RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 ZNF600Q6ZNG1 722 aa3.34□□□□□ -1.87
XRN1-213ENST00000489241 RUFY3Q7L099 469 aa3.34□□□□□ -1.87
XRN1-213ENST00000489241 CDR2LQ86X02 465 aaPredicted RBP3.34□□□□□ -1.87
XRN1-213ENST00000489241 HIPK1Q86Z02 1210 aa3.34□□□□□ -1.87
XRN1-213ENST00000489241 C9orf40Q8IXQ3 194 aa3.34□□□□□ -1.87
XRN1-213ENST00000489241 MCOLN2Q8IZK6 566 aa3.34□□□□□ -1.87
XRN1-213ENST00000489241 FGFRL1Q8N441 504 aa3.34□□□□□ -1.87
XRN1-213ENST00000489241 NECAB1Q8N987 351 aa3.34□□□□□ -1.87
XRN1-213ENST00000489241 OR52K2Q8NGK3 314 aa3.34□□□□□ -1.87
XRN1-213ENST00000489241 TFB1MQ8WVM0 346 aaKnown RBP3.34□□□□□ -1.87
XRN1-213ENST00000489241 C10orf35Q96D05 121 aa3.34□□□□□ -1.87
XRN1-213ENST00000489241 CNOT6LQ96LI5 555 aaKnown RBP3.34□□□□□ -1.87
XRN1-213ENST00000489241 COPS8Q99627 209 aa3.34□□□□□ -1.87
XRN1-213ENST00000489241 SOSTQ9BQB4 213 aa3.34□□□□□ -1.87
XRN1-213ENST00000489241 CHRDL1Q9BU40 450 aa3.34□□□□□ -1.87
XRN1-213ENST00000489241 TSSK1BQ9BXA7 367 aa3.34□□□□□ -1.87
XRN1-213ENST00000489241 KLK13Q9UKR3 277 aa3.34□□□□□ -1.87
XRN1-213ENST00000489241 IFT52Q9Y366 437 aa3.34□□□□□ -1.87
XRN1-213ENST00000489241 RPAP1Q9BWH6 1393 aaPredicted RBP3.34□□□□□ -1.88
XRN1-213ENST00000489241 COL2A1P02458 1487 aaPredicted RBP3.34□□□□□ -1.88
XRN1-213ENST00000489241 LOC100131303A0A0U1RQF7 123 aa3.33□□□□□ -1.88
XRN1-213ENST00000489241 BTBD17A6NE02 478 aa3.33□□□□□ -1.88
XRN1-213ENST00000489241 ACOD1A6NK06 481 aa3.33□□□□□ -1.88
XRN1-213ENST00000489241 E9PBE3 544 aa3.33□□□□□ -1.88
XRN1-213ENST00000489241 F5H6K3 240 aa3.33□□□□□ -1.88
XRN1-213ENST00000489241 K7ENP7 123 aa3.33□□□□□ -1.88
XRN1-213ENST00000489241 PI15O43692 258 aa3.33□□□□□ -1.88
XRN1-213ENST00000489241 KLHL41O60662 606 aa3.33□□□□□ -1.88
XRN1-213ENST00000489241 SH3BGRLO75368 114 aa3.33□□□□□ -1.88
XRN1-213ENST00000489241 CRLF1O75462 422 aa3.33□□□□□ -1.88
XRN1-213ENST00000489241 UGT2B17O75795 530 aa3.33□□□□□ -1.88
XRN1-213ENST00000489241 NOL4O94818 638 aa3.33□□□□□ -1.88
XRN1-213ENST00000489241 DIRAS1O95057 198 aa3.33□□□□□ -1.88
XRN1-213ENST00000489241 IGHV3-13P01766 116 aa3.33□□□□□ -1.88
XRN1-213ENST00000489241 GCAP28676 217 aa3.33□□□□□ -1.88
XRN1-213ENST00000489241 RPL13AP40429 203 aaKnown RBP3.33□□□□□ -1.88
XRN1-213ENST00000489241 STARP49675 285 aa3.33□□□□□ -1.88
XRN1-213ENST00000489241 HLCSP50747 726 aa3.33□□□□□ -1.88
XRN1-213ENST00000489241 KLRC3Q07444 240 aa3.33□□□□□ -1.88
XRN1-213ENST00000489241 KLRB1Q12918 225 aa3.33□□□□□ -1.88
XRN1-213ENST00000489241 HSP90AB3PQ58FF7 597 aa3.33□□□□□ -1.88
XRN1-213ENST00000489241 C6orf226Q5I0X4 101 aa3.33□□□□□ -1.88
XRN1-213ENST00000489241 C1orf220Q5T0J3 134 aa3.33□□□□□ -1.88
XRN1-213ENST00000489241 SLC25A42Q86VD7 318 aa3.33□□□□□ -1.88
XRN1-213ENST00000489241 TRIM69Q86WT6 500 aa3.33□□□□□ -1.88
XRN1-213ENST00000489241 CCDC50Q8IVM0 306 aa3.33□□□□□ -1.88
XRN1-213ENST00000489241 SLC35F2Q8IXU6 374 aa3.33□□□□□ -1.88
XRN1-213ENST00000489241 BBS5Q8N3I7 341 aa3.33□□□□□ -1.88
XRN1-213ENST00000489241 ALLCQ8N6M5 410 aa3.33□□□□□ -1.88
XRN1-213ENST00000489241 TRPV1Q8NER1 839 aa3.33□□□□□ -1.88
XRN1-213ENST00000489241 OR2L2Q8NH16 312 aa3.33□□□□□ -1.88
XRN1-213ENST00000489241 SLC2A14Q8TDB8 520 aa3.33□□□□□ -1.88
XRN1-213ENST00000489241 FAM222BQ8WU58 562 aa3.33□□□□□ -1.88
XRN1-213ENST00000489241 EFHD2Q96C19 240 aaPredicted RBP3.33□□□□□ -1.88
XRN1-213ENST00000489241 FAF2Q96CS3 445 aa3.33□□□□□ -1.88
XRN1-213ENST00000489241 RASD2Q96D21 266 aa3.33□□□□□ -1.88
XRN1-213ENST00000489241 PLIN2Q99541 437 aa3.33□□□□□ -1.88
XRN1-213ENST00000489241 ZNF670Q9BS34 389 aa3.33□□□□□ -1.88
XRN1-213ENST00000489241 SLC35A5Q9BS91 424 aa3.33□□□□□ -1.88
XRN1-213ENST00000489241 CAB39LQ9H9S4 337 aa3.33□□□□□ -1.88
XRN1-213ENST00000489241 POPDC2Q9HBU9 364 aa3.33□□□□□ -1.88
XRN1-213ENST00000489241 ZFP14Q9HCL3 533 aa3.33□□□□□ -1.88
XRN1-213ENST00000489241 SENP1Q9P0U3 644 aa3.33□□□□□ -1.88
XRN1-213ENST00000489241 SPATA7Q9P0W8 599 aa3.33□□□□□ -1.88
XRN1-213ENST00000489241 ERVW-1Q9UQF0 538 aa3.33□□□□□ -1.88
XRN1-213ENST00000489241 PDE10AQ9Y233 779 aa3.33□□□□□ -1.88
XRN1-213ENST00000489241 FRG2CA6NGY1 282 aa3.32□□□□□ -1.88
XRN1-213ENST00000489241 A8MX80 341 aa3.32□□□□□ -1.88
XRN1-213ENST00000489241 CDX4O14627 284 aaPredicted RBP3.32□□□□□ -1.88
XRN1-213ENST00000489241 PRKYO43930 277 aa3.32□□□□□ -1.88
XRN1-213ENST00000489241 RAMP3O60896 148 aa3.32□□□□□ -1.88
XRN1-213ENST00000489241 GPX5O75715 221 aa3.32□□□□□ -1.88
XRN1-213ENST00000489241 NDUFB10O96000 172 aa3.32□□□□□ -1.88
XRN1-213ENST00000489241 ETS2P15036 469 aa3.32□□□□□ -1.88
XRN1-213ENST00000489241 IGHV1-2P23083 117 aa3.32□□□□□ -1.88
XRN1-213ENST00000489241 HMGB2P26583 209 aaKnown RBP3.32□□□□□ -1.88
XRN1-213ENST00000489241 IL2RGP31785 369 aa3.32□□□□□ -1.88
XRN1-213ENST00000489241 NF2P35240 595 aa3.32□□□□□ -1.88
XRN1-213ENST00000489241 MAP3K8P41279 467 aa3.32□□□□□ -1.88
XRN1-213ENST00000489241 XCR1P46094 333 aa3.32□□□□□ -1.88
XRN1-213ENST00000489241 PRKXP51817 358 aa3.32□□□□□ -1.88
XRN1-213ENST00000489241 IST1P53990 364 aa3.32□□□□□ -1.88
XRN1-213ENST00000489241 PRMT2P55345 433 aa3.32□□□□□ -1.88
XRN1-213ENST00000489241 RPS14P62263 151 aaKnown RBP3.32□□□□□ -1.88
XRN1-213ENST00000489241 MRPS11P82912 194 aaKnown RBP3.32□□□□□ -1.88
XRN1-213ENST00000489241 PAX2Q02962 417 aa3.32□□□□□ -1.88
XRN1-213ENST00000489241 SLC15A2Q16348 729 aa3.32□□□□□ -1.88
XRN1-213ENST00000489241 SSX2Q16385 188 aa3.32□□□□□ -1.88
XRN1-213ENST00000489241 IMMTQ16891 758 aaKnown RBP3.32□□□□□ -1.88
XRN1-213ENST00000489241 LIPNQ5VXI9 398 aa3.32□□□□□ -1.88
XRN1-213ENST00000489241 METAP1DQ6UB28 335 aaPredicted RBP3.32□□□□□ -1.88
XRN1-213ENST00000489241 NAXDQ8IW45 347 aa3.32□□□□□ -1.88
XRN1-213ENST00000489241 LYG1Q8N1E2 194 aa3.32□□□□□ -1.88
XRN1-213ENST00000489241 OR2L13Q8N349 312 aa3.32□□□□□ -1.88
XRN1-213ENST00000489241 ATP6V0D2Q8N8Y2 350 aa3.32□□□□□ -1.88
XRN1-213ENST00000489241 RAB3IL1Q8TBN0 382 aa3.32□□□□□ -1.88
XRN1-213ENST00000489241 VN1R17PQ8TDU5 208 aa3.32□□□□□ -1.88
XRN1-213ENST00000489241 MAIP1Q8WWC4 291 aa3.32□□□□□ -1.88
XRN1-213ENST00000489241 TOMM40LQ969M1 308 aa3.32□□□□□ -1.88
XRN1-213ENST00000489241 PSMG2Q969U7 264 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms