RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 FGL1Q08830 312 aa3.39□□□□□ -1.87
SMC4-218ENST00000486711 KIAA0040Q15053 153 aa3.39□□□□□ -1.87
SMC4-218ENST00000486711 PRR4Q16378 134 aa3.39□□□□□ -1.87
SMC4-218ENST00000486711 TRIM16LQ309B1 348 aa3.39□□□□□ -1.87
SMC4-218ENST00000486711 ATL3Q6DD88 541 aa3.39□□□□□ -1.87
SMC4-218ENST00000486711 CENPPQ6IPU0 288 aa3.39□□□□□ -1.87
SMC4-218ENST00000486711 FAM199XQ6PEV8 388 aaPredicted RBP3.39□□□□□ -1.87
SMC4-218ENST00000486711 TFAP2EQ6VUC0 442 aa3.39□□□□□ -1.87
SMC4-218ENST00000486711 Q6ZPB1 254 aaPredicted RBP3.39□□□□□ -1.87
SMC4-218ENST00000486711 FRA10AC1Q70Z53 315 aa3.39□□□□□ -1.87
SMC4-218ENST00000486711 LCA5Q86VQ0 697 aa3.39□□□□□ -1.87
SMC4-218ENST00000486711 NRMQ8IXM6 262 aa3.39□□□□□ -1.87
SMC4-218ENST00000486711 UBQLNLQ8IYU4 475 aa3.39□□□□□ -1.87
SMC4-218ENST00000486711 ABCA7Q8IZY2 2146 aa3.39□□□□□ -1.87
SMC4-218ENST00000486711 TMEM123Q8N131 208 aa3.39□□□□□ -1.87
SMC4-218ENST00000486711 KIR3DL3Q8N743 410 aa3.39□□□□□ -1.87
SMC4-218ENST00000486711 ATP6V0D2Q8N8Y2 350 aa3.39□□□□□ -1.87
SMC4-218ENST00000486711 OR2A12Q8NGT7 310 aa3.39□□□□□ -1.87
SMC4-218ENST00000486711 ANKRD49Q8WVL7 239 aa3.39□□□□□ -1.87
SMC4-218ENST00000486711 PELI1Q96FA3 418 aa3.39□□□□□ -1.87
SMC4-218ENST00000486711 VSIG2Q96IQ7 327 aa3.39□□□□□ -1.87
SMC4-218ENST00000486711 SLC35A5Q9BS91 424 aa3.39□□□□□ -1.87
SMC4-218ENST00000486711 SMYD3Q9H7B4 428 aa3.39□□□□□ -1.87
SMC4-218ENST00000486711 FANCFQ9NPI8 374 aa3.39□□□□□ -1.87
SMC4-218ENST00000486711 COX16Q9P0S2 106 aa3.39□□□□□ -1.87
SMC4-218ENST00000486711 WARS2Q9UGM6 360 aaKnown RBP3.39□□□□□ -1.87
SMC4-218ENST00000486711 CLEC4EQ9ULY5 219 aa3.39□□□□□ -1.87
SMC4-218ENST00000486711 SCML2Q9UQR0 700 aa3.39□□□□□ -1.87
SMC4-218ENST00000486711 RASD1Q9Y272 281 aa3.39□□□□□ -1.87
SMC4-218ENST00000486711 KDRP35968 1356 aa3.38□□□□□ -1.87
SMC4-218ENST00000486711 PRRC2AP48634 2157 aaKnown RBP3.38□□□□□ -1.87
SMC4-218ENST00000486711 SYNJ2BP-COX16A0A087WUM0 186 aa3.38□□□□□ -1.87
SMC4-218ENST00000486711 FAM168BA1KXE4 195 aa3.38□□□□□ -1.87
SMC4-218ENST00000486711 LRP5LA4QPB2 252 aa3.38□□□□□ -1.87
SMC4-218ENST00000486711 KIF2AO00139 706 aaPredicted RBP3.38□□□□□ -1.87
SMC4-218ENST00000486711 PRRG1O14668 218 aa3.38□□□□□ -1.87
SMC4-218ENST00000486711 TAPBPO15533 448 aa3.38□□□□□ -1.87
SMC4-218ENST00000486711 RS1O15537 224 aa3.38□□□□□ -1.87
SMC4-218ENST00000486711 ZNF208O43345 1280 aa3.38□□□□□ -1.87
SMC4-218ENST00000486711 PRKYO43930 277 aa3.38□□□□□ -1.87
SMC4-218ENST00000486711 SNNO75324 88 aaPredicted RBP3.38□□□□□ -1.87
SMC4-218ENST00000486711 SERF1AO75920 110 aa3.38□□□□□ -1.87
SMC4-218ENST00000486711 GNA14O95837 355 aa3.38□□□□□ -1.87
SMC4-218ENST00000486711 LALBAP00709 142 aa3.38□□□□□ -1.87
SMC4-218ENST00000486711 RNH1P13489 461 aaKnown RBP3.38□□□□□ -1.87
SMC4-218ENST00000486711 CYP2B6P20813 491 aa3.38□□□□□ -1.87
SMC4-218ENST00000486711 FGF9P31371 208 aaPredicted RBP3.38□□□□□ -1.87
SMC4-218ENST00000486711 SSR1P43307 286 aaKnown RBP3.38□□□□□ -1.87
SMC4-218ENST00000486711 KIR2DS2P43631 304 aa3.38□□□□□ -1.87
SMC4-218ENST00000486711 P2RY1P47900 373 aa3.38□□□□□ -1.87
SMC4-218ENST00000486711 TDO2P48775 406 aa3.38□□□□□ -1.87
SMC4-218ENST00000486711 PRKXP51817 358 aa3.38□□□□□ -1.87
SMC4-218ENST00000486711 PLK1P53350 603 aa3.38□□□□□ -1.87
SMC4-218ENST00000486711 CHRNB3Q05901 458 aa3.38□□□□□ -1.87
SMC4-218ENST00000486711 SLC25A52Q3SY17 297 aa3.38□□□□□ -1.87
SMC4-218ENST00000486711 TP53I3Q53FA7 332 aa3.38□□□□□ -1.87
SMC4-218ENST00000486711 OR2B11Q5JQS5 317 aa3.38□□□□□ -1.87
SMC4-218ENST00000486711 TPGS2Q68CL5 300 aa3.38□□□□□ -1.87
SMC4-218ENST00000486711 CCDC137Q6PK04 289 aaKnown RBP3.38□□□□□ -1.87
SMC4-218ENST00000486711 NLRP9Q7RTR0 991 aa3.38□□□□□ -1.87
SMC4-218ENST00000486711 SLC35F2Q8IXU6 374 aa3.38□□□□□ -1.87
SMC4-218ENST00000486711 FAM133AQ8N9E0 248 aa3.38□□□□□ -1.87
SMC4-218ENST00000486711 ZPLD1Q8TCW7 415 aa3.38□□□□□ -1.87
SMC4-218ENST00000486711 BADQ92934 168 aa3.38□□□□□ -1.87
SMC4-218ENST00000486711 NOL4LQ96MY1 436 aaPredicted RBP3.38□□□□□ -1.87
SMC4-218ENST00000486711 RPRD1AQ96P16 312 aaPredicted RBP3.38□□□□□ -1.87
SMC4-218ENST00000486711 RBM14Q96PK6 669 aaKnown RBP3.38□□□□□ -1.87
SMC4-218ENST00000486711 MCHR1Q99705 422 aa3.38□□□□□ -1.87
SMC4-218ENST00000486711 SLC39A3Q9BRY0 314 aa3.38□□□□□ -1.87
SMC4-218ENST00000486711 NIPSNAP3BQ9BS92 247 aa3.38□□□□□ -1.87
SMC4-218ENST00000486711 CNPY3Q9BT09 278 aa3.38□□□□□ -1.87
SMC4-218ENST00000486711 RHBGQ9H310 441 aa3.38□□□□□ -1.87
SMC4-218ENST00000486711 Q9H3A6 140 aa3.38□□□□□ -1.87
SMC4-218ENST00000486711 GLIPR2Q9H4G4 154 aa3.38□□□□□ -1.87
SMC4-218ENST00000486711 RAB18Q9NP72 206 aa3.38□□□□□ -1.87
SMC4-218ENST00000486711 IL36GQ9NZH8 169 aa3.38□□□□□ -1.87
SMC4-218ENST00000486711 Q9UF83 564 aa3.38□□□□□ -1.87
SMC4-218ENST00000486711 PTBP2Q9UKA9 531 aaKnown RBP3.38□□□□□ -1.87
SMC4-218ENST00000486711 CLEC4AQ9UMR7 237 aa3.38□□□□□ -1.87
SMC4-218ENST00000486711 AK6Q9Y3D8 172 aaKnown RBP3.38□□□□□ -1.87
SMC4-218ENST00000486711 IGLV3-10A0A075B6K4 115 aa3.37□□□□□ -1.87
SMC4-218ENST00000486711 CDX4O14627 284 aaPredicted RBP3.37□□□□□ -1.87
SMC4-218ENST00000486711 POLR2DO15514 142 aaKnown RBP3.37□□□□□ -1.87
SMC4-218ENST00000486711 OR8U8P0C7N1 319 aa3.37□□□□□ -1.87
SMC4-218ENST00000486711 OR3A4PP47883 348 aa3.37□□□□□ -1.87
SMC4-218ENST00000486711 CEBPDP49716 269 aaPredicted RBP3.37□□□□□ -1.87
SMC4-218ENST00000486711 DAP3P51398 398 aaKnown RBP3.37□□□□□ -1.87
SMC4-218ENST00000486711 KRTAP10-8P60410 259 aa3.37□□□□□ -1.87
SMC4-218ENST00000486711 RIPK1Q13546 671 aa3.37□□□□□ -1.87
SMC4-218ENST00000486711 AANATQ16613 207 aa3.37□□□□□ -1.87
SMC4-218ENST00000486711 LRRC36Q1X8D7 754 aa3.37□□□□□ -1.87
SMC4-218ENST00000486711 CFAP221Q4G0U5 840 aa3.37□□□□□ -1.87
SMC4-218ENST00000486711 RSBN1Q5VWQ0 802 aaPredicted RBP3.37□□□□□ -1.87
SMC4-218ENST00000486711 ARCQ7LC44 396 aa3.37□□□□□ -1.87
SMC4-218ENST00000486711 TRPM8Q7Z2W7 1104 aa3.37□□□□□ -1.87
SMC4-218ENST00000486711 ZNF677Q86XU0 584 aa3.37□□□□□ -1.87
SMC4-218ENST00000486711 VSTM4Q8IW00 320 aa3.37□□□□□ -1.87
SMC4-218ENST00000486711 ZCCHC7Q8N3Z6 543 aaKnown RBP3.37□□□□□ -1.87
SMC4-218ENST00000486711 OR9A1PQ8NGU1 263 aa3.37□□□□□ -1.87
SMC4-218ENST00000486711 PIGCQ92535 297 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms