RNA–Protein interactions for RNA: ENST00000491402.5

VCPKMT-204, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,793 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-204ENST00000491402 WBP2NLQ6ICG8 309 aa19.77■□□□□ 0.76
VCPKMT-204ENST00000491402 ZADH2Q8N4Q0 377 aa19.77■□□□□ 0.76
VCPKMT-204ENST00000491402 TMEM178AQ8NBL3 297 aa19.77■□□□□ 0.76
VCPKMT-204ENST00000491402 PIK3C3Q8NEB9 887 aa19.77■□□□□ 0.76
VCPKMT-204ENST00000491402 OR52J3Q8NH60 311 aa19.77■□□□□ 0.76
VCPKMT-204ENST00000491402 C9orf43Q8TAL5 461 aaPredicted RBP19.77■□□□□ 0.76
VCPKMT-204ENST00000491402 GNRHR2Q96P88 292 aa19.77■□□□□ 0.76
VCPKMT-204ENST00000491402 ACER3Q9NUN7 267 aa19.77■□□□□ 0.76
VCPKMT-204ENST00000491402 TUBA8Q9NY65 449 aaPredicted RBP19.77■□□□□ 0.76
VCPKMT-204ENST00000491402 TUBD1Q9UJT1 453 aa19.77■□□□□ 0.76
VCPKMT-204ENST00000491402 SAMHD1Q9Y3Z3 626 aaKnown RBP19.77■□□□□ 0.76
VCPKMT-204ENST00000491402 LYVE1Q9Y5Y7 322 aa19.77■□□□□ 0.76
VCPKMT-204ENST00000491402 A0A1B0GWA3 101 aa19.76■□□□□ 0.75
VCPKMT-204ENST00000491402 PINLYPA6NC86 204 aa19.76■□□□□ 0.75
VCPKMT-204ENST00000491402 LRRC3CA6NJW4 275 aa19.76■□□□□ 0.75
VCPKMT-204ENST00000491402 PEX1O43933 1283 aa19.76■□□□□ 0.75
VCPKMT-204ENST00000491402 CDC40O60508 579 aaKnown RBP eCLIP19.76■□□□□ 0.75
VCPKMT-204ENST00000491402 GADD45GO95257 159 aa19.76■□□□□ 0.75
VCPKMT-204ENST00000491402 H1F0P07305 194 aaKnown RBP19.76■□□□□ 0.75
VCPKMT-204ENST00000491402 IST1P53990 364 aa19.76■□□□□ 0.75
VCPKMT-204ENST00000491402 ST3GAL3Q11203 375 aa19.76■□□□□ 0.75
VCPKMT-204ENST00000491402 FOXO1Q12778 655 aa19.76■□□□□ 0.75
VCPKMT-204ENST00000491402 FOXD4Q12950 439 aaPredicted RBP19.76■□□□□ 0.75
VCPKMT-204ENST00000491402 PPP1R8Q12972 351 aaKnown RBP19.76■□□□□ 0.75
VCPKMT-204ENST00000491402 QPRTQ15274 297 aa19.76■□□□□ 0.75
VCPKMT-204ENST00000491402 ARSKQ6UWY0 536 aa19.76■□□□□ 0.75
VCPKMT-204ENST00000491402 GDF7Q7Z4P5 450 aa19.76■□□□□ 0.75
VCPKMT-204ENST00000491402 SLC41A3Q96GZ6 507 aa19.76■□□□□ 0.75
VCPKMT-204ENST00000491402 PTGES2Q9H7Z7 377 aa19.76■□□□□ 0.75
VCPKMT-204ENST00000491402 MAN2C1Q9NTJ4 1040 aa19.76■□□□□ 0.75
VCPKMT-204ENST00000491402 SLC7A7Q9UM01 511 aa19.76■□□□□ 0.75
VCPKMT-204ENST00000491402 BOKQ9UMX3 212 aaPredicted RBP19.76■□□□□ 0.75
VCPKMT-204ENST00000491402 PCDHGB7Q9Y5F8 929 aa19.76■□□□□ 0.75
VCPKMT-204ENST00000491402 NCKAP5O14513 1909 aa19.76■□□□□ 0.75
VCPKMT-204ENST00000491402 A0A1W2PRQ8 180 aa19.75■□□□□ 0.75
VCPKMT-204ENST00000491402 SLC34A1Q06495 639 aa19.75■□□□□ 0.75
VCPKMT-204ENST00000491402 DGCR6Q14129 220 aa19.75■□□□□ 0.75
VCPKMT-204ENST00000491402 ALG10BQ5I7T1 473 aa19.75■□□□□ 0.75
VCPKMT-204ENST00000491402 ASB18Q6ZVZ8 466 aa19.75■□□□□ 0.75
VCPKMT-204ENST00000491402 C1GALT1C1Q96EU7 318 aa19.75■□□□□ 0.75
VCPKMT-204ENST00000491402 TAS2R10Q9NYW0 307 aa19.75■□□□□ 0.75
VCPKMT-204ENST00000491402 RPS6KB2Q9UBS0 482 aa19.75■□□□□ 0.75
VCPKMT-204ENST00000491402 VDAC3Q9Y277 283 aa19.75■□□□□ 0.75
VCPKMT-204ENST00000491402 FREM3P0C091 2139 aa19.75■□□□□ 0.75
VCPKMT-204ENST00000491402 TRAV17A0A0B4J275 112 aa19.75■□□□□ 0.75
VCPKMT-204ENST00000491402 KLRC4-KLRK1H3BQV0 150 aa19.75■□□□□ 0.75
VCPKMT-204ENST00000491402 E2F6O75461 281 aa19.75■□□□□ 0.75
VCPKMT-204ENST00000491402 THRBP10828 461 aa19.75■□□□□ 0.75
VCPKMT-204ENST00000491402 SLC1A3P43003 542 aa19.75■□□□□ 0.75
VCPKMT-204ENST00000491402 ZNF41P51814 821 aaPredicted RBP19.75■□□□□ 0.75
VCPKMT-204ENST00000491402 ULK3Q6PHR2 472 aa19.75■□□□□ 0.75
VCPKMT-204ENST00000491402 ICA1LQ8NDH6 482 aa19.75■□□□□ 0.75
VCPKMT-204ENST00000491402 C3orf49Q96BT1 292 aa19.75■□□□□ 0.75
VCPKMT-204ENST00000491402 EPYCQ99645 322 aa19.75■□□□□ 0.75
VCPKMT-204ENST00000491402 ZFP64Q9NPA5 681 aa19.75■□□□□ 0.75
VCPKMT-204ENST00000491402 MED17Q9NVC6 651 aa19.75■□□□□ 0.75
VCPKMT-204ENST00000491402 PCDHGB6Q9Y5F9 930 aa19.75■□□□□ 0.75
VCPKMT-204ENST00000491402 TRBV4-1A0A0J9YWV2 114 aa19.74■□□□□ 0.75
VCPKMT-204ENST00000491402 TNFRSF11BO00300 401 aa19.74■□□□□ 0.75
VCPKMT-204ENST00000491402 CHP2O43745 196 aa19.74■□□□□ 0.75
VCPKMT-204ENST00000491402 CBR3O75828 277 aa19.74■□□□□ 0.75
VCPKMT-204ENST00000491402 LIMS1P48059 325 aa19.74■□□□□ 0.75
VCPKMT-204ENST00000491402 HMGA2P52926 109 aa19.74■□□□□ 0.75
VCPKMT-204ENST00000491402 SMIM11AP58511 58 aa19.74■□□□□ 0.75
VCPKMT-204ENST00000491402 PLPPR5Q32ZL2 321 aa19.74■□□□□ 0.75
VCPKMT-204ENST00000491402 FGD3Q5JSP0 725 aa19.74■□□□□ 0.75
VCPKMT-204ENST00000491402 OR4C15Q8NGM1 316 aa19.74■□□□□ 0.75
VCPKMT-204ENST00000491402 DNAJA4Q8WW22 397 aaPredicted RBP19.74■□□□□ 0.75
VCPKMT-204ENST00000491402 PRDM4Q9UKN5 801 aa19.74■□□□□ 0.75
VCPKMT-204ENST00000491402 LYPD3O95274 346 aa19.73■□□□□ 0.75
VCPKMT-204ENST00000491402 ZNF23P17027 643 aa19.73■□□□□ 0.75
VCPKMT-204ENST00000491402 PRKCAP17252 672 aa19.73■□□□□ 0.75
VCPKMT-204ENST00000491402 DNAJA1P31689 397 aaKnown RBP19.73■□□□□ 0.75
VCPKMT-204ENST00000491402 MEOX1P50221 254 aa19.73■□□□□ 0.75
VCPKMT-204ENST00000491402 TRAM2Q15035 370 aa19.73■□□□□ 0.75
VCPKMT-204ENST00000491402 SWT1Q5T5J6 900 aaKnown RBP19.73■□□□□ 0.75
VCPKMT-204ENST00000491402 TMEM179BQ7Z7N9 219 aa19.73■□□□□ 0.75
VCPKMT-204ENST00000491402 RNF217Q8TC41 542 aa19.73■□□□□ 0.75
VCPKMT-204ENST00000491402 SLC7A13Q8TCU3 470 aa19.73■□□□□ 0.75
VCPKMT-204ENST00000491402 TMEM234Q8WY98 164 aa19.73■□□□□ 0.75
VCPKMT-204ENST00000491402 ST8SIA1Q92185 356 aa19.73■□□□□ 0.75
VCPKMT-204ENST00000491402 SLC39A7Q92504 469 aa19.73■□□□□ 0.75
VCPKMT-204ENST00000491402 ANKRD19PQ9H560 264 aa19.73■□□□□ 0.75
VCPKMT-204ENST00000491402 SELENONQ9NZV5 590 aa19.73■□□□□ 0.75
VCPKMT-204ENST00000491402 OAZ3Q9UMX2 235 aa19.73■□□□□ 0.75
VCPKMT-204ENST00000491402 C15orf41Q9Y2V0 281 aa19.73■□□□□ 0.75
VCPKMT-204ENST00000491402 MPDZO75970 2070 aa19.73■□□□□ 0.75
VCPKMT-204ENST00000491402 RFPL3SP0C7P2 107 aa19.72■□□□□ 0.75
VCPKMT-204ENST00000491402 GP1BBP13224 206 aa19.72■□□□□ 0.75
VCPKMT-204ENST00000491402 DSCR4P56555 118 aaPredicted RBP19.72■□□□□ 0.75
VCPKMT-204ENST00000491402 TRIP10Q15642 601 aa19.72■□□□□ 0.75
VCPKMT-204ENST00000491402 EXOC3L2Q2M3D2 409 aa19.72■□□□□ 0.75
VCPKMT-204ENST00000491402 WDR88Q6ZMY6 472 aa19.72■□□□□ 0.75
VCPKMT-204ENST00000491402 GRINAQ7Z429 371 aa19.72■□□□□ 0.75
VCPKMT-204ENST00000491402 EPHX4Q8IUS5 362 aa19.72■□□□□ 0.75
VCPKMT-204ENST00000491402 NKAIN4Q8IVV8 208 aa19.72■□□□□ 0.75
VCPKMT-204ENST00000491402 SLC38A4Q969I6 547 aa19.72■□□□□ 0.75
VCPKMT-204ENST00000491402 ALPK1Q96QP1 1244 aa19.72■□□□□ 0.75
VCPKMT-204ENST00000491402 PRSS27Q9BQR3 290 aa19.72■□□□□ 0.75
VCPKMT-204ENST00000491402 FUZQ9BT04 418 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms