RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 TRIM16LQ309B1 348 aa2.71□□□□□ -1.98
HMGB1P36-201ENST00000487709 CFAP157Q5JU67 520 aa2.71□□□□□ -1.98
HMGB1P36-201ENST00000487709 BEND3Q5T5X7 828 aa2.71□□□□□ -1.98
HMGB1P36-201ENST00000487709 FAM71F2Q6NXP2 309 aa2.71□□□□□ -1.98
HMGB1P36-201ENST00000487709 KCNIP4Q6PIL6 250 aa2.71□□□□□ -1.98
HMGB1P36-201ENST00000487709 CCDC80Q76M96 950 aa2.71□□□□□ -1.98
HMGB1P36-201ENST00000487709 LCA5Q86VQ0 697 aa2.71□□□□□ -1.98
HMGB1P36-201ENST00000487709 C11orf53Q8IXP5 236 aa2.71□□□□□ -1.98
HMGB1P36-201ENST00000487709 CLEC4FQ8N1N0 589 aa2.71□□□□□ -1.98
HMGB1P36-201ENST00000487709 RNF175Q8N4F7 328 aa2.71□□□□□ -1.98
HMGB1P36-201ENST00000487709 OR51G2Q8NGK0 314 aa2.71□□□□□ -1.98
HMGB1P36-201ENST00000487709 RSPH1Q8WYR4 309 aa2.71□□□□□ -1.98
HMGB1P36-201ENST00000487709 HAVCR1Q96D42 359 aa2.71□□□□□ -1.98
HMGB1P36-201ENST00000487709 C16orf74Q96GX8 76 aa2.71□□□□□ -1.98
HMGB1P36-201ENST00000487709 CYP2S1Q96SQ9 504 aa2.71□□□□□ -1.98
HMGB1P36-201ENST00000487709 MCHR1Q99705 422 aa2.71□□□□□ -1.98
HMGB1P36-201ENST00000487709 EBF4Q9BQW3 602 aa2.71□□□□□ -1.98
HMGB1P36-201ENST00000487709 SLC35A5Q9BS91 424 aa2.71□□□□□ -1.98
HMGB1P36-201ENST00000487709 SPATA16Q9BXB7 569 aa2.71□□□□□ -1.98
HMGB1P36-201ENST00000487709 NARFLQ9H6Q4 476 aa2.71□□□□□ -1.98
HMGB1P36-201ENST00000487709 RMND5AQ9H871 391 aa2.71□□□□□ -1.98
HMGB1P36-201ENST00000487709 ZDHHC11Q9H8X9 412 aa2.71□□□□□ -1.98
HMGB1P36-201ENST00000487709 ELOVL3Q9HB03 270 aa2.71□□□□□ -1.98
HMGB1P36-201ENST00000487709 PDFQ9HBH1 243 aa2.71□□□□□ -1.98
HMGB1P36-201ENST00000487709 PALMDQ9NP74 551 aa2.71□□□□□ -1.98
HMGB1P36-201ENST00000487709 RIMS3Q9UJD0 308 aa2.71□□□□□ -1.98
HMGB1P36-201ENST00000487709 CFAP65Q6ZU64 1925 aaKnown RBP2.71□□□□□ -1.98
HMGB1P36-201ENST00000487709 LRRK1Q38SD2 2015 aa2.7□□□□□ -1.98
HMGB1P36-201ENST00000487709 IGHV1OR15-1A0A075B7D0 117 aa2.7□□□□□ -1.98
HMGB1P36-201ENST00000487709 K7EQM0 130 aa2.7□□□□□ -1.98
HMGB1P36-201ENST00000487709 POLR2DO15514 142 aaKnown RBP2.7□□□□□ -1.98
HMGB1P36-201ENST00000487709 LATO43561 262 aa2.7□□□□□ -1.98
HMGB1P36-201ENST00000487709 PRKYO43930 277 aa2.7□□□□□ -1.98
HMGB1P36-201ENST00000487709 MMP23AO75900 390 aa2.7□□□□□ -1.98
HMGB1P36-201ENST00000487709 B3GAT3O94766 335 aa2.7□□□□□ -1.98
HMGB1P36-201ENST00000487709 SLITRK3O94933 977 aa2.7□□□□□ -1.98
HMGB1P36-201ENST00000487709 GNA14O95837 355 aa2.7□□□□□ -1.98
HMGB1P36-201ENST00000487709 IGLV1-47P01700 117 aa2.7□□□□□ -1.98
HMGB1P36-201ENST00000487709 IGLL1P15814 213 aa2.7□□□□□ -1.98
HMGB1P36-201ENST00000487709 DRD5P21918 477 aa2.7□□□□□ -1.98
HMGB1P36-201ENST00000487709 FGF9P31371 208 aaPredicted RBP2.7□□□□□ -1.98
HMGB1P36-201ENST00000487709 UGT1A5P35504 534 aa2.7□□□□□ -1.98
HMGB1P36-201ENST00000487709 IFNAR2P48551 515 aa2.7□□□□□ -1.98
HMGB1P36-201ENST00000487709 PRKXP51817 358 aa2.7□□□□□ -1.98
HMGB1P36-201ENST00000487709 RIPPLY3P57055 190 aa2.7□□□□□ -1.98
HMGB1P36-201ENST00000487709 SELPLGQ14242 412 aa2.7□□□□□ -1.98
HMGB1P36-201ENST00000487709 PDK3Q15120 406 aa2.7□□□□□ -1.98
HMGB1P36-201ENST00000487709 ZNF79Q15937 498 aa2.7□□□□□ -1.98
HMGB1P36-201ENST00000487709 FAM120AOSQ5T036 256 aa2.7□□□□□ -1.98
HMGB1P36-201ENST00000487709 TTC23Q5W5X9 447 aa2.7□□□□□ -1.98
HMGB1P36-201ENST00000487709 ATL3Q6DD88 541 aa2.7□□□□□ -1.98
HMGB1P36-201ENST00000487709 SLC25A24Q6NUK1 477 aa2.7□□□□□ -1.98
HMGB1P36-201ENST00000487709 CXCL17Q6UXB2 119 aa2.7□□□□□ -1.98
HMGB1P36-201ENST00000487709 UTS2BQ765I0 119 aa2.7□□□□□ -1.98
HMGB1P36-201ENST00000487709 VRK2Q86Y07 508 aa2.7□□□□□ -1.98
HMGB1P36-201ENST00000487709 ZNF683Q8IZ20 524 aa2.7□□□□□ -1.98
HMGB1P36-201ENST00000487709 ATP6V0D2Q8N8Y2 350 aa2.7□□□□□ -1.98
HMGB1P36-201ENST00000487709 HTR3CQ8WXA8 447 aa2.7□□□□□ -1.98
HMGB1P36-201ENST00000487709 RAPGEF5Q92565 580 aa2.7□□□□□ -1.98
HMGB1P36-201ENST00000487709 RPL3LQ92901 407 aaKnown RBP2.7□□□□□ -1.98
HMGB1P36-201ENST00000487709 DTNBP1Q96EV8 351 aa2.7□□□□□ -1.98
HMGB1P36-201ENST00000487709 SEC22AQ96IW7 307 aa2.7□□□□□ -1.98
HMGB1P36-201ENST00000487709 CELF6Q96J87 481 aaKnown RBP2.7□□□□□ -1.98
HMGB1P36-201ENST00000487709 IMMP1LQ96LU5 166 aa2.7□□□□□ -1.98
HMGB1P36-201ENST00000487709 NOL4LQ96MY1 436 aaPredicted RBP2.7□□□□□ -1.98
HMGB1P36-201ENST00000487709 TTC25Q96NG3 672 aa2.7□□□□□ -1.98
HMGB1P36-201ENST00000487709 NAP1L5Q96NT1 182 aaPredicted RBP2.7□□□□□ -1.98
HMGB1P36-201ENST00000487709 ZNF607Q96SK3 696 aa2.7□□□□□ -1.98
HMGB1P36-201ENST00000487709 ZNF184Q99676 751 aaPredicted RBP2.7□□□□□ -1.98
HMGB1P36-201ENST00000487709 TEX13BQ9BXU2 312 aa2.7□□□□□ -1.98
HMGB1P36-201ENST00000487709 SRXN1Q9BYN0 137 aa2.7□□□□□ -1.98
HMGB1P36-201ENST00000487709 POLR1EQ9GZS1 481 aaKnown RBP2.7□□□□□ -1.98
HMGB1P36-201ENST00000487709 CALHM2Q9HA72 323 aa2.7□□□□□ -1.98
HMGB1P36-201ENST00000487709 ONECUT1Q9UBC0 465 aa2.7□□□□□ -1.98
HMGB1P36-201ENST00000487709 PHF11Q9UIL8 331 aa2.7□□□□□ -1.98
HMGB1P36-201ENST00000487709 ZNF221Q9UK13 617 aa2.7□□□□□ -1.98
HMGB1P36-201ENST00000487709 UBQLN1Q9UMX0 589 aaKnown RBP2.7□□□□□ -1.98
HMGB1P36-201ENST00000487709 CELA1Q9UNI1 258 aa2.7□□□□□ -1.98
HMGB1P36-201ENST00000487709 SCML2Q9UQR0 700 aa2.7□□□□□ -1.98
HMGB1P36-201ENST00000487709 MRPS33Q9Y291 106 aaKnown RBP2.7□□□□□ -1.98
HMGB1P36-201ENST00000487709 ATP6V0A2Q9Y487 856 aa2.7□□□□□ -1.98
HMGB1P36-201ENST00000487709 C15orf38-AP3S2A0A0A6YYH1 394 aa2.69□□□□□ -1.98
HMGB1P36-201ENST00000487709 A0A1B0GWB2 263 aa2.69□□□□□ -1.98
HMGB1P36-201ENST00000487709 ESYT2A0FGR8 921 aa2.69□□□□□ -1.98
HMGB1P36-201ENST00000487709 TUBAL3A6NHL2 446 aa2.69□□□□□ -1.98
HMGB1P36-201ENST00000487709 F5H6K3 240 aa2.69□□□□□ -1.98
HMGB1P36-201ENST00000487709 H0Y9J4 135 aa2.69□□□□□ -1.98
HMGB1P36-201ENST00000487709 XPO1O14980 1071 aaKnown RBP2.69□□□□□ -1.98
HMGB1P36-201ENST00000487709 SNAPINO95295 136 aa2.69□□□□□ -1.98
HMGB1P36-201ENST00000487709 ALOX5P09917 674 aa2.69□□□□□ -1.98
HMGB1P36-201ENST00000487709 POU2F1P14859 743 aa2.69□□□□□ -1.98
HMGB1P36-201ENST00000487709 IMPDH1P20839 514 aa2.69□□□□□ -1.98
HMGB1P36-201ENST00000487709 CA8P35219 290 aa2.69□□□□□ -1.98
HMGB1P36-201ENST00000487709 DRD3P35462 400 aa2.69□□□□□ -1.98
HMGB1P36-201ENST00000487709 STARP49675 285 aa2.69□□□□□ -1.98
HMGB1P36-201ENST00000487709 RGS4P49798 205 aa2.69□□□□□ -1.98
HMGB1P36-201ENST00000487709 LIM2P55344 173 aa2.69□□□□□ -1.98
HMGB1P36-201ENST00000487709 KLRC3Q07444 240 aa2.69□□□□□ -1.98
HMGB1P36-201ENST00000487709 NCBP1Q09161 790 aaKnown RBP2.69□□□□□ -1.98
HMGB1P36-201ENST00000487709 ASPHQ12797 758 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms