYT14P1Q58G82 188 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 ARMCX4Q5H9R4 360 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 CELF3Q5SZQ8 465 aaKnown RBP1.96□□□□□ -2.1
PTPN12-212ENST00000494248 SLX4IPQ5VYV7 408 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 STUMQ69YW2 141 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 OR52W1Q6IF63 320 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 LCN10Q6JVE6 187 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 CES5AQ6NT32 575 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 DUS1LQ6P1R4 473 aaKnown RBP1.96□□□□□ -2.1
PTPN12-212ENST00000494248 GCNT7Q6ZNI0 430 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 ZNF534Q76KX8 674 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 DPY19L4Q7Z388 723 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 CPEB2Q7Z5Q1 589 aaKnown RBP1.96□□□□□ -2.1
PTPN12-212ENST00000494248 TAC4Q86UU9 113 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 SLC51BQ86UW2 128 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 TRIM69Q86WT6 500 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 ZFAND4Q86XD8 727 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 CATSPERDQ86XM0 798 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 CROCCP3Q8IVE0 287 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 GID4Q8IVV7 300 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 GPALPP1Q8IXQ4 340 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 ZNF100Q8IYN0 542 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 SLC38A6Q8IZM9 456 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 CLDN19Q8N6F1 224 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 EMC1Q8N766 993 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 BMPERQ8N8U9 685 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 ZNF441Q8N8Z8 693 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 CNBD1Q8NA66 436 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 MFSD9Q8NBP5 474 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 SLC38A9Q8NBW4 561 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 CCDC197Q8NCU1 140 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 OR4C15Q8NGM1 316 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 OR4D5Q8NGN0 318 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 OR5M1Q8NGP8 315 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 NUBPLQ8TB37 319 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 TMEM239Q8WW34 195 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 PIH1D2Q8WWB5 315 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 IRGQQ8WZA9 623 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 PSMG2Q969U7 264 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 MYLPFQ96A32 169 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 C10orf35Q96D05 121 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 MRPL53Q96EL3 112 aaKnown RBP1.96□□□□□ -2.1
PTPN12-212ENST00000494248 SCRN2Q96FV2 425 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 CPB2Q96IY4 423 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 DNAJC1Q96KC8 554 aaKnown RBP1.96□□□□□ -2.1
PTPN12-212ENST00000494248 B3GALT6Q96L58 329 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 JSRP1Q96MG2 331 aaPredicted RBP1.96□□□□□ -2.1
PTPN12-212ENST00000494248 OPALINQ96PE5 141 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 IL4I1Q96RQ9 567 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 GFI1Q99684 422 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 P2RY13Q9BPV8 354 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 HSD17B14Q9BPX1 270 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 FUNDC2Q9BWH2 189 aa1.96□□□□□ -2.1
PTPN12-212ENST00000494248 RAB11FIP5Q9BXF6 653 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms