RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 ELK4P28324 431 aa10.31□□□□□ -0.76
NUP50-216ENST00000486184 ADH6P28332 368 aa10.31□□□□□ -0.76
NUP50-216ENST00000486184 MSX2P35548 267 aaPredicted RBP10.31□□□□□ -0.76
NUP50-216ENST00000486184 SESN3P58005 492 aa10.31□□□□□ -0.76
NUP50-216ENST00000486184 SELENOWP63302 87 aa10.31□□□□□ -0.76
NUP50-216ENST00000486184 TOMM34Q15785 309 aaPredicted RBP10.31□□□□□ -0.76
NUP50-216ENST00000486184 DUSP7Q16829 419 aa10.31□□□□□ -0.76
NUP50-216ENST00000486184 GLIPR1L2Q4G1C9 344 aa10.31□□□□□ -0.76
NUP50-216ENST00000486184 NHSL2Q5HYW2 709 aa10.31□□□□□ -0.76
NUP50-216ENST00000486184 WBP2NLQ6ICG8 309 aa10.31□□□□□ -0.76
NUP50-216ENST00000486184 POMZP3Q6PJE2 187 aa10.31□□□□□ -0.76
NUP50-216ENST00000486184 CHMP1BQ7LBR1 199 aa10.31□□□□□ -0.76
NUP50-216ENST00000486184 GRINAQ7Z429 371 aa10.31□□□□□ -0.76
NUP50-216ENST00000486184 PM20D2Q8IYS1 436 aa10.31□□□□□ -0.76
NUP50-216ENST00000486184 EID3Q8N140 333 aa10.31□□□□□ -0.76
NUP50-216ENST00000486184 GTPBP8Q8N3Z3 284 aaPredicted RBP10.31□□□□□ -0.76
NUP50-216ENST00000486184 OR52E4Q8NGH9 312 aa10.31□□□□□ -0.76
NUP50-216ENST00000486184 OR5M1Q8NGP8 315 aa10.31□□□□□ -0.76
NUP50-216ENST00000486184 RNF217Q8TC41 542 aa10.31□□□□□ -0.76
NUP50-216ENST00000486184 SMPDL3BQ92485 455 aa10.31□□□□□ -0.76
NUP50-216ENST00000486184 ZNF559Q9BR84 538 aa10.31□□□□□ -0.76
NUP50-216ENST00000486184 UGT2B28Q9BY64 529 aa10.31□□□□□ -0.76
NUP50-216ENST00000486184 TRIM15Q9C019 465 aa10.31□□□□□ -0.76
NUP50-216ENST00000486184 TRIM2Q9C040 744 aa10.31□□□□□ -0.76
NUP50-216ENST00000486184 PCDHAC1Q9H158 963 aa10.31□□□□□ -0.76
NUP50-216ENST00000486184 TMEM27Q9HBJ8 222 aa10.31□□□□□ -0.76
NUP50-216ENST00000486184 ACER3Q9NUN7 267 aa10.31□□□□□ -0.76
NUP50-216ENST00000486184 PRDM4Q9UKN5 801 aa10.31□□□□□ -0.76
NUP50-216ENST00000486184 CAMK2AQ9UQM7 478 aa10.31□□□□□ -0.76
NUP50-216ENST00000486184 ARHGAP21Q5T5U3 1957 aa10.31□□□□□ -0.76
NUP50-216ENST00000486184 KIAA1549Q9HCM3 1950 aa10.31□□□□□ -0.76
NUP50-216ENST00000486184 PRRC2CQ9Y520 2896 aaKnown RBP10.31□□□□□ -0.76
NUP50-216ENST00000486184 FIGNL2A6NMB9 653 aa10.3□□□□□ -0.76
NUP50-216ENST00000486184 GJE1A6NN92 205 aa10.3□□□□□ -0.76
NUP50-216ENST00000486184 H0Y3Z8 333 aa10.3□□□□□ -0.76
NUP50-216ENST00000486184 SEC14L5O43304 696 aa10.3□□□□□ -0.76
NUP50-216ENST00000486184 SLC19A2O60779 497 aa10.3□□□□□ -0.76
NUP50-216ENST00000486184 CXCR1P25024 350 aa10.3□□□□□ -0.76
NUP50-216ENST00000486184 IFNA8P32881 189 aa10.3□□□□□ -0.76
NUP50-216ENST00000486184 APOBEC1P41238 236 aaKnown RBP10.3□□□□□ -0.76
NUP50-216ENST00000486184 SLC1A3P43003 542 aa10.3□□□□□ -0.76
NUP50-216ENST00000486184 POLR2HP52434 150 aaKnown RBP10.3□□□□□ -0.76
NUP50-216ENST00000486184 GFRA1P56159 465 aa10.3□□□□□ -0.76
NUP50-216ENST00000486184 HOXC5Q00444 222 aa10.3□□□□□ -0.76
NUP50-216ENST00000486184 PLAURQ03405 335 aa10.3□□□□□ -0.76
NUP50-216ENST00000486184 SRYQ05066 204 aa10.3□□□□□ -0.76
NUP50-216ENST00000486184 CRYZQ08257 329 aaKnown RBP10.3□□□□□ -0.76
NUP50-216ENST00000486184 SELENBP1Q13228 472 aa10.3□□□□□ -0.76
NUP50-216ENST00000486184 TRIM25Q14258 630 aaKnown RBP10.3□□□□□ -0.76
NUP50-216ENST00000486184 SF3B4Q15427 424 aaKnown RBP eCLIP10.3□□□□□ -0.764e-8■■■■■ 40.5
NUP50-216ENST00000486184 IGFBP7Q16270 282 aa10.3□□□□□ -0.76
NUP50-216ENST00000486184 NRF1Q16656 503 aa10.3□□□□□ -0.76
NUP50-216ENST00000486184 IFI44LQ53G44 452 aa10.3□□□□□ -0.76
NUP50-216ENST00000486184 MTX3Q5HYI7 312 aa10.3□□□□□ -0.76
NUP50-216ENST00000486184 PDSS1Q5T2R2 415 aa10.3□□□□□ -0.76
NUP50-216ENST00000486184 VASNQ6EMK4 673 aa10.3□□□□□ -0.76
NUP50-216ENST00000486184 C3orf33Q6P1S2 294 aa10.3□□□□□ -0.76
NUP50-216ENST00000486184 DEF8Q6ZN54 512 aa10.3□□□□□ -0.76
NUP50-216ENST00000486184 PLEKHM3Q6ZWE6 761 aa10.3□□□□□ -0.76
NUP50-216ENST00000486184 CBLL1Q75N03 491 aa10.3□□□□□ -0.76
NUP50-216ENST00000486184 CARM1Q86X55 608 aa10.3□□□□□ -0.76
NUP50-216ENST00000486184 DHFR2Q86XF0 187 aa10.3□□□□□ -0.76
NUP50-216ENST00000486184 UBQLNLQ8IYU4 475 aa10.3□□□□□ -0.76
NUP50-216ENST00000486184 MEIOBQ8N635 442 aa10.3□□□□□ -0.76
NUP50-216ENST00000486184 ATP6V1C2Q8NEY4 427 aa10.3□□□□□ -0.76
NUP50-216ENST00000486184 GPR32P1Q8NGA4 272 aa10.3□□□□□ -0.76
NUP50-216ENST00000486184 FAM57AQ8TBR7 257 aa10.3□□□□□ -0.76
NUP50-216ENST00000486184 GEMIN6Q8WXD5 167 aaKnown RBP10.3□□□□□ -0.76
NUP50-216ENST00000486184 ASB9Q96DX5 294 aa10.3□□□□□ -0.76
NUP50-216ENST00000486184 HSH2DQ96JZ2 352 aa10.3□□□□□ -0.76
NUP50-216ENST00000486184 CLPTM1LQ96KA5 538 aa10.3□□□□□ -0.76
NUP50-216ENST00000486184 MCHR1Q99705 422 aa10.3□□□□□ -0.76
NUP50-216ENST00000486184 ARHGDIGQ99819 225 aa10.3□□□□□ -0.76
NUP50-216ENST00000486184 LRMDAQ9H2I8 198 aa10.3□□□□□ -0.76
NUP50-216ENST00000486184 GORASP2Q9H8Y8 452 aa10.3□□□□□ -0.76
NUP50-216ENST00000486184 ALKBH4Q9NXW9 302 aa10.3□□□□□ -0.76
NUP50-216ENST00000486184 ACTR3BQ9P1U1 418 aa10.3□□□□□ -0.76
NUP50-216ENST00000486184 SPRR3Q9UBC9 169 aa10.3□□□□□ -0.76
NUP50-216ENST00000486184 TNFRSF10DQ9UBN6 386 aa10.3□□□□□ -0.76
NUP50-216ENST00000486184 SH3BGRL2Q9UJC5 107 aa10.3□□□□□ -0.76
NUP50-216ENST00000486184 OSGIN2Q9Y236 505 aa10.3□□□□□ -0.76
NUP50-216ENST00000486184 ZNF337Q9Y3M9 751 aa10.3□□□□□ -0.76
NUP50-216ENST00000486184 CHST2Q9Y4C5 530 aa10.3□□□□□ -0.76
NUP50-216ENST00000486184 AP4B1Q9Y6B7 739 aa10.3□□□□□ -0.76
NUP50-216ENST00000486184 MPDZO75970 2070 aa10.29□□□□□ -0.76
NUP50-216ENST00000486184 TRGV8A0A0C4DH27 118 aa10.29□□□□□ -0.76
NUP50-216ENST00000486184 ELOA3DA6NLF2 546 aaPredicted RBP10.29□□□□□ -0.76
NUP50-216ENST00000486184 GSC2O15499 205 aa10.29□□□□□ -0.76
NUP50-216ENST00000486184 FMO6PO60774 539 aa10.29□□□□□ -0.76
NUP50-216ENST00000486184 WISP2O76076 250 aa10.29□□□□□ -0.76
NUP50-216ENST00000486184 IFNW1P05000 195 aa10.29□□□□□ -0.76
NUP50-216ENST00000486184 TFPIP10646 304 aa10.29□□□□□ -0.76
NUP50-216ENST00000486184 PRG2P13727 222 aa10.29□□□□□ -0.76
NUP50-216ENST00000486184 GNLYP22749 145 aa10.29□□□□□ -0.76
NUP50-216ENST00000486184 TACR3P29371 465 aa10.29□□□□□ -0.76
NUP50-216ENST00000486184 SLC7A1P30825 629 aa10.29□□□□□ -0.76
NUP50-216ENST00000486184 ACAA2P42765 397 aaKnown RBP10.29□□□□□ -0.76
NUP50-216ENST00000486184 STARP49675 285 aa10.29□□□□□ -0.76
NUP50-216ENST00000486184 CRYBA2P53672 197 aa10.29□□□□□ -0.76
NUP50-216ENST00000486184 B3GALT5-AS1P59052 145 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms