RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 GPR119Q8TDV5 335 aa12.91□□□□□ -0.34
VPS26A-205ENST00000489656 TMEM239Q8WW34 195 aa12.91□□□□□ -0.34
VPS26A-205ENST00000489656 C3orf49Q96BT1 292 aa12.91□□□□□ -0.34
VPS26A-205ENST00000489656 SH3YL1Q96HL8 342 aaPredicted RBP12.91□□□□□ -0.34
VPS26A-205ENST00000489656 MBOAT4Q96T53 435 aa12.91□□□□□ -0.34
VPS26A-205ENST00000489656 GABARAPL3Q9BY60 117 aa12.91□□□□□ -0.34
VPS26A-205ENST00000489656 ANGPTL4Q9BY76 406 aa12.91□□□□□ -0.34
VPS26A-205ENST00000489656 DPH1Q9BZG8 443 aa12.91□□□□□ -0.34
VPS26A-205ENST00000489656 ADAM19Q9H013 955 aa12.91□□□□□ -0.34
VPS26A-205ENST00000489656 TOR3AQ9H497 397 aa12.91□□□□□ -0.34
VPS26A-205ENST00000489656 ZNF556Q9HAH1 456 aa12.91□□□□□ -0.34
VPS26A-205ENST00000489656 PAPOLBQ9NRJ5 636 aaKnown RBP12.91□□□□□ -0.34
VPS26A-205ENST00000489656 SELENONQ9NZV5 590 aa12.91□□□□□ -0.34
VPS26A-205ENST00000489656 DKK4Q9UBT3 224 aa12.91□□□□□ -0.34
VPS26A-205ENST00000489656 PCDHGB6Q9Y5F9 930 aa12.91□□□□□ -0.34
VPS26A-205ENST00000489656 TNRC6AQ8NDV7 1962 aaKnown RBP12.9□□□□□ -0.34
VPS26A-205ENST00000489656 A0A087WUJ7 227 aa12.9□□□□□ -0.34
VPS26A-205ENST00000489656 HTR3EA5X5Y0 456 aa12.9□□□□□ -0.34
VPS26A-205ENST00000489656 ETV2O00321 342 aaPredicted RBP12.9□□□□□ -0.34
VPS26A-205ENST00000489656 SLC16A6O15403 523 aa12.9□□□□□ -0.34
VPS26A-205ENST00000489656 NKX2-8O15522 239 aa12.9□□□□□ -0.34
VPS26A-205ENST00000489656 CDC40O60508 579 aaKnown RBP eCLIP12.9□□□□□ -0.34
VPS26A-205ENST00000489656 MITFO75030 526 aaPredicted RBP12.9□□□□□ -0.34
VPS26A-205ENST00000489656 IGF2P01344 180 aa12.9□□□□□ -0.34
VPS26A-205ENST00000489656 GASTP01350 101 aa12.9□□□□□ -0.34
VPS26A-205ENST00000489656 PNMTP11086 282 aa12.9□□□□□ -0.34
VPS26A-205ENST00000489656 ITGA3P26006 1051 aa12.9□□□□□ -0.34
VPS26A-205ENST00000489656 MST1P26927 711 aa12.9□□□□□ -0.34
VPS26A-205ENST00000489656 OMPP47874 163 aa12.9□□□□□ -0.34
VPS26A-205ENST00000489656 IDH2P48735 452 aaKnown RBP12.9□□□□□ -0.34
VPS26A-205ENST00000489656 CTBP2P56545 445 aa12.9□□□□□ -0.34
VPS26A-205ENST00000489656 CDC20Q12834 499 aa12.9□□□□□ -0.34
VPS26A-205ENST00000489656 KCNAB2Q13303 367 aa12.9□□□□□ -0.34
VPS26A-205ENST00000489656 COL28A1Q2UY09 1125 aa12.9□□□□□ -0.34
VPS26A-205ENST00000489656 C6orf52Q5T4I8 152 aa12.9□□□□□ -0.34
VPS26A-205ENST00000489656 ATP1A1-AS1Q5TC04 95 aa12.9□□□□□ -0.34
VPS26A-205ENST00000489656 ZNF468Q5VIY5 522 aaPredicted RBP12.9□□□□□ -0.34
VPS26A-205ENST00000489656 ABHD17BQ5VST6 288 aa12.9□□□□□ -0.34
VPS26A-205ENST00000489656 TTC23Q5W5X9 447 aa12.9□□□□□ -0.34
VPS26A-205ENST00000489656 SLC22A10Q63ZE4 541 aa12.9□□□□□ -0.34
VPS26A-205ENST00000489656 BICRALQ6AI39 1079 aa12.9□□□□□ -0.34
VPS26A-205ENST00000489656 USP51Q70EK9 711 aa12.9□□□□□ -0.34
VPS26A-205ENST00000489656 RRM2BQ7LG56 351 aa12.9□□□□□ -0.34
VPS26A-205ENST00000489656 ZER1Q7Z7L7 766 aa12.9□□□□□ -0.34
VPS26A-205ENST00000489656 ATG4DQ86TL0 474 aaPredicted RBP12.9□□□□□ -0.34
VPS26A-205ENST00000489656 CHERPQ8IWX8 916 aaKnown RBP12.9□□□□□ -0.34
VPS26A-205ENST00000489656 CYP4Z2PQ8N1L4 340 aa12.9□□□□□ -0.34
VPS26A-205ENST00000489656 BEST3Q8N1M1 668 aa12.9□□□□□ -0.34
VPS26A-205ENST00000489656 GALNT16Q8N428 558 aa12.9□□□□□ -0.34
VPS26A-205ENST00000489656 MARVELD2Q8N4S9 558 aa12.9□□□□□ -0.34
VPS26A-205ENST00000489656 FADS6Q8N9I5 356 aa12.9□□□□□ -0.34
VPS26A-205ENST00000489656 TMEM255BQ8WV15 326 aa12.9□□□□□ -0.34
VPS26A-205ENST00000489656 KCNE4Q8WWG9 221 aa12.9□□□□□ -0.34
VPS26A-205ENST00000489656 ST8SIA1Q92185 356 aa12.9□□□□□ -0.34
VPS26A-205ENST00000489656 NIPSNAP1Q9BPW8 284 aa12.9□□□□□ -0.34
VPS26A-205ENST00000489656 ANKRD60Q9BZ19 345 aa12.9□□□□□ -0.34
VPS26A-205ENST00000489656 GALNT9Q9HCQ5 603 aa12.9□□□□□ -0.34
VPS26A-205ENST00000489656 KRCC1Q9NPI7 259 aaPredicted RBP12.9□□□□□ -0.34
VPS26A-205ENST00000489656 PPP4R1LQ9P1A2 415 aa12.9□□□□□ -0.34
VPS26A-205ENST00000489656 ABI3Q9P2A4 366 aa12.9□□□□□ -0.34
VPS26A-205ENST00000489656 POLHQ9Y253 713 aa12.9□□□□□ -0.34
VPS26A-205ENST00000489656 ARGFXA6NJG6 315 aa12.89□□□□□ -0.35
VPS26A-205ENST00000489656 C17orf51A8MQB3 221 aa12.89□□□□□ -0.35
VPS26A-205ENST00000489656 KLF4O43474 513 aa12.89□□□□□ -0.35
VPS26A-205ENST00000489656 CCL3P10147 92 aa12.89□□□□□ -0.35
VPS26A-205ENST00000489656 GP1BBP13224 206 aa12.89□□□□□ -0.35
VPS26A-205ENST00000489656 GSTM3P21266 225 aa12.89□□□□□ -0.35
VPS26A-205ENST00000489656 FPR3P25089 353 aa12.89□□□□□ -0.35
VPS26A-205ENST00000489656 GSSP48637 474 aa12.89□□□□□ -0.35
VPS26A-205ENST00000489656 CYB561P49447 251 aa12.89□□□□□ -0.35
VPS26A-205ENST00000489656 RPS6KA3P51812 740 aa12.89□□□□□ -0.35
VPS26A-205ENST00000489656 ESRRGP62508 458 aa12.89□□□□□ -0.35
VPS26A-205ENST00000489656 PRKCDQ05655 676 aa12.89□□□□□ -0.35
VPS26A-205ENST00000489656 TSPAN31Q12999 210 aa12.89□□□□□ -0.35
VPS26A-205ENST00000489656 MED21Q13503 144 aa12.89□□□□□ -0.35
VPS26A-205ENST00000489656 KLHL17Q6TDP4 642 aa12.89□□□□□ -0.35
VPS26A-205ENST00000489656 ZNF227Q86WZ6 799 aa12.89□□□□□ -0.35
VPS26A-205ENST00000489656 NRMQ8IXM6 262 aa12.89□□□□□ -0.35
VPS26A-205ENST00000489656 ZNF563Q8TA94 476 aa12.89□□□□□ -0.35
VPS26A-205ENST00000489656 GNPDA2Q8TDQ7 276 aa12.89□□□□□ -0.35
VPS26A-205ENST00000489656 TMEM234Q8WY98 164 aa12.89□□□□□ -0.35
VPS26A-205ENST00000489656 TMEM41AQ96HV5 264 aa12.89□□□□□ -0.35
VPS26A-205ENST00000489656 TMEM43Q9BTV4 400 aa12.89□□□□□ -0.35
VPS26A-205ENST00000489656 SLC19A3Q9BZV2 496 aa12.89□□□□□ -0.35
VPS26A-205ENST00000489656 UCK2Q9BZX2 261 aa12.89□□□□□ -0.35
VPS26A-205ENST00000489656 GRIP2Q9C0E4 1043 aa12.89□□□□□ -0.35
VPS26A-205ENST00000489656 PROK2Q9HC23 129 aa12.89□□□□□ -0.35
VPS26A-205ENST00000489656 FAM118AQ9NWS6 357 aa12.89□□□□□ -0.35
VPS26A-205ENST00000489656 TAS2R10Q9NYW0 307 aa12.89□□□□□ -0.35
VPS26A-205ENST00000489656 STMN3Q9NZ72 180 aa12.89□□□□□ -0.35
VPS26A-205ENST00000489656 TMEM5Q9Y2B1 443 aa12.89□□□□□ -0.35
VPS26A-205ENST00000489656 MED31Q9Y3C7 131 aa12.89□□□□□ -0.35
VPS26A-205ENST00000489656 B4DXG7 233 aa12.88□□□□□ -0.35
VPS26A-205ENST00000489656 TLX3O43711 291 aaPredicted RBP12.88□□□□□ -0.35
VPS26A-205ENST00000489656 SNX4O95219 450 aa12.88□□□□□ -0.35
VPS26A-205ENST00000489656 SPINK2P20155 84 aa12.88□□□□□ -0.35
VPS26A-205ENST00000489656 MYF6P23409 242 aa12.88□□□□□ -0.35
VPS26A-205ENST00000489656 ITPKBP27987 946 aa12.88□□□□□ -0.35
VPS26A-205ENST00000489656 CASRP41180 1078 aa12.88□□□□□ -0.35
VPS26A-205ENST00000489656 HTR3AP46098 478 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms