RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 FBXO17Q96EF6 278 aa6.48□□□□□ -1.37
EXOSC3-206ENST00000489414 TMEM41AQ96HV5 264 aa6.48□□□□□ -1.37
EXOSC3-206ENST00000489414 HIST1H2AHQ96KK5 128 aa6.48□□□□□ -1.37
EXOSC3-206ENST00000489414 HIST1H2AJQ99878 128 aa6.48□□□□□ -1.37
EXOSC3-206ENST00000489414 H2AFJQ9BTM1 129 aa6.48□□□□□ -1.37
EXOSC3-206ENST00000489414 NARFLQ9H6Q4 476 aa6.48□□□□□ -1.37
EXOSC3-206ENST00000489414 C7orf69Q9H7B7 122 aa6.48□□□□□ -1.37
EXOSC3-206ENST00000489414 WDR41Q9HAD4 459 aa6.48□□□□□ -1.37
EXOSC3-206ENST00000489414 GP6Q9HCN6 339 aa6.48□□□□□ -1.37
EXOSC3-206ENST00000489414 GID8Q9NWU2 228 aa6.48□□□□□ -1.37
EXOSC3-206ENST00000489414 TREM2Q9NZC2 230 aa6.48□□□□□ -1.37
EXOSC3-206ENST00000489414 GALPQ9UBC7 116 aa6.48□□□□□ -1.37
EXOSC3-206ENST00000489414 OPTCQ9UBM4 332 aa6.48□□□□□ -1.37
EXOSC3-206ENST00000489414 SLC7A8Q9UHI5 535 aa6.48□□□□□ -1.37
EXOSC3-206ENST00000489414 FBXO9Q9UK97 447 aaPredicted RBP6.48□□□□□ -1.37
EXOSC3-206ENST00000489414 NDUFAF1Q9Y375 327 aa6.48□□□□□ -1.37
EXOSC3-206ENST00000489414 ARHGAP32A7KAX9 2087 aa6.48□□□□□ -1.37
EXOSC3-206ENST00000489414 KCNE1BA0A087WTH5 132 aa6.47□□□□□ -1.37
EXOSC3-206ENST00000489414 H0YC42 278 aa6.47□□□□□ -1.37
EXOSC3-206ENST00000489414 NR5A2O00482 541 aa6.47□□□□□ -1.37
EXOSC3-206ENST00000489414 MRASO14807 208 aa6.47□□□□□ -1.37
EXOSC3-206ENST00000489414 WNT9BO14905 357 aa6.47□□□□□ -1.37
EXOSC3-206ENST00000489414 ANGPT2O15123 496 aa6.47□□□□□ -1.37
EXOSC3-206ENST00000489414 HOXA3O43365 443 aaPredicted RBP6.47□□□□□ -1.37
EXOSC3-206ENST00000489414 GALR3O60755 368 aaPredicted RBP6.47□□□□□ -1.37
EXOSC3-206ENST00000489414 TNFRSF21O75509 655 aa6.47□□□□□ -1.37
EXOSC3-206ENST00000489414 KRT36O76013 467 aa6.47□□□□□ -1.37
EXOSC3-206ENST00000489414 BAG2O95816 211 aa6.47□□□□□ -1.37
EXOSC3-206ENST00000489414 JUNP05412 331 aaKnown RBP6.47□□□□□ -1.37
EXOSC3-206ENST00000489414 LINC00032P0C843 101 aa6.47□□□□□ -1.37
EXOSC3-206ENST00000489414 MPC1LP0DKB6 136 aa6.47□□□□□ -1.37
EXOSC3-206ENST00000489414 SAGP10523 405 aaPredicted RBP6.47□□□□□ -1.37
EXOSC3-206ENST00000489414 PCSK2P16519 638 aa6.47□□□□□ -1.37
EXOSC3-206ENST00000489414 ME2P23368 584 aa6.47□□□□□ -1.37
EXOSC3-206ENST00000489414 PTDSS1P48651 473 aaKnown RBP6.47□□□□□ -1.37
EXOSC3-206ENST00000489414 GTF2A1P52655 376 aaPredicted RBP6.47□□□□□ -1.37
EXOSC3-206ENST00000489414 CLDN15P56746 228 aa6.47□□□□□ -1.37
EXOSC3-206ENST00000489414 RASGEF1BQ0VAM2 473 aa6.47□□□□□ -1.37
EXOSC3-206ENST00000489414 MAD2L1Q13257 205 aaPredicted RBP6.47□□□□□ -1.37
EXOSC3-206ENST00000489414 GTF2H2Q13888 395 aa6.47□□□□□ -1.37
EXOSC3-206ENST00000489414 PON3Q15166 354 aa6.47□□□□□ -1.37
EXOSC3-206ENST00000489414 TAF11Q15544 211 aa6.47□□□□□ -1.37
EXOSC3-206ENST00000489414 PHKG1Q16816 387 aa6.47□□□□□ -1.37
EXOSC3-206ENST00000489414 ATP6AP1LQ52LC2 224 aa6.47□□□□□ -1.37
EXOSC3-206ENST00000489414 GTF2H2CQ6P1K8 395 aa6.47□□□□□ -1.37
EXOSC3-206ENST00000489414 ZFP1Q6P2D0 407 aa6.47□□□□□ -1.37
EXOSC3-206ENST00000489414 TMEM108Q6UXF1 575 aa6.47□□□□□ -1.37
EXOSC3-206ENST00000489414 HACD2Q6Y1H2 254 aa6.47□□□□□ -1.37
EXOSC3-206ENST00000489414 LRRC74BQ6ZQY2 392 aa6.47□□□□□ -1.37
EXOSC3-206ENST00000489414 LARP4Q71RC2 724 aaKnown RBP eCLIP6.47□□□□□ -1.37
EXOSC3-206ENST00000489414 SLC46A3Q7Z3Q1 461 aa6.47□□□□□ -1.37
EXOSC3-206ENST00000489414 MYLK4Q86YV6 388 aaPredicted RBP6.47□□□□□ -1.37
EXOSC3-206ENST00000489414 VRK3Q8IV63 474 aa6.47□□□□□ -1.37
EXOSC3-206ENST00000489414 OR14L1PQ8NHC6 308 aa6.47□□□□□ -1.37
EXOSC3-206ENST00000489414 NUBPLQ8TB37 319 aa6.47□□□□□ -1.37
EXOSC3-206ENST00000489414 METTL6Q8TCB7 284 aa6.47□□□□□ -1.37
EXOSC3-206ENST00000489414 SLC26A7Q8TE54 656 aa6.47□□□□□ -1.37
EXOSC3-206ENST00000489414 TSPEARQ8WU66 669 aa6.47□□□□□ -1.37
EXOSC3-206ENST00000489414 WDR60Q8WVS4 1066 aa6.47□□□□□ -1.37
EXOSC3-206ENST00000489414 ROPN1LQ96C74 230 aa6.47□□□□□ -1.37
EXOSC3-206ENST00000489414 TM4SF19Q96DZ7 209 aa6.47□□□□□ -1.37
EXOSC3-206ENST00000489414 CLPTM1LQ96KA5 538 aa6.47□□□□□ -1.37
EXOSC3-206ENST00000489414 FOPNLQ96NB1 174 aa6.47□□□□□ -1.37
EXOSC3-206ENST00000489414 NSUN5Q96P11 429 aaKnown RBP6.47□□□□□ -1.37
EXOSC3-206ENST00000489414 CDRT15Q96T59 188 aa6.47□□□□□ -1.37
EXOSC3-206ENST00000489414 PINK1Q9BXM7 581 aa6.47□□□□□ -1.37
EXOSC3-206ENST00000489414 KRTAP9-2Q9BYQ4 174 aa6.47□□□□□ -1.37
EXOSC3-206ENST00000489414 AKTIPQ9H8T0 292 aa6.47□□□□□ -1.37
EXOSC3-206ENST00000489414 TMEM45AQ9NWC5 275 aa6.47□□□□□ -1.37
EXOSC3-206ENST00000489414 FBXO34Q9NWN3 711 aa6.47□□□□□ -1.37
EXOSC3-206ENST00000489414 ADA2Q9NZK5 511 aa6.47□□□□□ -1.37
EXOSC3-206ENST00000489414 CCDC167Q9P0B6 97 aa6.47□□□□□ -1.37
EXOSC3-206ENST00000489414 MMACHCQ9Y4U1 282 aa6.47□□□□□ -1.37
EXOSC3-206ENST00000489414 DNAJC15Q9Y5T4 150 aa6.47□□□□□ -1.37
EXOSC3-206ENST00000489414 K7EPI3 171 aa6.46□□□□□ -1.38
EXOSC3-206ENST00000489414 SLC28A1O00337 649 aa6.46□□□□□ -1.38
EXOSC3-206ENST00000489414 GNB5O14775 395 aa6.46□□□□□ -1.38
EXOSC3-206ENST00000489414 PLPP2O43688 288 aa6.46□□□□□ -1.38
EXOSC3-206ENST00000489414 SS18L1O75177 396 aaPredicted RBP6.46□□□□□ -1.38
EXOSC3-206ENST00000489414 STK16O75716 305 aa6.46□□□□□ -1.38
EXOSC3-206ENST00000489414 AQP8O94778 261 aa6.46□□□□□ -1.38
EXOSC3-206ENST00000489414 WDR47O94967 919 aa6.46□□□□□ -1.38
EXOSC3-206ENST00000489414 OR4F21O95013 312 aa6.46□□□□□ -1.38
EXOSC3-206ENST00000489414 MPZL1O95297 269 aa6.46□□□□□ -1.38
EXOSC3-206ENST00000489414 GUCA1CO95843 209 aa6.46□□□□□ -1.38
EXOSC3-206ENST00000489414 ANPEPP15144 967 aa6.46□□□□□ -1.38
EXOSC3-206ENST00000489414 IGLL1P15814 213 aa6.46□□□□□ -1.38
EXOSC3-206ENST00000489414 EPB42P16452 691 aa6.46□□□□□ -1.38
EXOSC3-206ENST00000489414 GNAZP19086 355 aa6.46□□□□□ -1.38
EXOSC3-206ENST00000489414 GATA3P23771 443 aa6.46□□□□□ -1.38
EXOSC3-206ENST00000489414 LMO1P25800 156 aa6.46□□□□□ -1.38
EXOSC3-206ENST00000489414 AOAHP28039 575 aa6.46□□□□□ -1.38
EXOSC3-206ENST00000489414 GPC1P35052 558 aa6.46□□□□□ -1.38
EXOSC3-206ENST00000489414 MSX2P35548 267 aaPredicted RBP6.46□□□□□ -1.38
EXOSC3-206ENST00000489414 RFX3P48380 749 aa6.46□□□□□ -1.38
EXOSC3-206ENST00000489414 HSPA7P48741 367 aa6.46□□□□□ -1.38
EXOSC3-206ENST00000489414 HNMTP50135 292 aa6.46□□□□□ -1.38
EXOSC3-206ENST00000489414 AP1S2P56377 157 aa6.46□□□□□ -1.38
EXOSC3-206ENST00000489414 PSME3P61289 254 aa6.46□□□□□ -1.38
EXOSC3-206ENST00000489414 ERVK-8P63133 956 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms