RNA–Protein interactions for RNA: ENST00000493468.6

PRPF40A-211, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-211ENST00000493468 FRKP42685 505 aaPredicted RBP12.45□□□□□ -0.42
PRPF40A-211ENST00000493468 PRKAG1P54619 331 aa12.45□□□□□ -0.42
PRPF40A-211ENST00000493468 CDH15P55291 814 aa12.45□□□□□ -0.42
PRPF40A-211ENST00000493468 ACTG1P63261 375 aa12.45□□□□□ -0.42
PRPF40A-211ENST00000493468 CSNK2A1P68400 391 aaPredicted RBP12.45□□□□□ -0.42
PRPF40A-211ENST00000493468 POU6F2P78424 691 aaPredicted RBP12.45□□□□□ -0.42
PRPF40A-211ENST00000493468 LCP2Q13094 533 aa12.45□□□□□ -0.42
PRPF40A-211ENST00000493468 SCGB2A2Q13296 93 aa12.45□□□□□ -0.42
PRPF40A-211ENST00000493468 CARTPTQ16568 116 aa12.45□□□□□ -0.42
PRPF40A-211ENST00000493468 KLHL26Q53HC5 615 aa12.45□□□□□ -0.42
PRPF40A-211ENST00000493468 SPDYAQ5MJ70 313 aa12.45□□□□□ -0.42
PRPF40A-211ENST00000493468 ZDHHC24Q6UX98 284 aa12.45□□□□□ -0.42
PRPF40A-211ENST00000493468 WDR31Q8NA23 367 aa12.45□□□□□ -0.42
PRPF40A-211ENST00000493468 FBXO30Q8TB52 745 aa12.45□□□□□ -0.42
PRPF40A-211ENST00000493468 TMEM237Q96Q45 408 aa12.45□□□□□ -0.42
PRPF40A-211ENST00000493468 STACQ99469 402 aa12.45□□□□□ -0.42
PRPF40A-211ENST00000493468 DUSP22Q9NRW4 184 aa12.45□□□□□ -0.42
PRPF40A-211ENST00000493468 GIN1Q9NXP7 522 aa12.45□□□□□ -0.42
PRPF40A-211ENST00000493468 DCTN4Q9UJW0 460 aa12.45□□□□□ -0.42
PRPF40A-211ENST00000493468 FBXO9Q9UK97 447 aaPredicted RBP12.45□□□□□ -0.42
PRPF40A-211ENST00000493468 CARD8Q9Y2G2 431 aa12.45□□□□□ -0.42
PRPF40A-211ENST00000493468 NOSIPQ9Y314 301 aaKnown RBP12.45□□□□□ -0.42
PRPF40A-211ENST00000493468 TRRAPQ9Y4A5 3859 aa12.44□□□□□ -0.42
PRPF40A-211ENST00000493468 LRP5LA4QPB2 252 aa12.44□□□□□ -0.42
PRPF40A-211ENST00000493468 ZNF716A6NP11 495 aa12.44□□□□□ -0.42
PRPF40A-211ENST00000493468 GPR171O14626 319 aa12.44□□□□□ -0.42
PRPF40A-211ENST00000493468 TBX19O60806 448 aa12.44□□□□□ -0.42
PRPF40A-211ENST00000493468 PDE5AO76074 875 aa12.44□□□□□ -0.42
PRPF40A-211ENST00000493468 PHBP35232 272 aa12.44□□□□□ -0.42
PRPF40A-211ENST00000493468 DIO1P49895 249 aa12.44□□□□□ -0.42
PRPF40A-211ENST00000493468 SERPINB9P50453 376 aa12.44□□□□□ -0.42
PRPF40A-211ENST00000493468 SLC16A1P53985 500 aa12.44□□□□□ -0.42
PRPF40A-211ENST00000493468 DVL1P1P54792 670 aaPredicted RBP12.44□□□□□ -0.42
PRPF40A-211ENST00000493468 PRR31Q5SQ13 230 aa12.44□□□□□ -0.42
PRPF40A-211ENST00000493468 CCNJQ5T5M9 372 aa12.44□□□□□ -0.42
PRPF40A-211ENST00000493468 TMPPEQ6ZT21 453 aa12.44□□□□□ -0.42
PRPF40A-211ENST00000493468 SLC46A3Q7Z3Q1 461 aa12.44□□□□□ -0.42
PRPF40A-211ENST00000493468 TOR1AIP2Q8NFQ8 470 aa12.44□□□□□ -0.42
PRPF40A-211ENST00000493468 METTL2AQ96IZ6 378 aaKnown RBP12.44□□□□□ -0.42
PRPF40A-211ENST00000493468 OR5B2Q96R09 309 aa12.44□□□□□ -0.42
PRPF40A-211ENST00000493468 NAPGQ99747 312 aaPredicted RBP12.44□□□□□ -0.42
PRPF40A-211ENST00000493468 FUT8Q9BYC5 575 aa12.44□□□□□ -0.42
PRPF40A-211ENST00000493468 SLC17A5Q9NRA2 495 aa12.44□□□□□ -0.42
PRPF40A-211ENST00000493468 UTP11Q9Y3A2 253 aaKnown RBP12.44□□□□□ -0.42
PRPF40A-211ENST00000493468 POLR3HQ9Y535 204 aaPredicted RBP12.44□□□□□ -0.42
PRPF40A-211ENST00000493468 TIMM22Q9Y584 194 aa12.44□□□□□ -0.42
PRPF40A-211ENST00000493468 B9A039 149 aa12.43□□□□□ -0.42
PRPF40A-211ENST00000493468 EIF4E2O60573 245 aaKnown RBP12.43□□□□□ -0.42
PRPF40A-211ENST00000493468 DNAJA2O60884 412 aa12.43□□□□□ -0.42
PRPF40A-211ENST00000493468 LILRA1O75019 489 aa12.43□□□□□ -0.42
PRPF40A-211ENST00000493468 RSL1D1O76021 490 aaKnown RBP12.43□□□□□ -0.42
PRPF40A-211ENST00000493468 STAMBPO95630 424 aa12.43□□□□□ -0.42
PRPF40A-211ENST00000493468 INHBAP08476 426 aa12.43□□□□□ -0.42
PRPF40A-211ENST00000493468 TAC1P20366 129 aa12.43□□□□□ -0.42
PRPF40A-211ENST00000493468 IMPDH1P20839 514 aa12.43□□□□□ -0.42
PRPF40A-211ENST00000493468 ATP6V1C1P21283 382 aa12.43□□□□□ -0.42
PRPF40A-211ENST00000493468 APEX1P27695 318 aaKnown RBP12.43□□□□□ -0.42
PRPF40A-211ENST00000493468 IL2RGP31785 369 aa12.43□□□□□ -0.42
PRPF40A-211ENST00000493468 PPOXP50336 477 aa12.43□□□□□ -0.42
PRPF40A-211ENST00000493468 SLC25A3Q00325 362 aa12.43□□□□□ -0.42
PRPF40A-211ENST00000493468 MLC1Q15049 377 aa12.43□□□□□ -0.42
PRPF40A-211ENST00000493468 QPRTQ15274 297 aa12.43□□□□□ -0.42
PRPF40A-211ENST00000493468 EFNB3Q15768 340 aa12.43□□□□□ -0.42
PRPF40A-211ENST00000493468 PDLIM3Q53GG5 364 aaPredicted RBP12.43□□□□□ -0.42
PRPF40A-211ENST00000493468 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.43□□□□□ -0.42
PRPF40A-211ENST00000493468 NOXRED1Q6NXP6 359 aa12.43□□□□□ -0.42
PRPF40A-211ENST00000493468 SZRD1Q7Z422 152 aa12.43□□□□□ -0.42
PRPF40A-211ENST00000493468 TRIM46Q7Z4K8 759 aa12.43□□□□□ -0.42
PRPF40A-211ENST00000493468 MTDHQ86UE4 582 aaKnown RBP12.43□□□□□ -0.42
PRPF40A-211ENST00000493468 ANKS4BQ8N8V4 417 aa12.43□□□□□ -0.42
PRPF40A-211ENST00000493468 OR5W2Q8NH69 310 aa12.43□□□□□ -0.42
PRPF40A-211ENST00000493468 FAM216AQ8WUB2 273 aa12.43□□□□□ -0.42
PRPF40A-211ENST00000493468 SLC25A43Q8WUT9 341 aaPredicted RBP12.43□□□□□ -0.42
PRPF40A-211ENST00000493468 CIDECQ96AQ7 238 aaPredicted RBP12.43□□□□□ -0.42
PRPF40A-211ENST00000493468 ZNF524Q96C55 264 aa12.43□□□□□ -0.42
PRPF40A-211ENST00000493468 KCNA7Q96RP8 456 aa12.43□□□□□ -0.42
PRPF40A-211ENST00000493468 C1QTNF6Q9BXI9 259 aa12.43□□□□□ -0.42
PRPF40A-211ENST00000493468 SAP130Q9H0E3 1048 aa12.43□□□□□ -0.42
PRPF40A-211ENST00000493468 RAB17Q9H0T7 212 aa12.43□□□□□ -0.42
PRPF40A-211ENST00000493468 PIGUQ9H490 435 aa12.43□□□□□ -0.42
PRPF40A-211ENST00000493468 OCEL1Q9H607 264 aa12.43□□□□□ -0.42
PRPF40A-211ENST00000493468 ACSS1Q9NUB1 689 aaPredicted RBP12.43□□□□□ -0.42
PRPF40A-211ENST00000493468 NPIPA5A0A0B4J1W7 369 aa12.42□□□□□ -0.42
PRPF40A-211ENST00000493468 ESPNB1AK53 854 aa12.42□□□□□ -0.42
PRPF40A-211ENST00000493468 NPIPA7E9PJI5 369 aa12.42□□□□□ -0.42
PRPF40A-211ENST00000493468 NPIPB8E9PQR5 432 aa12.42□□□□□ -0.42
PRPF40A-211ENST00000493468 NPIPB9F8W1W9 429 aa12.42□□□□□ -0.42
PRPF40A-211ENST00000493468 DNPH1O43598 174 aa12.42□□□□□ -0.42
PRPF40A-211ENST00000493468 MRPL33O75394 65 aaKnown RBP12.42□□□□□ -0.42
PRPF40A-211ENST00000493468 SNUPNO95149 360 aaKnown RBP12.42□□□□□ -0.42
PRPF40A-211ENST00000493468 NPIPA8P0DM63 369 aa12.42□□□□□ -0.42
PRPF40A-211ENST00000493468 SERPINF1P36955 418 aa12.42□□□□□ -0.42
PRPF40A-211ENST00000493468 CBFBQ13951 182 aa12.42□□□□□ -0.42
PRPF40A-211ENST00000493468 IMPG1Q17R60 797 aa12.42□□□□□ -0.42
PRPF40A-211ENST00000493468 TIGD2Q4W5G0 525 aa12.42□□□□□ -0.42
PRPF40A-211ENST00000493468 SYT14P1Q58G82 188 aa12.42□□□□□ -0.42
PRPF40A-211ENST00000493468 LRIG3Q6UXM1 1119 aa12.42□□□□□ -0.42
PRPF40A-211ENST00000493468 PIGXQ8TBF5 258 aa12.42□□□□□ -0.42
PRPF40A-211ENST00000493468 ST8SIA1Q92185 356 aa12.42□□□□□ -0.42
PRPF40A-211ENST00000493468 GCDHQ92947 438 aaPredicted RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms