RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 RAB18Q9NP72 206 aa2.27□□□□□ -2.05
CD46-215ENST00000488596 SLC17A5Q9NRA2 495 aa2.27□□□□□ -2.05
CD46-215ENST00000488596 AATFQ9NY61 560 aaKnown RBP eCLIP2.27□□□□□ -2.05
CD46-215ENST00000488596 B3GNT2Q9NY97 397 aa2.27□□□□□ -2.05
CD46-215ENST00000488596 ERVW-1Q9UQF0 538 aa2.27□□□□□ -2.05
CD46-215ENST00000488596 SCML2Q9UQR0 700 aa2.27□□□□□ -2.05
CD46-215ENST00000488596 PLLPQ9Y342 182 aa2.27□□□□□ -2.05
CD46-215ENST00000488596 MAD1L1Q9Y6D9 718 aa2.27□□□□□ -2.05
CD46-215ENST00000488596 THSD7BQ9C0I4 1608 aa2.27□□□□□ -2.05
CD46-215ENST00000488596 LRRK1Q38SD2 2015 aa2.26□□□□□ -2.05
CD46-215ENST00000488596 IGHV1OR15-1A0A075B7D0 117 aa2.26□□□□□ -2.05
CD46-215ENST00000488596 A0A1B0GWB2 263 aa2.26□□□□□ -2.05
CD46-215ENST00000488596 RS1O15537 224 aa2.26□□□□□ -2.05
CD46-215ENST00000488596 TBX19O60806 448 aa2.26□□□□□ -2.05
CD46-215ENST00000488596 LRATO95237 230 aa2.26□□□□□ -2.05
CD46-215ENST00000488596 ADCY5O95622 1261 aa2.26□□□□□ -2.05
CD46-215ENST00000488596 KRT8P05787 483 aa2.26□□□□□ -2.05
CD46-215ENST00000488596 IQCF3P0C7M6 154 aa2.26□□□□□ -2.05
CD46-215ENST00000488596 NTSP30990 170 aa2.26□□□□□ -2.05
CD46-215ENST00000488596 IFNAR2P48551 515 aa2.26□□□□□ -2.05
CD46-215ENST00000488596 AP3M2P53677 418 aa2.26□□□□□ -2.05
CD46-215ENST00000488596 ZNF45Q02386 682 aa2.26□□□□□ -2.05
CD46-215ENST00000488596 EGFEM1PQ0D2K5 195 aa2.26□□□□□ -2.05
CD46-215ENST00000488596 SLC10A7Q0GE19 358 aa2.26□□□□□ -2.05
CD46-215ENST00000488596 TRIM16LQ309B1 348 aa2.26□□□□□ -2.05
CD46-215ENST00000488596 CFAP221Q4G0U5 840 aa2.26□□□□□ -2.05
CD46-215ENST00000488596 METTL11BQ5VVY1 283 aa2.26□□□□□ -2.05
CD46-215ENST00000488596 FAM71F2Q6NXP2 309 aa2.26□□□□□ -2.05
CD46-215ENST00000488596 CCDC137Q6PK04 289 aaKnown RBP2.26□□□□□ -2.05
CD46-215ENST00000488596 SCARA5Q6ZMJ2 495 aa2.26□□□□□ -2.05
CD46-215ENST00000488596 FAM220AQ7Z4H9 259 aa2.26□□□□□ -2.05
CD46-215ENST00000488596 TPRA1Q86W33 373 aa2.26□□□□□ -2.05
CD46-215ENST00000488596 ERI1Q8IV48 349 aaKnown RBP2.26□□□□□ -2.05
CD46-215ENST00000488596 NRMQ8IXM6 262 aa2.26□□□□□ -2.05
CD46-215ENST00000488596 CLEC4FQ8N1N0 589 aa2.26□□□□□ -2.05
CD46-215ENST00000488596 CLDN19Q8N6F1 224 aa2.26□□□□□ -2.05
CD46-215ENST00000488596 TMEM252Q8N6L7 170 aa2.26□□□□□ -2.05
CD46-215ENST00000488596 GMCL1P1Q8NEA9 526 aa2.26□□□□□ -2.05
CD46-215ENST00000488596 OR2L5Q8NG80 312 aa2.26□□□□□ -2.05
CD46-215ENST00000488596 ANKRD49Q8WVL7 239 aa2.26□□□□□ -2.05
CD46-215ENST00000488596 SLC5A11Q8WWX8 675 aa2.26□□□□□ -2.05
CD46-215ENST00000488596 PELI1Q96FA3 418 aa2.26□□□□□ -2.05
CD46-215ENST00000488596 SH3YL1Q96HL8 342 aaPredicted RBP2.26□□□□□ -2.05
CD46-215ENST00000488596 OMDQ99983 421 aa2.26□□□□□ -2.05
CD46-215ENST00000488596 NICN1Q9BSH3 213 aa2.26□□□□□ -2.05
CD46-215ENST00000488596 SRXN1Q9BYN0 137 aa2.26□□□□□ -2.05
CD46-215ENST00000488596 RHBGQ9H310 441 aa2.26□□□□□ -2.05
CD46-215ENST00000488596 RMND5AQ9H871 391 aa2.26□□□□□ -2.05
CD46-215ENST00000488596 NANSQ9NR45 359 aa2.26□□□□□ -2.05
CD46-215ENST00000488596 IL36GQ9NZH8 169 aa2.26□□□□□ -2.05
CD46-215ENST00000488596 AIPL1Q9NZN9 384 aa2.26□□□□□ -2.05
CD46-215ENST00000488596 EPS15L1Q9UBC2 864 aa2.26□□□□□ -2.05
CD46-215ENST00000488596 WARS2Q9UGM6 360 aaKnown RBP2.26□□□□□ -2.05
CD46-215ENST00000488596 KDRP35968 1356 aa2.25□□□□□ -2.05
CD46-215ENST00000488596 TTC21BQ7Z4L5 1316 aa2.25□□□□□ -2.05
CD46-215ENST00000488596 KIF16BQ96L93 1317 aa2.25□□□□□ -2.05
CD46-215ENST00000488596 CLSPNQ9HAW4 1339 aa2.25□□□□□ -2.05
CD46-215ENST00000488596 A0A0G2JRQ6 117 aa2.25□□□□□ -2.05
CD46-215ENST00000488596 METTL21EPA6NDL7 271 aa2.25□□□□□ -2.05
CD46-215ENST00000488596 NPIPA7E9PJI5 369 aa2.25□□□□□ -2.05
CD46-215ENST00000488596 K7EQM0 130 aa2.25□□□□□ -2.05
CD46-215ENST00000488596 PRRG1O14668 218 aa2.25□□□□□ -2.05
CD46-215ENST00000488596 ANGPT2O15123 496 aa2.25□□□□□ -2.05
CD46-215ENST00000488596 PRKYO43930 277 aa2.25□□□□□ -2.05
CD46-215ENST00000488596 HCN1O60741 890 aa2.25□□□□□ -2.05
CD46-215ENST00000488596 UGT2B17O75795 530 aa2.25□□□□□ -2.05
CD46-215ENST00000488596 ACTL6AO96019 429 aa2.25□□□□□ -2.05
CD46-215ENST00000488596 IGHV3-48P01763 117 aa2.25□□□□□ -2.05
CD46-215ENST00000488596 H2BFMP0C1H6 154 aa2.25□□□□□ -2.05
CD46-215ENST00000488596 NPIPA8P0DM63 369 aa2.25□□□□□ -2.05
CD46-215ENST00000488596 RNH1P13489 461 aaKnown RBP2.25□□□□□ -2.05
CD46-215ENST00000488596 GCFC2P16383 781 aaKnown RBP2.25□□□□□ -2.05
CD46-215ENST00000488596 FUT3P21217 361 aa2.25□□□□□ -2.05
CD46-215ENST00000488596 CD80P33681 288 aa2.25□□□□□ -2.05
CD46-215ENST00000488596 P2RY1P47900 373 aa2.25□□□□□ -2.05
CD46-215ENST00000488596 PRKXP51817 358 aa2.25□□□□□ -2.05
CD46-215ENST00000488596 BIDP55957 195 aa2.25□□□□□ -2.05
CD46-215ENST00000488596 GNB2P62879 340 aa2.25□□□□□ -2.05
CD46-215ENST00000488596 CBX1P83916 185 aa2.25□□□□□ -2.05
CD46-215ENST00000488596 SLC25A52Q3SY17 297 aa2.25□□□□□ -2.05
CD46-215ENST00000488596 PPP1R27Q86WC6 154 aa2.25□□□□□ -2.05
CD46-215ENST00000488596 SKA3Q8IX90 412 aa2.25□□□□□ -2.05
CD46-215ENST00000488596 ZNF100Q8IYN0 542 aa2.25□□□□□ -2.05
CD46-215ENST00000488596 TMEM123Q8N131 208 aa2.25□□□□□ -2.05
CD46-215ENST00000488596 ALLCQ8N6M5 410 aa2.25□□□□□ -2.05
CD46-215ENST00000488596 ZNF540Q8NDQ6 660 aa2.25□□□□□ -2.05
CD46-215ENST00000488596 BBS1Q8NFJ9 593 aa2.25□□□□□ -2.05
CD46-215ENST00000488596 OR56B4Q8NH76 319 aa2.25□□□□□ -2.05
CD46-215ENST00000488596 OR1F12Q8NHA8 337 aa2.25□□□□□ -2.05
CD46-215ENST00000488596 LINC01006Q8NI28 216 aa2.25□□□□□ -2.05
CD46-215ENST00000488596 RAPGEF5Q92565 580 aa2.25□□□□□ -2.05
CD46-215ENST00000488596 PGLYRP4Q96LB8 373 aa2.25□□□□□ -2.05
CD46-215ENST00000488596 ZNF607Q96SK3 696 aa2.25□□□□□ -2.05
CD46-215ENST00000488596 TXN2Q99757 166 aa2.25□□□□□ -2.05
CD46-215ENST00000488596 NAT10Q9H0A0 1025 aaKnown RBP2.25□□□□□ -2.05
CD46-215ENST00000488596 OR51J1Q9H342 316 aa2.25□□□□□ -2.05
CD46-215ENST00000488596 MARCH5Q9NX47 278 aa2.25□□□□□ -2.05
CD46-215ENST00000488596 CD274Q9NZQ7 290 aa2.25□□□□□ -2.05
CD46-215ENST00000488596 RNF14Q9UBS8 474 aa2.25□□□□□ -2.05
CD46-215ENST00000488596 NPIPA1Q9UND3 350 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms