RNA–Protein interactions for RNA: ENST00000491552.1

MSH5-SAPCD1-206, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

TSL 3

Gene MSH5-SAPCD1, Length 706 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-206ENST00000491552 ESPNLQ6ZVH7 1005 aa14.65□□□□□ -0.06
MSH5-SAPCD1-206ENST00000491552 P4HA3Q7Z4N8 544 aa14.65□□□□□ -0.06
MSH5-SAPCD1-206ENST00000491552 NET1Q7Z628 596 aaPredicted RBP14.65□□□□□ -0.06
MSH5-SAPCD1-206ENST00000491552 SERPINA11Q86U17 422 aa14.65□□□□□ -0.06
MSH5-SAPCD1-206ENST00000491552 KRT73Q86Y46 540 aa14.65□□□□□ -0.06
MSH5-SAPCD1-206ENST00000491552 PTOV1Q86YD1 416 aa14.65□□□□□ -0.06
MSH5-SAPCD1-206ENST00000491552 LILRA2Q8N149 483 aa14.65□□□□□ -0.06
MSH5-SAPCD1-206ENST00000491552 LILRB4Q8NHJ6 448 aa14.65□□□□□ -0.06
MSH5-SAPCD1-206ENST00000491552 RCN3Q96D15 328 aa14.65□□□□□ -0.06
MSH5-SAPCD1-206ENST00000491552 ADGRG7Q96K78 797 aa14.65□□□□□ -0.06
MSH5-SAPCD1-206ENST00000491552 KLHL15Q96M94 604 aa14.65□□□□□ -0.06
MSH5-SAPCD1-206ENST00000491552 ZFP3Q96NJ6 502 aa14.65□□□□□ -0.06
MSH5-SAPCD1-206ENST00000491552 TM9SF2Q99805 663 aa14.65□□□□□ -0.06
MSH5-SAPCD1-206ENST00000491552 PINK1Q9BXM7 581 aa14.65□□□□□ -0.06
MSH5-SAPCD1-206ENST00000491552 NANOGQ9H9S0 305 aa14.65□□□□□ -0.06
MSH5-SAPCD1-206ENST00000491552 RLIMQ9NVW2 624 aa14.65□□□□□ -0.06
MSH5-SAPCD1-206ENST00000491552 DOPEY1Q5JWR5 2465 aa14.65□□□□□ -0.06
MSH5-SAPCD1-206ENST00000491552 LRRK2Q5S007 2527 aa14.64□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 KIAA1549Q9HCM3 1950 aa14.64□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 CFAP73A6NFT4 308 aa14.64□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 SLC22A20A6NK97 555 aa14.64□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 GJE1A6NN92 205 aa14.64□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 FAM90A27PA6NNH2 459 aa14.64□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 FAAHO00519 579 aa14.64□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 AP3D1O14617 1153 aa14.64□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 TNFSF11O14788 317 aa14.64□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 UQCRBP14927 111 aa14.64□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 SFTPDP35247 375 aa14.64□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 EIF1AXP47813 144 aaKnown RBP14.64□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 IDH2P48735 452 aaKnown RBP14.64□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 DLX5P56178 289 aa14.64□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 MERTKQ12866 999 aa14.64□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 EPS8Q12929 822 aa14.64□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 SGCBQ16585 318 aa14.64□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 CTU2Q2VPK5 515 aaKnown RBP14.64□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 RABL3Q5HYI8 236 aa14.64□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 PDSS1Q5T2R2 415 aa14.64□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 C3orf33Q6P1S2 294 aa14.64□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 PLEKHM3Q6ZWE6 761 aa14.64□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 PIGWQ7Z7B1 504 aa14.64□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 TREML1Q86YW5 311 aa14.64□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 ZZZ3Q8IYH5 903 aa14.64□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 CLIP4Q8N3C7 705 aa14.64□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 NAXEQ8NCW5 288 aa14.64□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 ATP6V1C2Q8NEY4 427 aa14.64□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 OR10A6Q8NH74 314 aa14.64□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 OR10D3Q8NH80 312 aa14.64□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 OR2V1Q8NHB1 315 aa14.64□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 ZNF845Q96IR2 970 aaPredicted RBP14.64□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 ZNF607Q96SK3 696 aa14.64□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 SPATA5L1Q9BVQ7 753 aa14.64□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 SERINC1Q9NRX5 453 aa14.64□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 PAQR5Q9NXK6 330 aaPredicted RBP14.64□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 ARL2BPQ9Y2Y0 163 aa14.64□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 ZNF175Q9Y473 711 aa14.64□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 A0A0J9YW62 118 aa14.63□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 ADAMDEC1O15204 470 aa14.63□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 EFNA2O43921 213 aa14.63□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 RCBTB2O95199 551 aa14.63□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 TGM6O95932 706 aa14.63□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 GKN3PP0CG01 181 aa14.63□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 TMIGD3P0DMS9 266 aaPredicted RBP14.63□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 SHC1P29353 583 aa14.63□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 AQP1P29972 269 aa14.63□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 PRKAR1BP31321 381 aa14.63□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 APOBEC1P41238 236 aaKnown RBP14.63□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 ZNF136P52737 540 aa14.63□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 PON3Q15166 354 aa14.63□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 SLC25A35Q3KQZ1 300 aa14.63□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 HBMQ6B0K9 141 aa14.63□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 POMZP3Q6PJE2 187 aa14.63□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 DHRS4L2Q6PKH6 230 aa14.63□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 ZNF550Q7Z398 422 aa14.63□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 GRINAQ7Z429 371 aa14.63□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 LIX1LQ8IVB5 337 aa14.63□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 SLC30A8Q8IWU4 369 aa14.63□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 FIG4Q92562 907 aa14.63□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 ECSITQ9BQ95 431 aa14.63□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 UCK2Q9BZX2 261 aa14.63□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 CTPS2Q9NRF8 586 aa14.63□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 CHST2Q9Y4C5 530 aa14.63□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 HEATR5AQ86XA9 2040 aa14.63□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 NKX2-6A6NCS4 301 aa14.62□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 PRORSD1PA6NEY8 169 aa14.62□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 DVL2O14641 736 aa14.62□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 CXCL13O43927 109 aa14.62□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 BMP5P22003 454 aa14.62□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 CTSSP25774 331 aa14.62□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 GRNP28799 593 aaKnown RBP14.62□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 PRDX6P30041 224 aa14.62□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 PCGF2P35227 344 aa14.62□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 GZMMP51124 257 aa14.62□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 PCBP3P57721 371 aaKnown RBP14.62□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 TMEM176BQ3YBM2 270 aaPredicted RBP14.62□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 PPP4R4Q6NUP7 873 aa14.62□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 CALHM3Q86XJ0 350 aa14.62□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 FNDC9Q8TBE3 224 aa14.62□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 SLC25A43Q8WUT9 341 aaPredicted RBP14.62□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 CMTM5Q96DZ9 223 aa14.62□□□□□ -0.07
MSH5-SAPCD1-206ENST00000491552 PIF1Q9H611 641 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms