RNA–Protein interactions for RNA: ENST00000490166.1

RPN1-205, Transcript of ribophorin I, humanhuman

TSL 3

Gene RPN1, Length 573 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-205ENST00000490166 FUT7Q11130 342 aa3.54□□□□□ -1.84
RPN1-205ENST00000490166 FOXF1Q12946 379 aa3.54□□□□□ -1.84
RPN1-205ENST00000490166 GAB1Q13480 694 aa3.54□□□□□ -1.84
RPN1-205ENST00000490166 ESPL1Q14674 2120 aa3.54□□□□□ -1.84
RPN1-205ENST00000490166 TSC22D1Q15714 1073 aa3.54□□□□□ -1.84
RPN1-205ENST00000490166 GPR68Q15743 365 aa3.54□□□□□ -1.84
RPN1-205ENST00000490166 RNF151Q2KHN1 245 aa3.54□□□□□ -1.84
RPN1-205ENST00000490166 GRAMD1BQ3KR37 738 aa3.54□□□□□ -1.84
RPN1-205ENST00000490166 CCDC153Q494R4 210 aa3.54□□□□□ -1.84
RPN1-205ENST00000490166 FAM153CQ494X1 144 aa3.54□□□□□ -1.84
RPN1-205ENST00000490166 GGTA1PQ4G0N0 100 aa3.54□□□□□ -1.84
RPN1-205ENST00000490166 GPAT3Q53EU6 434 aa3.54□□□□□ -1.84
RPN1-205ENST00000490166 ZNF628Q5EBL2 1059 aa3.54□□□□□ -1.84
RPN1-205ENST00000490166 ATAD3BQ5T9A4 648 aa3.54□□□□□ -1.84
RPN1-205ENST00000490166 LCE5AQ5TCM9 118 aa3.54□□□□□ -1.84
RPN1-205ENST00000490166 C9orf135Q5VTT2 229 aa3.54□□□□□ -1.84
RPN1-205ENST00000490166 NOXRED1Q6NXP6 359 aa3.54□□□□□ -1.84
RPN1-205ENST00000490166 KLHL24Q6TFL4 600 aa3.54□□□□□ -1.84
RPN1-205ENST00000490166 LRIG3Q6UXM1 1119 aa3.54□□□□□ -1.84
RPN1-205ENST00000490166 NPSR1Q6W5P4 371 aa3.54□□□□□ -1.84
RPN1-205ENST00000490166 IKBIPQ70UQ0 350 aa3.54□□□□□ -1.84
RPN1-205ENST00000490166 R3HCC1LQ7Z5L2 792 aaKnown RBP3.54□□□□□ -1.84
RPN1-205ENST00000490166 YTHDF3Q7Z739 585 aaKnown RBP3.54□□□□□ -1.84
RPN1-205ENST00000490166 TGIF2LYQ8IUE0 185 aa3.54□□□□□ -1.84
RPN1-205ENST00000490166 C10orf107Q8IVU9 208 aa3.54□□□□□ -1.84
RPN1-205ENST00000490166 ZNF100Q8IYN0 542 aa3.54□□□□□ -1.84
RPN1-205ENST00000490166 WFDC11Q8NEX6 87 aa3.54□□□□□ -1.84
RPN1-205ENST00000490166 B4GALNT2Q8NHY0 566 aa3.54□□□□□ -1.84
RPN1-205ENST00000490166 TWIST2Q8WVJ9 160 aa3.54□□□□□ -1.84
RPN1-205ENST00000490166 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.54□□□□□ -1.84
RPN1-205ENST00000490166 CDS1Q92903 461 aa3.54□□□□□ -1.84
RPN1-205ENST00000490166 HGDQ93099 445 aa3.54□□□□□ -1.84
RPN1-205ENST00000490166 C3orf49Q96BT1 292 aa3.54□□□□□ -1.84
RPN1-205ENST00000490166 ZHX1-C8orf76Q96EF9 292 aa3.54□□□□□ -1.84
RPN1-205ENST00000490166 ARSGQ96EG1 525 aa3.54□□□□□ -1.84
RPN1-205ENST00000490166 C1GALT1C1Q96EU7 318 aa3.54□□□□□ -1.84
RPN1-205ENST00000490166 CNRIP1Q96F85 164 aaPredicted RBP3.54□□□□□ -1.84
RPN1-205ENST00000490166 ZBED6CLQ96FA7 236 aaPredicted RBP3.54□□□□□ -1.84
RPN1-205ENST00000490166 APOPT1Q96IL0 206 aa3.54□□□□□ -1.84
RPN1-205ENST00000490166 PKNOX2Q96KN3 472 aa3.54□□□□□ -1.84
RPN1-205ENST00000490166 OR5B2Q96R09 309 aa3.54□□□□□ -1.84
RPN1-205ENST00000490166 SECISBP2Q96T21 854 aaKnown RBP3.54□□□□□ -1.84
RPN1-205ENST00000490166 ZBTB18Q99592 522 aa3.54□□□□□ -1.84
RPN1-205ENST00000490166 PRPF18Q99633 342 aaKnown RBP3.54□□□□□ -1.84
RPN1-205ENST00000490166 SMR3AQ99954 134 aa3.54□□□□□ -1.84
RPN1-205ENST00000490166 KCNS3Q9BQ31 491 aa3.54□□□□□ -1.84
RPN1-205ENST00000490166 MECRQ9BV79 373 aa3.54□□□□□ -1.84
RPN1-205ENST00000490166 C1QTNF3Q9BXJ4 246 aa3.54□□□□□ -1.84
RPN1-205ENST00000490166 ZNF717Q9BY31 904 aaPredicted RBP3.54□□□□□ -1.84
RPN1-205ENST00000490166 FUT8Q9BYC5 575 aa3.54□□□□□ -1.84
RPN1-205ENST00000490166 KRTAP9-3Q9BYQ3 159 aa3.54□□□□□ -1.84
RPN1-205ENST00000490166 OR2B2Q9GZK3 357 aa3.54□□□□□ -1.84
RPN1-205ENST00000490166 ACTR6Q9GZN1 396 aa3.54□□□□□ -1.84
RPN1-205ENST00000490166 MANSC1Q9H8J5 431 aa3.54□□□□□ -1.84
RPN1-205ENST00000490166 ZBTB26Q9HCK0 441 aa3.54□□□□□ -1.84
RPN1-205ENST00000490166 ACKR4Q9NPB9 350 aa3.54□□□□□ -1.84
RPN1-205ENST00000490166 MYNNQ9NPC7 610 aa3.54□□□□□ -1.84
RPN1-205ENST00000490166 TIGARQ9NQ88 270 aa3.54□□□□□ -1.84
RPN1-205ENST00000490166 ATAD3AQ9NVI7 634 aa3.54□□□□□ -1.84
RPN1-205ENST00000490166 C1orf109Q9NX04 203 aa3.54□□□□□ -1.84
RPN1-205ENST00000490166 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.54□□□□□ -1.84
RPN1-205ENST00000490166 BAIAP2L1Q9UHR4 511 aa3.54□□□□□ -1.84
RPN1-205ENST00000490166 GRID1Q9ULK0 1009 aa3.54□□□□□ -1.84
RPN1-205ENST00000490166 SPTBN1Q01082 2364 aaKnown RBP3.54□□□□□ -1.84
RPN1-205ENST00000490166 RELNP78509 3460 aa3.53□□□□□ -1.84
RPN1-205ENST00000490166 FER1L5A0AVI2 2057 aa3.53□□□□□ -1.84
RPN1-205ENST00000490166 PCM1Q15154 2024 aa3.53□□□□□ -1.84
RPN1-205ENST00000490166 SCN3AQ9NY46 2000 aa3.53□□□□□ -1.84
RPN1-205ENST00000490166 RNF103-CHMP3A0A140T963 221 aa3.53□□□□□ -1.84
RPN1-205ENST00000490166 MBD3L4A6NDZ8 208 aaPredicted RBP3.53□□□□□ -1.84
RPN1-205ENST00000490166 MBD3L3A6NE82 208 aaPredicted RBP3.53□□□□□ -1.84
RPN1-205ENST00000490166 TMEM247A6NEH6 219 aa3.53□□□□□ -1.84
RPN1-205ENST00000490166 MBD3L5A6NJ08 208 aaPredicted RBP3.53□□□□□ -1.84
RPN1-205ENST00000490166 CD8B2A6NJW9 211 aa3.53□□□□□ -1.84
RPN1-205ENST00000490166 GJE1A6NN92 205 aa3.53□□□□□ -1.84
RPN1-205ENST00000490166 M0R1B8 84 aa3.53□□□□□ -1.84
RPN1-205ENST00000490166 TP73O15350 636 aa3.53□□□□□ -1.84
RPN1-205ENST00000490166 SLC16A6O15403 523 aa3.53□□□□□ -1.84
RPN1-205ENST00000490166 EMC8O43402 210 aa3.53□□□□□ -1.84
RPN1-205ENST00000490166 WISP3O95389 354 aaPredicted RBP3.53□□□□□ -1.84
RPN1-205ENST00000490166 C6orf47O95873 294 aa3.53□□□□□ -1.84
RPN1-205ENST00000490166 TGM6O95932 706 aa3.53□□□□□ -1.84
RPN1-205ENST00000490166 IGHV3-9P01782 118 aa3.53□□□□□ -1.84
RPN1-205ENST00000490166 CLPSP04118 112 aa3.53□□□□□ -1.84
RPN1-205ENST00000490166 CHRNGP07510 517 aa3.53□□□□□ -1.84
RPN1-205ENST00000490166 ABHD2P08910 425 aa3.53□□□□□ -1.84
RPN1-205ENST00000490166 UBTFL6P0CB48 400 aaPredicted RBP3.53□□□□□ -1.84
RPN1-205ENST00000490166 KITP10721 976 aa3.53□□□□□ -1.84
RPN1-205ENST00000490166 ACP2P11117 423 aa3.53□□□□□ -1.84
RPN1-205ENST00000490166 UBL4AP11441 157 aa3.53□□□□□ -1.84
RPN1-205ENST00000490166 NAGAP17050 411 aa3.53□□□□□ -1.84
RPN1-205ENST00000490166 NCF2P19878 526 aaPredicted RBP3.53□□□□□ -1.84
RPN1-205ENST00000490166 PTNP21246 168 aa3.53□□□□□ -1.84
RPN1-205ENST00000490166 CHMP24386 653 aa3.53□□□□□ -1.84
RPN1-205ENST00000490166 GALNSP34059 522 aa3.53□□□□□ -1.84
RPN1-205ENST00000490166 GNALP38405 381 aa3.53□□□□□ -1.84
RPN1-205ENST00000490166 RPL3P39023 403 aaKnown RBP3.53□□□□□ -1.84
RPN1-205ENST00000490166 CD79BP40259 229 aa3.53□□□□□ -1.84
RPN1-205ENST00000490166 ASMTP46597 345 aa3.53□□□□□ -1.84
RPN1-205ENST00000490166 CAPZA2P47755 286 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms