RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 CCDC154A6NI56 674 aa16.03■□□□□ 0.16
HMGN1-219ENST00000491183 HMGN4O00479 90 aa16.03■□□□□ 0.16
HMGN1-219ENST00000491183 PRKD3O94806 890 aa16.03■□□□□ 0.16
HMGN1-219ENST00000491183 H6PDO95479 791 aa16.03■□□□□ 0.16
HMGN1-219ENST00000491183 HOXC12P31275 282 aa16.03■□□□□ 0.16
HMGN1-219ENST00000491183 CHI3L1P36222 383 aaPredicted RBP16.03■□□□□ 0.16
HMGN1-219ENST00000491183 CDKN2CP42773 168 aa16.03■□□□□ 0.16
HMGN1-219ENST00000491183 RAC3P60763 192 aa16.03■□□□□ 0.16
HMGN1-219ENST00000491183 PPP2R2AP63151 447 aa16.03■□□□□ 0.16
HMGN1-219ENST00000491183 PLAURQ03405 335 aa16.03■□□□□ 0.16
HMGN1-219ENST00000491183 CHRNEQ04844 493 aa16.03■□□□□ 0.16
HMGN1-219ENST00000491183 RNPS1Q15287 305 aaKnown RBP16.03■□□□□ 0.16
HMGN1-219ENST00000491183 BEND6Q5SZJ8 279 aaPredicted RBP16.03■□□□□ 0.16
HMGN1-219ENST00000491183 EIF3MQ7L2H7 374 aaKnown RBP16.03■□□□□ 0.16
HMGN1-219ENST00000491183 FCRLAQ7L513 359 aa16.03■□□□□ 0.16
HMGN1-219ENST00000491183 KRTAP1-3Q8IUG1 177 aa16.03■□□□□ 0.16
HMGN1-219ENST00000491183 ZNF619Q8N2I2 560 aa16.03■□□□□ 0.16
HMGN1-219ENST00000491183 FAM71CQ8NEG0 241 aa16.03■□□□□ 0.16
HMGN1-219ENST00000491183 WFDC11Q8NEX6 87 aa16.03■□□□□ 0.16
HMGN1-219ENST00000491183 ST8SIA1Q92185 356 aa16.03■□□□□ 0.16
HMGN1-219ENST00000491183 REXO5Q96IC2 774 aaKnown RBP16.03■□□□□ 0.16
HMGN1-219ENST00000491183 OR52E6Q96RD3 313 aa16.03■□□□□ 0.16
HMGN1-219ENST00000491183 DLL4Q9NR61 685 aa16.03■□□□□ 0.16
HMGN1-219ENST00000491183 POLE3Q9NRF9 147 aa16.03■□□□□ 0.16
HMGN1-219ENST00000491183 BEX4Q9NWD9 120 aaPredicted RBP16.03■□□□□ 0.16
HMGN1-219ENST00000491183 KLHL13Q9P2N7 655 aa16.03■□□□□ 0.16
HMGN1-219ENST00000491183 ING1Q9UK53 422 aaPredicted RBP16.03■□□□□ 0.16
HMGN1-219ENST00000491183 RAI1Q7Z5J4 1906 aaPredicted RBP16.02■□□□□ 0.16
HMGN1-219ENST00000491183 PGRP06401 933 aa16.02■□□□□ 0.16
HMGN1-219ENST00000491183 PPP3CBP16298 524 aa16.02■□□□□ 0.16
HMGN1-219ENST00000491183 PGCP20142 388 aa16.02■□□□□ 0.16
HMGN1-219ENST00000491183 KHKP50053 298 aa16.02■□□□□ 0.16
HMGN1-219ENST00000491183 ACKR1Q16570 336 aa16.02■□□□□ 0.16
HMGN1-219ENST00000491183 GPAT3Q53EU6 434 aa16.02■□□□□ 0.16
HMGN1-219ENST00000491183 TMEM201Q5SNT2 666 aa16.02■□□□□ 0.16
HMGN1-219ENST00000491183 PLEKHM3Q6ZWE6 761 aa16.02■□□□□ 0.16
HMGN1-219ENST00000491183 MAVSQ7Z434 540 aa16.02■□□□□ 0.16
HMGN1-219ENST00000491183 STK32CQ86UX6 486 aa16.02■□□□□ 0.16
HMGN1-219ENST00000491183 RNF130Q86XS8 419 aa16.02■□□□□ 0.16
HMGN1-219ENST00000491183 ANKFN1Q8N957 763 aa16.02■□□□□ 0.16
HMGN1-219ENST00000491183 OIT3Q8WWZ8 545 aa16.02■□□□□ 0.16
HMGN1-219ENST00000491183 MAELQ96JY0 434 aaKnown RBP16.02■□□□□ 0.16
HMGN1-219ENST00000491183 PANX1Q96RD7 426 aa16.02■□□□□ 0.16
HMGN1-219ENST00000491183 MANSC1Q9H8J5 431 aa16.02■□□□□ 0.16
HMGN1-219ENST00000491183 GP6Q9HCN6 339 aa16.02■□□□□ 0.16
HMGN1-219ENST00000491183 ACER3Q9NUN7 267 aa16.02■□□□□ 0.16
HMGN1-219ENST00000491183 GPR52Q9Y2T5 361 aa16.02■□□□□ 0.16
HMGN1-219ENST00000491183 C2CD3Q4AC94 2353 aa16.01■□□□□ 0.15
HMGN1-219ENST00000491183 CLDN24A6NM45 220 aa16.01■□□□□ 0.15
HMGN1-219ENST00000491183 TRPC5OSA6NMA1 111 aa16.01■□□□□ 0.15
HMGN1-219ENST00000491183 ADAM11O75078 769 aa16.01■□□□□ 0.15
HMGN1-219ENST00000491183 GCM2O75603 506 aaPredicted RBP16.01■□□□□ 0.15
HMGN1-219ENST00000491183 GSNP06396 782 aa16.01■□□□□ 0.15
HMGN1-219ENST00000491183 YES1P07947 543 aa16.01■□□□□ 0.15
HMGN1-219ENST00000491183 PSMB1P20618 241 aaKnown RBP16.01■□□□□ 0.15
HMGN1-219ENST00000491183 SLC7A1P30825 629 aa16.01■□□□□ 0.15
HMGN1-219ENST00000491183 MERTKQ12866 999 aa16.01■□□□□ 0.15
HMGN1-219ENST00000491183 SYPL1Q16563 259 aa16.01■□□□□ 0.15
HMGN1-219ENST00000491183 SLC9B1Q4ZJI4 515 aa16.01■□□□□ 0.15
HMGN1-219ENST00000491183 ATG16L1Q676U5 607 aa16.01■□□□□ 0.15
HMGN1-219ENST00000491183 C3orf33Q6P1S2 294 aa16.01■□□□□ 0.15
HMGN1-219ENST00000491183 TFAP2EQ6VUC0 442 aa16.01■□□□□ 0.15
HMGN1-219ENST00000491183 ZNF621Q6ZSS3 439 aa16.01■□□□□ 0.15
HMGN1-219ENST00000491183 GABRG1Q8N1C3 465 aa16.01■□□□□ 0.15
HMGN1-219ENST00000491183 SLC43A2Q8N370 569 aa16.01■□□□□ 0.15
HMGN1-219ENST00000491183 RAB3IL1Q8TBN0 382 aa16.01■□□□□ 0.15
HMGN1-219ENST00000491183 TMEM234Q8WY98 164 aa16.01■□□□□ 0.15
HMGN1-219ENST00000491183 OR5B2Q96R09 309 aa16.01■□□□□ 0.15
HMGN1-219ENST00000491183 ACTR6Q9GZN1 396 aa16.01■□□□□ 0.15
HMGN1-219ENST00000491183 SLC38A1Q9H2H9 487 aa16.01■□□□□ 0.15
HMGN1-219ENST00000491183 UBTD1Q9HAC8 227 aa16.01■□□□□ 0.15
HMGN1-219ENST00000491183 SLC35A3Q9Y2D2 325 aa16.01■□□□□ 0.15
HMGN1-219ENST00000491183 ACANP16112 2415 aa16.01■□□□□ 0.15
HMGN1-219ENST00000491183 MTORP42345 2549 aa16■□□□□ 0.15
HMGN1-219ENST00000491183 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16■□□□□ 0.15
HMGN1-219ENST00000491183 SLCO1B7G3V0H7 640 aa16■□□□□ 0.15
HMGN1-219ENST00000491183 SMAD9O15198 467 aaKnown RBP16■□□□□ 0.15
HMGN1-219ENST00000491183 DIAPH2O60879 1101 aa16■□□□□ 0.15
HMGN1-219ENST00000491183 KCNJ10P78508 379 aa16■□□□□ 0.15
HMGN1-219ENST00000491183 TSC22D1Q15714 1073 aa16■□□□□ 0.15
HMGN1-219ENST00000491183 COX20Q5RI15 118 aa16■□□□□ 0.15
HMGN1-219ENST00000491183 NXNQ6DKJ4 435 aa16■□□□□ 0.15
HMGN1-219ENST00000491183 CNOT9Q92600 299 aaKnown RBP16■□□□□ 0.15
HMGN1-219ENST00000491183 PSD2Q9BQI7 771 aa16■□□□□ 0.15
HMGN1-219ENST00000491183 CCDC106Q9BWC9 280 aa16■□□□□ 0.15
HMGN1-219ENST00000491183 OR10A4Q9H209 315 aa16■□□□□ 0.15
HMGN1-219ENST00000491183 BCO1Q9HAY6 547 aa16■□□□□ 0.15
HMGN1-219ENST00000491183 FANCFQ9NPI8 374 aa16■□□□□ 0.15
HMGN1-219ENST00000491183 SERINC1Q9NRX5 453 aa16■□□□□ 0.15
HMGN1-219ENST00000491183 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16■□□□□ 0.15
HMGN1-219ENST00000491183 SLC6A13Q9NSD5 602 aa16■□□□□ 0.15
HMGN1-219ENST00000491183 NKIRAS1Q9NYS0 192 aa16■□□□□ 0.15
HMGN1-219ENST00000491183 DSCAMO60469 2012 aa15.99■□□□□ 0.15
HMGN1-219ENST00000491183 ZNF814B7Z6K7 855 aa15.99■□□□□ 0.15
HMGN1-219ENST00000491183 CYTIPO60759 359 aa15.99■□□□□ 0.15
HMGN1-219ENST00000491183 ERLIN1O75477 346 aa15.99■□□□□ 0.15
HMGN1-219ENST00000491183 CHRM4P08173 479 aa15.99■□□□□ 0.15
HMGN1-219ENST00000491183 RYKP34925 604 aa15.99■□□□□ 0.15
HMGN1-219ENST00000491183 NKX6-1P78426 367 aaPredicted RBP15.99■□□□□ 0.15
HMGN1-219ENST00000491183 MAPK11Q15759 364 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms