RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 PSMG3-AS1Q96PY0 264 aa9.99□□□□□ -0.81
CPSF7-212ENST00000489728 TUBA1CQ9BQE3 449 aa9.99□□□□□ -0.81
CPSF7-212ENST00000489728 GPATCH1Q9BRR8 931 aaKnown RBP9.99□□□□□ -0.81
CPSF7-212ENST00000489728 SLC39A3Q9BRY0 314 aa9.99□□□□□ -0.81
CPSF7-212ENST00000489728 SERINC1Q9NRX5 453 aa9.99□□□□□ -0.81
CPSF7-212ENST00000489728 CLCF1Q9UBD9 225 aa9.99□□□□□ -0.81
CPSF7-212ENST00000489728 KLF2Q9Y5W3 355 aaPredicted RBP9.99□□□□□ -0.81
CPSF7-212ENST00000489728 SPIN1Q9Y657 262 aaPredicted RBP9.99□□□□□ -0.81
CPSF7-212ENST00000489728 ARHGAP21Q5T5U3 1957 aa9.99□□□□□ -0.81
CPSF7-212ENST00000489728 COL12A1Q99715 3063 aa9.98□□□□□ -0.81
CPSF7-212ENST00000489728 CLDN24A6NM45 220 aa9.98□□□□□ -0.81
CPSF7-212ENST00000489728 CLCA1A8K7I4 914 aa9.98□□□□□ -0.81
CPSF7-212ENST00000489728 FAM220BPB1ANY3 271 aa9.98□□□□□ -0.81
CPSF7-212ENST00000489728 CYP7B1O75881 506 aa9.98□□□□□ -0.81
CPSF7-212ENST00000489728 IL2RAP01589 272 aa9.98□□□□□ -0.81
CPSF7-212ENST00000489728 CRHP06850 196 aa9.98□□□□□ -0.81
CPSF7-212ENST00000489728 C8BP07358 591 aa9.98□□□□□ -0.81
CPSF7-212ENST00000489728 GP1BBP13224 206 aa9.98□□□□□ -0.81
CPSF7-212ENST00000489728 STARP49675 285 aa9.98□□□□□ -0.81
CPSF7-212ENST00000489728 CLK1P49759 484 aaKnown RBP9.98□□□□□ -0.81
CPSF7-212ENST00000489728 GZMMP51124 257 aa9.98□□□□□ -0.81
CPSF7-212ENST00000489728 MNAT1P51948 309 aa9.98□□□□□ -0.81
CPSF7-212ENST00000489728 SESN3P58005 492 aa9.98□□□□□ -0.81
CPSF7-212ENST00000489728 PMPCAQ10713 525 aa9.98□□□□□ -0.81
CPSF7-212ENST00000489728 SELPLGQ14242 412 aa9.98□□□□□ -0.81
CPSF7-212ENST00000489728 TOMM34Q15785 309 aaPredicted RBP9.98□□□□□ -0.81
CPSF7-212ENST00000489728 RABL3Q5HYI8 236 aa9.98□□□□□ -0.81
CPSF7-212ENST00000489728 OR2A2Q6IF42 318 aa9.98□□□□□ -0.81
CPSF7-212ENST00000489728 CCDC80Q76M96 950 aa9.98□□□□□ -0.81
CPSF7-212ENST00000489728 VRK2Q86Y07 508 aa9.98□□□□□ -0.81
CPSF7-212ENST00000489728 ARMC8Q8IUR7 673 aa9.98□□□□□ -0.81
CPSF7-212ENST00000489728 LILRA2Q8N149 483 aa9.98□□□□□ -0.81
CPSF7-212ENST00000489728 POU5F2Q8N7G0 328 aa9.98□□□□□ -0.81
CPSF7-212ENST00000489728 CCDC197Q8NCU1 140 aa9.98□□□□□ -0.81
CPSF7-212ENST00000489728 FBXO27Q8NI29 283 aa9.98□□□□□ -0.81
CPSF7-212ENST00000489728 ZNF563Q8TA94 476 aa9.98□□□□□ -0.81
CPSF7-212ENST00000489728 KLHL15Q96M94 604 aa9.98□□□□□ -0.81
CPSF7-212ENST00000489728 TRIB1Q96RU8 372 aa9.98□□□□□ -0.81
CPSF7-212ENST00000489728 PINK1Q9BXM7 581 aa9.98□□□□□ -0.81
CPSF7-212ENST00000489728 TIGARQ9NQ88 270 aa9.98□□□□□ -0.81
CPSF7-212ENST00000489728 NDE1Q9NXR1 346 aa9.98□□□□□ -0.81
CPSF7-212ENST00000489728 KLHL28Q9NXS3 571 aa9.98□□□□□ -0.81
CPSF7-212ENST00000489728 ALKBH4Q9NXW9 302 aa9.98□□□□□ -0.81
CPSF7-212ENST00000489728 DIDO1Q9BTC0 2240 aaKnown RBP9.98□□□□□ -0.81
CPSF7-212ENST00000489728 PCNX3Q9H6A9 2034 aa9.97□□□□□ -0.81
CPSF7-212ENST00000489728 MYO7BQ6PIF6 2116 aa9.97□□□□□ -0.81
CPSF7-212ENST00000489728 SYT5O00445 386 aa9.97□□□□□ -0.81
CPSF7-212ENST00000489728 AIM2O14862 343 aa9.97□□□□□ -0.81
CPSF7-212ENST00000489728 BCAS1O75363 584 aaPredicted RBP9.97□□□□□ -0.81
CPSF7-212ENST00000489728 MFN2O95140 757 aa9.97□□□□□ -0.81
CPSF7-212ENST00000489728 CLDN14O95500 239 aa9.97□□□□□ -0.81
CPSF7-212ENST00000489728 IL18BPO95998 194 aa9.97□□□□□ -0.81
CPSF7-212ENST00000489728 TCEA1P23193 301 aaKnown RBP9.97□□□□□ -0.81
CPSF7-212ENST00000489728 SLC1A3P43003 542 aa9.97□□□□□ -0.81
CPSF7-212ENST00000489728 NUDT2P50583 147 aa9.97□□□□□ -0.81
CPSF7-212ENST00000489728 RNF144AP50876 292 aaPredicted RBP9.97□□□□□ -0.81
CPSF7-212ENST00000489728 POLR2HP52434 150 aaKnown RBP9.97□□□□□ -0.81
CPSF7-212ENST00000489728 CLDN15P56746 228 aa9.97□□□□□ -0.81
CPSF7-212ENST00000489728 CLDN20P56880 219 aa9.97□□□□□ -0.81
CPSF7-212ENST00000489728 COPZ1P61923 177 aa9.97□□□□□ -0.81
CPSF7-212ENST00000489728 SRYQ05066 204 aa9.97□□□□□ -0.81
CPSF7-212ENST00000489728 KRT72Q14CN4 511 aa9.97□□□□□ -0.81
CPSF7-212ENST00000489728 CTU2Q2VPK5 515 aaKnown RBP9.97□□□□□ -0.81
CPSF7-212ENST00000489728 SLC25A35Q3KQZ1 300 aa9.97□□□□□ -0.81
CPSF7-212ENST00000489728 SEM1Q6ZVN7 128 aa9.97□□□□□ -0.81
CPSF7-212ENST00000489728 PLEKHM3Q6ZWE6 761 aa9.97□□□□□ -0.81
CPSF7-212ENST00000489728 MAMDC2Q7Z304 686 aaPredicted RBP9.97□□□□□ -0.81
CPSF7-212ENST00000489728 UBQLNLQ8IYU4 475 aa9.97□□□□□ -0.81
CPSF7-212ENST00000489728 RPRMLQ8N4K4 120 aa9.97□□□□□ -0.81
CPSF7-212ENST00000489728 OR5M1Q8NGP8 315 aa9.97□□□□□ -0.81
CPSF7-212ENST00000489728 OR2V1Q8NHB1 315 aa9.97□□□□□ -0.81
CPSF7-212ENST00000489728 LILRB4Q8NHJ6 448 aa9.97□□□□□ -0.81
CPSF7-212ENST00000489728 CA5BP1Q8WTZ4 195 aa9.97□□□□□ -0.81
CPSF7-212ENST00000489728 ADGRG7Q96K78 797 aa9.97□□□□□ -0.81
CPSF7-212ENST00000489728 ZNF583Q96ND8 569 aa9.97□□□□□ -0.81
CPSF7-212ENST00000489728 KLHDC3Q9BQ90 382 aa9.97□□□□□ -0.81
CPSF7-212ENST00000489728 TRIM8Q9BZR9 551 aa9.97□□□□□ -0.81
CPSF7-212ENST00000489728 SPAG4Q9NPE6 437 aa9.97□□□□□ -0.81
CPSF7-212ENST00000489728 ZNF629Q9UEG4 869 aaPredicted RBP9.97□□□□□ -0.81
CPSF7-212ENST00000489728 TESQ9UGI8 421 aaKnown RBP9.97□□□□□ -0.81
CPSF7-212ENST00000489728 CHRNA9Q9UGM1 479 aa9.97□□□□□ -0.81
CPSF7-212ENST00000489728 RNF6Q9Y252 685 aa9.97□□□□□ -0.81
CPSF7-212ENST00000489728 CHST2Q9Y4C5 530 aa9.97□□□□□ -0.81
CPSF7-212ENST00000489728 USP9YO00507 2555 aaPredicted RBP9.97□□□□□ -0.81
CPSF7-212ENST00000489728 HEATR5AQ86XA9 2040 aa9.97□□□□□ -0.81
CPSF7-212ENST00000489728 A0A0G2JNJ9 132 aa9.96□□□□□ -0.82
CPSF7-212ENST00000489728 SLC22A20A6NK97 555 aa9.96□□□□□ -0.82
CPSF7-212ENST00000489728 SHISA8B8ZZ34 492 aa9.96□□□□□ -0.82
CPSF7-212ENST00000489728 EIF1AYO14602 144 aaKnown RBP9.96□□□□□ -0.82
CPSF7-212ENST00000489728 SEC14L5O43304 696 aa9.96□□□□□ -0.82
CPSF7-212ENST00000489728 ZNF208O43345 1280 aa9.96□□□□□ -0.82
CPSF7-212ENST00000489728 DNPH1O43598 174 aa9.96□□□□□ -0.82
CPSF7-212ENST00000489728 FMO6PO60774 539 aa9.96□□□□□ -0.82
CPSF7-212ENST00000489728 ADAM11O75078 769 aa9.96□□□□□ -0.82
CPSF7-212ENST00000489728 RCBTB2O95199 551 aa9.96□□□□□ -0.82
CPSF7-212ENST00000489728 IFNA14P01570 189 aa9.96□□□□□ -0.82
CPSF7-212ENST00000489728 RNF224P0DH78 156 aa9.96□□□□□ -0.82
CPSF7-212ENST00000489728 SLC7A1P30825 629 aa9.96□□□□□ -0.82
CPSF7-212ENST00000489728 RYKP34925 604 aa9.96□□□□□ -0.82
CPSF7-212ENST00000489728 OPRM1P35372 400 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms