RNA–Protein interactions for RNA: ENST00000489130.2

SRRM1-216, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-216ENST00000489130 ANKRD34AQ69YU3 496 aa11.19□□□□□ -0.62
SRRM1-216ENST00000489130 C3orf33Q6P1S2 294 aa11.19□□□□□ -0.62
SRRM1-216ENST00000489130 TFAP2EQ6VUC0 442 aa11.19□□□□□ -0.62
SRRM1-216ENST00000489130 FCRLAQ7L513 359 aa11.19□□□□□ -0.62
SRRM1-216ENST00000489130 CXorf67Q86X51 503 aaPredicted RBP11.19□□□□□ -0.62
SRRM1-216ENST00000489130 ZNF619Q8N2I2 560 aa11.19□□□□□ -0.62
SRRM1-216ENST00000489130 SLC43A2Q8N370 569 aa11.19□□□□□ -0.62
SRRM1-216ENST00000489130 TRIML2Q8N7C3 387 aa11.19□□□□□ -0.62
SRRM1-216ENST00000489130 GLB1L3Q8NCI6 653 aaPredicted RBP11.19□□□□□ -0.62
SRRM1-216ENST00000489130 TMEM234Q8WY98 164 aa11.19□□□□□ -0.62
SRRM1-216ENST00000489130 ARL8AQ96BM9 186 aa11.19□□□□□ -0.62
SRRM1-216ENST00000489130 TLCD1Q96CP7 247 aa11.19□□□□□ -0.62
SRRM1-216ENST00000489130 PIK3IP1Q96FE7 263 aa11.19□□□□□ -0.62
SRRM1-216ENST00000489130 ZC3HAV1LQ96H79 300 aaKnown RBP11.19□□□□□ -0.62
SRRM1-216ENST00000489130 MAELQ96JY0 434 aaKnown RBP11.19□□□□□ -0.62
SRRM1-216ENST00000489130 HS3ST6Q96QI5 342 aa11.19□□□□□ -0.62
SRRM1-216ENST00000489130 PANX1Q96RD7 426 aa11.19□□□□□ -0.62
SRRM1-216ENST00000489130 WDR55Q9H6Y2 383 aaPredicted RBP11.19□□□□□ -0.62
SRRM1-216ENST00000489130 MARCOQ9UEW3 520 aaPredicted RBP11.19□□□□□ -0.62
SRRM1-216ENST00000489130 NUP214P35658 2090 aaPredicted RBP11.19□□□□□ -0.62
SRRM1-216ENST00000489130 ITPR3Q14573 2671 aa11.19□□□□□ -0.62
SRRM1-216ENST00000489130 ZFHX3Q15911 3703 aa11.18□□□□□ -0.62
SRRM1-216ENST00000489130 GOLGA8QA0A0J9YX86 632 aa11.18□□□□□ -0.62
SRRM1-216ENST00000489130 A0A1W2PNR3 127 aa11.18□□□□□ -0.62
SRRM1-216ENST00000489130 GOLGA8OA6NCC3 632 aa11.18□□□□□ -0.62
SRRM1-216ENST00000489130 C9JVG2 144 aa11.18□□□□□ -0.62
SRRM1-216ENST00000489130 GOLGA8NF8WBI6 632 aa11.18□□□□□ -0.62
SRRM1-216ENST00000489130 BCAS1O75363 584 aaPredicted RBP11.18□□□□□ -0.62
SRRM1-216ENST00000489130 ERLIN1O75477 346 aa11.18□□□□□ -0.62
SRRM1-216ENST00000489130 CYP7B1O75881 506 aa11.18□□□□□ -0.62
SRRM1-216ENST00000489130 PRKD3O94806 890 aa11.18□□□□□ -0.62
SRRM1-216ENST00000489130 H6PDO95479 791 aa11.18□□□□□ -0.62
SRRM1-216ENST00000489130 C1QCP02747 245 aa11.18□□□□□ -0.62
SRRM1-216ENST00000489130 PGCP20142 388 aa11.18□□□□□ -0.62
SRRM1-216ENST00000489130 ENPP1P22413 925 aa11.18□□□□□ -0.62
SRRM1-216ENST00000489130 SLC7A1P30825 629 aa11.18□□□□□ -0.62
SRRM1-216ENST00000489130 HOXC12P31275 282 aa11.18□□□□□ -0.62
SRRM1-216ENST00000489130 SESN3P58005 492 aa11.18□□□□□ -0.62
SRRM1-216ENST00000489130 HPCAP84074 193 aa11.18□□□□□ -0.62
SRRM1-216ENST00000489130 PLAURQ03405 335 aa11.18□□□□□ -0.62
SRRM1-216ENST00000489130 FOXD4Q12950 439 aaPredicted RBP11.18□□□□□ -0.62
SRRM1-216ENST00000489130 RNF130Q86XS8 419 aa11.18□□□□□ -0.62
SRRM1-216ENST00000489130 KRTAP1-3Q8IUG1 177 aa11.18□□□□□ -0.62
SRRM1-216ENST00000489130 TUSC5Q8IXB3 177 aa11.18□□□□□ -0.62
SRRM1-216ENST00000489130 ATP6V1C2Q8NEY4 427 aa11.18□□□□□ -0.62
SRRM1-216ENST00000489130 ZG16BQ96DA0 208 aa11.18□□□□□ -0.62
SRRM1-216ENST00000489130 TRNT1Q96Q11 434 aaKnown RBP11.18□□□□□ -0.62
SRRM1-216ENST00000489130 OR52E6Q96RD3 313 aa11.18□□□□□ -0.62
SRRM1-216ENST00000489130 ZBTB18Q99592 522 aa11.18□□□□□ -0.62
SRRM1-216ENST00000489130 TACO1Q9BSH4 297 aaKnown RBP11.18□□□□□ -0.62
SRRM1-216ENST00000489130 INPP5KQ9BT40 448 aa11.18□□□□□ -0.62
SRRM1-216ENST00000489130 ACTR6Q9GZN1 396 aa11.18□□□□□ -0.62
SRRM1-216ENST00000489130 QRSL1Q9H0R6 528 aaKnown RBP11.18□□□□□ -0.62
SRRM1-216ENST00000489130 C12orf49Q9H741 205 aa11.18□□□□□ -0.62
SRRM1-216ENST00000489130 MANSC1Q9H8J5 431 aa11.18□□□□□ -0.62
SRRM1-216ENST00000489130 BCO1Q9HAY6 547 aa11.18□□□□□ -0.62
SRRM1-216ENST00000489130 TMBIM4Q9HC24 238 aa11.18□□□□□ -0.62
SRRM1-216ENST00000489130 EXOSC3Q9NQT5 275 aaKnown RBP11.18□□□□□ -0.62
SRRM1-216ENST00000489130 DLL4Q9NR61 685 aa11.18□□□□□ -0.62
SRRM1-216ENST00000489130 ACER3Q9NUN7 267 aa11.18□□□□□ -0.62
SRRM1-216ENST00000489130 NKIRAS1Q9NYS0 192 aa11.18□□□□□ -0.62
SRRM1-216ENST00000489130 KLHL9Q9P2J3 617 aa11.18□□□□□ -0.62
SRRM1-216ENST00000489130 ING1Q9UK53 422 aaPredicted RBP11.18□□□□□ -0.62
SRRM1-216ENST00000489130 LIPT1Q9Y234 373 aa11.18□□□□□ -0.62
SRRM1-216ENST00000489130 GPR52Q9Y2T5 361 aa11.18□□□□□ -0.62
SRRM1-216ENST00000489130 IGHV3-15A0A0B4J1V0 119 aa11.17□□□□□ -0.62
SRRM1-216ENST00000489130 KLF11O14901 512 aa11.17□□□□□ -0.62
SRRM1-216ENST00000489130 KLF4O43474 513 aa11.17□□□□□ -0.62
SRRM1-216ENST00000489130 GCM2O75603 506 aaPredicted RBP11.17□□□□□ -0.62
SRRM1-216ENST00000489130 YES1P07947 543 aa11.17□□□□□ -0.62
SRRM1-216ENST00000489130 KITP10721 976 aa11.17□□□□□ -0.62
SRRM1-216ENST00000489130 IDO1P14902 403 aa11.17□□□□□ -0.62
SRRM1-216ENST00000489130 CDKN2CP42773 168 aa11.17□□□□□ -0.62
SRRM1-216ENST00000489130 KCNJ10P78508 379 aa11.17□□□□□ -0.62
SRRM1-216ENST00000489130 CHRNEQ04844 493 aa11.17□□□□□ -0.62
SRRM1-216ENST00000489130 MERTKQ12866 999 aa11.17□□□□□ -0.62
SRRM1-216ENST00000489130 ACKR1Q16570 336 aa11.17□□□□□ -0.62
SRRM1-216ENST00000489130 PDCD4Q53EL6 469 aaKnown RBP11.17□□□□□ -0.62
SRRM1-216ENST00000489130 GPAT3Q53EU6 434 aa11.17□□□□□ -0.62
SRRM1-216ENST00000489130 BEX5Q5H9J7 111 aa11.17□□□□□ -0.62
SRRM1-216ENST00000489130 PLEKHM3Q6ZWE6 761 aa11.17□□□□□ -0.62
SRRM1-216ENST00000489130 NUFIP2Q7Z417 695 aaKnown RBP11.17□□□□□ -0.62
SRRM1-216ENST00000489130 MAVSQ7Z434 540 aa11.17□□□□□ -0.62
SRRM1-216ENST00000489130 GABRG1Q8N1C3 465 aa11.17□□□□□ -0.62
SRRM1-216ENST00000489130 SLC25A43Q8WUT9 341 aaPredicted RBP11.17□□□□□ -0.62
SRRM1-216ENST00000489130 PIGTQ969N2 578 aa11.17□□□□□ -0.62
SRRM1-216ENST00000489130 PIP5K1AQ99755 562 aa11.17□□□□□ -0.62
SRRM1-216ENST00000489130 PSD2Q9BQI7 771 aa11.17□□□□□ -0.62
SRRM1-216ENST00000489130 CCDC106Q9BWC9 280 aa11.17□□□□□ -0.62
SRRM1-216ENST00000489130 SLC38A1Q9H2H9 487 aa11.17□□□□□ -0.62
SRRM1-216ENST00000489130 SERINC1Q9NRX5 453 aa11.17□□□□□ -0.62
SRRM1-216ENST00000489130 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.16□□□□□ -0.62
SRRM1-216ENST00000489130 CLDN24A6NM45 220 aa11.16□□□□□ -0.62
SRRM1-216ENST00000489130 SMAD9O15198 467 aaKnown RBP11.16□□□□□ -0.62
SRRM1-216ENST00000489130 CYTIPO60759 359 aa11.16□□□□□ -0.62
SRRM1-216ENST00000489130 IL6P05231 212 aa11.16□□□□□ -0.62
SRRM1-216ENST00000489130 CHRM4P08173 479 aa11.16□□□□□ -0.62
SRRM1-216ENST00000489130 FOSL1P15407 271 aa11.16□□□□□ -0.62
SRRM1-216ENST00000489130 FPR1P21462 350 aa11.16□□□□□ -0.62
SRRM1-216ENST00000489130 RPS4Y1P22090 263 aaKnown RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms