RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 ZNF136P52737 540 aa5.14□□□□□ -1.59
CUX1-208ENST00000485792 SUCLG1P53597 346 aaKnown RBP5.14□□□□□ -1.59
CUX1-208ENST00000485792 AQP5P55064 265 aa5.14□□□□□ -1.59
CUX1-208ENST00000485792 ZNF117Q03924 483 aa5.14□□□□□ -1.59
CUX1-208ENST00000485792 SF3A3Q12874 501 aaKnown RBP eCLIP5.14□□□□□ -1.59
CUX1-208ENST00000485792 FOXF2Q12947 444 aa5.14□□□□□ -1.59
CUX1-208ENST00000485792 TP53BP2Q13625 1128 aa5.14□□□□□ -1.59
CUX1-208ENST00000485792 SNTB1Q13884 538 aaKnown RBP5.14□□□□□ -1.59
CUX1-208ENST00000485792 SF3B4Q15427 424 aaKnown RBP eCLIP5.14□□□□□ -1.59
CUX1-208ENST00000485792 ADRM1Q16186 407 aa5.14□□□□□ -1.59
CUX1-208ENST00000485792 PAGE3Q5JUK9 113 aa5.14□□□□□ -1.59
CUX1-208ENST00000485792 PRAMEF8Q5VWM4 474 aa5.14□□□□□ -1.59
CUX1-208ENST00000485792 PRAMEF7Q5VXH5 474 aa5.14□□□□□ -1.59
CUX1-208ENST00000485792 SP5Q6BEB4 398 aaPredicted RBP5.14□□□□□ -1.59
CUX1-208ENST00000485792 LRFN4Q6PJG9 635 aa5.14□□□□□ -1.59
CUX1-208ENST00000485792 ENPP6Q6UWR7 440 aa5.14□□□□□ -1.59
CUX1-208ENST00000485792 LRRC74BQ6ZQY2 392 aa5.14□□□□□ -1.59
CUX1-208ENST00000485792 IFNEQ86WN2 208 aa5.14□□□□□ -1.59
CUX1-208ENST00000485792 GRAMD2AQ8IUY3 354 aa5.14□□□□□ -1.59
CUX1-208ENST00000485792 CCDC71Q8IV32 467 aaPredicted RBP5.14□□□□□ -1.59
CUX1-208ENST00000485792 MIER2Q8N344 545 aa5.14□□□□□ -1.59
CUX1-208ENST00000485792 C9orf106Q8NAJ2 232 aa5.14□□□□□ -1.59
CUX1-208ENST00000485792 TNIP2Q8NFZ5 429 aa5.14□□□□□ -1.59
CUX1-208ENST00000485792 OR4A15Q8NGL6 344 aa5.14□□□□□ -1.59
CUX1-208ENST00000485792 ASB5Q8WWX0 329 aa5.14□□□□□ -1.59
CUX1-208ENST00000485792 RAB8BQ92930 207 aa5.14□□□□□ -1.59
CUX1-208ENST00000485792 ZBTB8AQ96BR9 441 aa5.14□□□□□ -1.59
CUX1-208ENST00000485792 ROPN1LQ96C74 230 aa5.14□□□□□ -1.59
CUX1-208ENST00000485792 DTNBP1Q96EV8 351 aa5.14□□□□□ -1.59
CUX1-208ENST00000485792 SLC35G5Q96KT7 338 aa5.14□□□□□ -1.59
CUX1-208ENST00000485792 FANCD2OSQ96PS1 177 aa5.14□□□□□ -1.59
CUX1-208ENST00000485792 TUBA1CQ9BQE3 449 aa5.14□□□□□ -1.59
CUX1-208ENST00000485792 SLC35A5Q9BS91 424 aa5.14□□□□□ -1.59
CUX1-208ENST00000485792 KRTAP4-6Q9BYQ5 205 aa5.14□□□□□ -1.59
CUX1-208ENST00000485792 UCK2Q9BZX2 261 aa5.14□□□□□ -1.59
CUX1-208ENST00000485792 LAT2Q9GZY6 243 aa5.14□□□□□ -1.59
CUX1-208ENST00000485792 OR51I1Q9H343 314 aa5.14□□□□□ -1.59
CUX1-208ENST00000485792 LDAHQ9H6V9 325 aa5.14□□□□□ -1.59
CUX1-208ENST00000485792 PTGES2Q9H7Z7 377 aa5.14□□□□□ -1.59
CUX1-208ENST00000485792 COQ10BQ9H8M1 238 aa5.14□□□□□ -1.59
CUX1-208ENST00000485792 TPT1P8Q9HAU6 139 aa5.14□□□□□ -1.59
CUX1-208ENST00000485792 CHST11Q9NPF2 352 aa5.14□□□□□ -1.59
CUX1-208ENST00000485792 MED4Q9NPJ6 270 aa5.14□□□□□ -1.59
CUX1-208ENST00000485792 EXOSC3Q9NQT5 275 aaKnown RBP5.14□□□□□ -1.59
CUX1-208ENST00000485792 MED17Q9NVC6 651 aa5.14□□□□□ -1.59
CUX1-208ENST00000485792 PPP4R1LQ9P1A2 415 aa5.14□□□□□ -1.59
CUX1-208ENST00000485792 ING1Q9UK53 422 aaPredicted RBP5.14□□□□□ -1.59
CUX1-208ENST00000485792 ACAD8Q9UKU7 415 aa5.14□□□□□ -1.59
CUX1-208ENST00000485792 PCDHGB4Q9UN71 923 aa5.14□□□□□ -1.59
CUX1-208ENST00000485792 FAF1Q9UNN5 650 aaPredicted RBP5.14□□□□□ -1.59
CUX1-208ENST00000485792 USP22Q9UPT9 525 aa5.14□□□□□ -1.59
CUX1-208ENST00000485792 L3MBTL1Q9Y468 752 aa5.14□□□□□ -1.59
CUX1-208ENST00000485792 PCDHB14Q9Y5E9 798 aa5.14□□□□□ -1.59
CUX1-208ENST00000485792 SNX8Q9Y5X2 465 aa5.14□□□□□ -1.59
CUX1-208ENST00000485792 AP4B1Q9Y6B7 739 aa5.14□□□□□ -1.59
CUX1-208ENST00000485792 ZANQ9Y493 2812 aa5.13□□□□□ -1.59
CUX1-208ENST00000485792 C15orf38-AP3S2A0A0A6YYH1 394 aa5.13□□□□□ -1.59
CUX1-208ENST00000485792 A0A1W2PP18 115 aa5.13□□□□□ -1.59
CUX1-208ENST00000485792 SERINC4A6NH21 518 aa5.13□□□□□ -1.59
CUX1-208ENST00000485792 HSPB2A8KAH6 182 aa5.13□□□□□ -1.59
CUX1-208ENST00000485792 ZNF814B7Z6K7 855 aa5.13□□□□□ -1.59
CUX1-208ENST00000485792 FAM47E-STBD1D6RA91 191 aa5.13□□□□□ -1.59
CUX1-208ENST00000485792 FBP2O00757 339 aa5.13□□□□□ -1.59
CUX1-208ENST00000485792 SCDO00767 359 aa5.13□□□□□ -1.59
CUX1-208ENST00000485792 RFXANKO14593 260 aa5.13□□□□□ -1.59
CUX1-208ENST00000485792 POLR3GO15318 223 aaPredicted RBP5.13□□□□□ -1.59
CUX1-208ENST00000485792 ZNF264O43296 627 aa5.13□□□□□ -1.59
CUX1-208ENST00000485792 GMFGO60234 142 aa5.13□□□□□ -1.59
CUX1-208ENST00000485792 DIAPH2O60879 1101 aa5.13□□□□□ -1.59
CUX1-208ENST00000485792 TRAPPC6AO75865 159 aa5.13□□□□□ -1.59
CUX1-208ENST00000485792 CPSF4O95639 269 aaKnown RBP5.13□□□□□ -1.59
CUX1-208ENST00000485792 TGM6O95932 706 aa5.13□□□□□ -1.59
CUX1-208ENST00000485792 CGAP01215 116 aa5.13□□□□□ -1.59
CUX1-208ENST00000485792 GSNP06396 782 aa5.13□□□□□ -1.59
CUX1-208ENST00000485792 PRKCAP17252 672 aa5.13□□□□□ -1.59
CUX1-208ENST00000485792 ELK4P28324 431 aa5.13□□□□□ -1.59
CUX1-208ENST00000485792 ADSLP30566 484 aaPredicted RBP5.13□□□□□ -1.59
CUX1-208ENST00000485792 EIF1P41567 113 aaKnown RBP5.13□□□□□ -1.59
CUX1-208ENST00000485792 SLC6A8P48029 635 aa5.13□□□□□ -1.59
CUX1-208ENST00000485792 CLK3P49761 638 aaKnown RBP5.13□□□□□ -1.59
CUX1-208ENST00000485792 GZMMP51124 257 aa5.13□□□□□ -1.59
CUX1-208ENST00000485792 GYS2P54840 703 aa5.13□□□□□ -1.59
CUX1-208ENST00000485792 CLDN20P56880 219 aa5.13□□□□□ -1.59
CUX1-208ENST00000485792 CHRNEQ04844 493 aa5.13□□□□□ -1.59
CUX1-208ENST00000485792 FADDQ13158 208 aa5.13□□□□□ -1.59
CUX1-208ENST00000485792 STX5Q13190 355 aa5.13□□□□□ -1.59
CUX1-208ENST00000485792 RGNQ15493 299 aa5.13□□□□□ -1.59
CUX1-208ENST00000485792 HSPB2Q16082 182 aa5.13□□□□□ -1.59
CUX1-208ENST00000485792 SYPL1Q16563 259 aa5.13□□□□□ -1.59
CUX1-208ENST00000485792 SLC25A35Q3KQZ1 300 aa5.13□□□□□ -1.59
CUX1-208ENST00000485792 TIGD2Q4W5G0 525 aa5.13□□□□□ -1.59
CUX1-208ENST00000485792 PDZK1Q5T2W1 519 aa5.13□□□□□ -1.59
CUX1-208ENST00000485792 TNFAIP8L2Q6P589 184 aaPredicted RBP5.13□□□□□ -1.59
CUX1-208ENST00000485792 AAGABQ6PD74 315 aa5.13□□□□□ -1.59
CUX1-208ENST00000485792 SLC2A7Q6PXP3 512 aa5.13□□□□□ -1.59
CUX1-208ENST00000485792 SEZ6L2Q6UXD5 910 aa5.13□□□□□ -1.59
CUX1-208ENST00000485792 RNF130Q86XS8 419 aa5.13□□□□□ -1.59
CUX1-208ENST00000485792 WDFY1Q8IWB7 410 aa5.13□□□□□ -1.59
CUX1-208ENST00000485792 CMIPQ8IY22 773 aa5.13□□□□□ -1.59
CUX1-208ENST00000485792 TRIML2Q8N7C3 387 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms