RNA–Protein interactions for RNA: ENST00000486028.1

HMG20B-211, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-211ENST00000486028 OR52P1PQ8NH57 321 aa11.21□□□□□ -0.61
HMG20B-211ENST00000486028 WDR60Q8WVS4 1066 aa11.21□□□□□ -0.61
HMG20B-211ENST00000486028 C10orf82Q8WW14 230 aa11.21□□□□□ -0.61
HMG20B-211ENST00000486028 ST8SIA1Q92185 356 aa11.21□□□□□ -0.61
HMG20B-211ENST00000486028 CNOT9Q92600 299 aaKnown RBP11.21□□□□□ -0.61
HMG20B-211ENST00000486028 ANKRD27Q96NW4 1050 aa11.21□□□□□ -0.61
HMG20B-211ENST00000486028 NPAS1Q99742 590 aa11.21□□□□□ -0.61
HMG20B-211ENST00000486028 CPPED1Q9BRF8 314 aaPredicted RBP11.21□□□□□ -0.61
HMG20B-211ENST00000486028 UCK2Q9BZX2 261 aa11.21□□□□□ -0.61
HMG20B-211ENST00000486028 ARMC7Q9H6L4 198 aa11.21□□□□□ -0.61
HMG20B-211ENST00000486028 BCL2L10Q9HD36 194 aa11.21□□□□□ -0.61
HMG20B-211ENST00000486028 ACER3Q9NUN7 267 aa11.21□□□□□ -0.61
HMG20B-211ENST00000486028 PAQR5Q9NXK6 330 aaPredicted RBP11.21□□□□□ -0.61
HMG20B-211ENST00000486028 CLCF1Q9UBD9 225 aa11.21□□□□□ -0.61
HMG20B-211ENST00000486028 DSPPQ9NZW4 1301 aa11.2□□□□□ -0.62
HMG20B-211ENST00000486028 CLDN24A6NM45 220 aa11.2□□□□□ -0.62
HMG20B-211ENST00000486028 ETV2O00321 342 aaPredicted RBP11.2□□□□□ -0.62
HMG20B-211ENST00000486028 EIF1AYO14602 144 aaKnown RBP11.2□□□□□ -0.62
HMG20B-211ENST00000486028 ADAMDEC1O15204 470 aa11.2□□□□□ -0.62
HMG20B-211ENST00000486028 SLC22A2O15244 555 aa11.2□□□□□ -0.62
HMG20B-211ENST00000486028 CCDC22O60826 627 aa11.2□□□□□ -0.62
HMG20B-211ENST00000486028 BCAS1O75363 584 aaPredicted RBP11.2□□□□□ -0.62
HMG20B-211ENST00000486028 PGM3O95394 542 aa11.2□□□□□ -0.62
HMG20B-211ENST00000486028 NTN1O95631 604 aa11.2□□□□□ -0.62
HMG20B-211ENST00000486028 IL18BPO95998 194 aa11.2□□□□□ -0.62
HMG20B-211ENST00000486028 OPN1LWP04000 364 aa11.2□□□□□ -0.62
HMG20B-211ENST00000486028 THBS1P07996 1170 aa11.2□□□□□ -0.62
HMG20B-211ENST00000486028 RYKP34925 604 aa11.2□□□□□ -0.62
HMG20B-211ENST00000486028 OPRM1P35372 400 aa11.2□□□□□ -0.62
HMG20B-211ENST00000486028 EIF1AXP47813 144 aaKnown RBP11.2□□□□□ -0.62
HMG20B-211ENST00000486028 CARD18P57730 90 aa11.2□□□□□ -0.62
HMG20B-211ENST00000486028 SESN3P58005 492 aa11.2□□□□□ -0.62
HMG20B-211ENST00000486028 CDK6Q00534 326 aa11.2□□□□□ -0.62
HMG20B-211ENST00000486028 CYLC2Q14093 348 aaPredicted RBP11.2□□□□□ -0.62
HMG20B-211ENST00000486028 SNCBQ16143 134 aa11.2□□□□□ -0.62
HMG20B-211ENST00000486028 MMEL1Q495T6 779 aa11.2□□□□□ -0.62
HMG20B-211ENST00000486028 GKAP1Q5VSY0 366 aaPredicted RBP11.2□□□□□ -0.62
HMG20B-211ENST00000486028 HBMQ6B0K9 141 aa11.2□□□□□ -0.62
HMG20B-211ENST00000486028 OR2A2Q6IF42 318 aa11.2□□□□□ -0.62
HMG20B-211ENST00000486028 REEP3Q6NUK4 255 aa11.2□□□□□ -0.62
HMG20B-211ENST00000486028 ESPNLQ6ZVH7 1005 aa11.2□□□□□ -0.62
HMG20B-211ENST00000486028 SPATA21Q7Z572 469 aa11.2□□□□□ -0.62
HMG20B-211ENST00000486028 KRT73Q86Y46 540 aa11.2□□□□□ -0.62
HMG20B-211ENST00000486028 ATP6V1C2Q8NEY4 427 aa11.2□□□□□ -0.62
HMG20B-211ENST00000486028 ZNF563Q8TA94 476 aa11.2□□□□□ -0.62
HMG20B-211ENST00000486028 BBS10Q8TAM1 723 aa11.2□□□□□ -0.62
HMG20B-211ENST00000486028 MAL2Q969L2 176 aa11.2□□□□□ -0.62
HMG20B-211ENST00000486028 CGREF1Q99674 301 aa11.2□□□□□ -0.62
HMG20B-211ENST00000486028 ELAC2Q9BQ52 826 aaKnown RBP11.2□□□□□ -0.62
HMG20B-211ENST00000486028 PINK1Q9BXM7 581 aa11.2□□□□□ -0.62
HMG20B-211ENST00000486028 NSRP1Q9H0G5 558 aaKnown RBP11.2□□□□□ -0.62
HMG20B-211ENST00000486028 TMEM185BQ9H7F4 350 aa11.2□□□□□ -0.62
HMG20B-211ENST00000486028 TIGARQ9NQ88 270 aa11.2□□□□□ -0.62
HMG20B-211ENST00000486028 SERINC1Q9NRX5 453 aa11.2□□□□□ -0.62
HMG20B-211ENST00000486028 IFT52Q9Y366 437 aa11.2□□□□□ -0.62
HMG20B-211ENST00000486028 ZNF175Q9Y473 711 aa11.2□□□□□ -0.62
HMG20B-211ENST00000486028 CACNA1CQ13936 2221 aa11.2□□□□□ -0.62
HMG20B-211ENST00000486028 UNC79Q9P2D8 2635 aa11.2□□□□□ -0.62
HMG20B-211ENST00000486028 LOC100653049A0A140TA62 436 aa11.19□□□□□ -0.62
HMG20B-211ENST00000486028 NKX2-6A6NCS4 301 aa11.19□□□□□ -0.62
HMG20B-211ENST00000486028 CCT8L1PA6NM43 557 aa11.19□□□□□ -0.62
HMG20B-211ENST00000486028 BBIP1A8MTZ0 92 aa11.19□□□□□ -0.62
HMG20B-211ENST00000486028 FBP2O00757 339 aa11.19□□□□□ -0.62
HMG20B-211ENST00000486028 HNRNPRO43390 633 aaKnown RBP11.19□□□□□ -0.62
HMG20B-211ENST00000486028 KRT34O76011 436 aa11.19□□□□□ -0.62
HMG20B-211ENST00000486028 SYNGR4O95473 234 aa11.19□□□□□ -0.62
HMG20B-211ENST00000486028 TGM6O95932 706 aa11.19□□□□□ -0.62
HMG20B-211ENST00000486028 NPPAP01160 153 aa11.19□□□□□ -0.62
HMG20B-211ENST00000486028 ARAFP10398 606 aa11.19□□□□□ -0.62
HMG20B-211ENST00000486028 COX6B1P14854 86 aa11.19□□□□□ -0.62
HMG20B-211ENST00000486028 UQCRBP14927 111 aa11.19□□□□□ -0.62
HMG20B-211ENST00000486028 ETS2P15036 469 aa11.19□□□□□ -0.62
HMG20B-211ENST00000486028 IL11P20809 199 aa11.19□□□□□ -0.62
HMG20B-211ENST00000486028 BMP5P22003 454 aa11.19□□□□□ -0.62
HMG20B-211ENST00000486028 SLC6A2P23975 617 aa11.19□□□□□ -0.62
HMG20B-211ENST00000486028 ZNF136P52737 540 aa11.19□□□□□ -0.62
HMG20B-211ENST00000486028 MERTKQ12866 999 aa11.19□□□□□ -0.62
HMG20B-211ENST00000486028 SELENBP1Q13228 472 aa11.19□□□□□ -0.62
HMG20B-211ENST00000486028 TMEM176BQ3YBM2 270 aaPredicted RBP11.19□□□□□ -0.62
HMG20B-211ENST00000486028 COQ5Q5HYK3 327 aa11.19□□□□□ -0.62
HMG20B-211ENST00000486028 RPS26P11Q5JNZ5 115 aaPredicted RBP11.19□□□□□ -0.62
HMG20B-211ENST00000486028 MRPL2Q5T653 305 aaKnown RBP11.19□□□□□ -0.62
HMG20B-211ENST00000486028 PLXDC2Q6UX71 529 aa11.19□□□□□ -0.62
HMG20B-211ENST00000486028 CPLX4Q7Z7G2 160 aa11.19□□□□□ -0.62
HMG20B-211ENST00000486028 SNX32Q86XE0 403 aa11.19□□□□□ -0.62
HMG20B-211ENST00000486028 VRK2Q86Y07 508 aa11.19□□□□□ -0.62
HMG20B-211ENST00000486028 PCYOX1LQ8NBM8 494 aa11.19□□□□□ -0.62
HMG20B-211ENST00000486028 NAXEQ8NCW5 288 aa11.19□□□□□ -0.62
HMG20B-211ENST00000486028 OR10D3Q8NH80 312 aa11.19□□□□□ -0.62
HMG20B-211ENST00000486028 OR2V1Q8NHB1 315 aa11.19□□□□□ -0.62
HMG20B-211ENST00000486028 NFKBIDQ8NI38 313 aa11.19□□□□□ -0.62
HMG20B-211ENST00000486028 OSTF1Q92882 214 aa11.19□□□□□ -0.62
HMG20B-211ENST00000486028 ZNF524Q96C55 264 aa11.19□□□□□ -0.62
HMG20B-211ENST00000486028 INTS12Q96CB8 462 aaKnown RBP11.19□□□□□ -0.62
HMG20B-211ENST00000486028 LRRC46Q96FV0 321 aa11.19□□□□□ -0.62
HMG20B-211ENST00000486028 KLHL15Q96M94 604 aa11.19□□□□□ -0.62
HMG20B-211ENST00000486028 SH3GL1Q99961 368 aa11.19□□□□□ -0.62
HMG20B-211ENST00000486028 SFXN3Q9BWM7 321 aa11.19□□□□□ -0.62
HMG20B-211ENST00000486028 PRR14Q9BWN1 585 aa11.19□□□□□ -0.62
HMG20B-211ENST00000486028 SPATA9Q9BWV2 254 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms